RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 NEMFO60524 1076 aa22.92■■□□□ 1.26
SS18-224ENST00000584083 STBD1O95210 358 aa22.92■■□□□ 1.26
SS18-224ENST00000584083 P4HBP07237 508 aaKnown RBP22.92■■□□□ 1.26
SS18-224ENST00000584083 NLRP11P59045 1033 aaKnown RBP22.92■■□□□ 1.26
SS18-224ENST00000584083 GNL2Q13823 731 aaKnown RBP22.92■■□□□ 1.26
SS18-224ENST00000584083 EPHA7Q15375 998 aa22.92■■□□□ 1.26
SS18-224ENST00000584083 RTN4RL1Q86UN2 441 aaPredicted RBP22.92■■□□□ 1.26
SS18-224ENST00000584083 FBXO18Q8NFZ0 1043 aa22.92■■□□□ 1.26
SS18-224ENST00000584083 SP7Q8TDD2 431 aaPredicted RBP22.92■■□□□ 1.26
SS18-224ENST00000584083 TMEM40Q8WWA1 233 aa22.92■■□□□ 1.26
SS18-224ENST00000584083 LINC01599Q8WXQ3 324 aa22.92■■□□□ 1.26
SS18-224ENST00000584083 SH2D3AQ9BRG2 576 aa22.92■■□□□ 1.26
SS18-224ENST00000584083 ERVK-5Q9HDB9 667 aa22.92■■□□□ 1.26
SS18-224ENST00000584083 PCDHA12Q9UN75 941 aa22.92■■□□□ 1.26
SS18-224ENST00000584083 COL4A4P53420 1690 aaPredicted RBP22.91■■□□□ 1.26
SS18-224ENST00000584083 GPR182O15218 404 aa22.91■■□□□ 1.26
SS18-224ENST00000584083 GPR32O75388 356 aa22.91■■□□□ 1.26
SS18-224ENST00000584083 GRB10Q13322 594 aa22.91■■□□□ 1.26
SS18-224ENST00000584083 LINC01465Q8N7H1 131 aa22.91■■□□□ 1.26
SS18-224ENST00000584083 IL27Q8NEV9 243 aa22.91■■□□□ 1.26
SS18-224ENST00000584083 SCLT1Q96NL6 688 aa22.91■■□□□ 1.26
SS18-224ENST00000584083 C17orf80Q9BSJ5 609 aa22.91■■□□□ 1.26
SS18-224ENST00000584083 TMX1Q9H3N1 280 aa22.91■■□□□ 1.26
SS18-224ENST00000584083 ST3GAL5Q9UNP4 418 aa22.91■■□□□ 1.26
SS18-224ENST00000584083 PRRC2BQ5JSZ5 2229 aaKnown RBP22.91■■□□□ 1.26
SS18-224ENST00000584083 NLRC5Q86WI3 1866 aa22.91■■□□□ 1.26
SS18-224ENST00000584083 WNT7AO00755 349 aa22.9■■□□□ 1.26
SS18-224ENST00000584083 IBSPP21815 317 aaPredicted RBP22.9■■□□□ 1.26
SS18-224ENST00000584083 DNM2P50570 870 aa22.9■■□□□ 1.26
SS18-224ENST00000584083 PLA2G4FQ68DD2 849 aa22.9■■□□□ 1.26
SS18-224ENST00000584083 ANO5Q75V66 913 aa22.9■■□□□ 1.26
SS18-224ENST00000584083 ZNF710Q8N1W2 664 aa22.9■■□□□ 1.26
SS18-224ENST00000584083 GDPD5Q8WTR4 605 aa22.9■■□□□ 1.26
SS18-224ENST00000584083 ZNF668Q96K58 619 aaPredicted RBP22.9■■□□□ 1.26
SS18-224ENST00000584083 TBC1D32Q96NH3 1257 aa22.9■■□□□ 1.26
SS18-224ENST00000584083 TSPYL2Q9H2G4 693 aaPredicted RBP22.9■■□□□ 1.26
SS18-224ENST00000584083 FOXP1Q9H334 677 aaPredicted RBP22.9■■□□□ 1.26
SS18-224ENST00000584083 TTC12Q9H892 705 aaPredicted RBP22.9■■□□□ 1.26
SS18-224ENST00000584083 RGL1Q9NZL6 768 aa22.9■■□□□ 1.26
SS18-224ENST00000584083 MTCH2Q9Y6C9 303 aa22.9■■□□□ 1.26
SS18-224ENST00000584083 TRANK1O15050 2925 aa22.9■■□□□ 1.26
SS18-224ENST00000584083 PRUNE2Q8WUY3 3088 aa22.9■■□□□ 1.26
SS18-224ENST00000584083 DENND3A2RUS2 1198 aa22.89■■□□□ 1.25
SS18-224ENST00000584083 MCM7P33993 719 aa22.89■■□□□ 1.25
SS18-224ENST00000584083 TXKP42681 527 aa22.89■■□□□ 1.25
SS18-224ENST00000584083 FIBCD1Q8N539 461 aa22.89■■□□□ 1.25
SS18-224ENST00000584083 FBXO22Q8NEZ5 403 aa22.89■■□□□ 1.25
SS18-224ENST00000584083 DYDC2Q96IM9 177 aa22.89■■□□□ 1.25
SS18-224ENST00000584083 LXNQ9BS40 222 aa22.89■■□□□ 1.25
SS18-224ENST00000584083 ADAMTS10Q9H324 1103 aa22.89■■□□□ 1.25
SS18-224ENST00000584083 STAG3L1P0CL83 205 aa22.88■■□□□ 1.25
SS18-224ENST00000584083 POU3F3P20264 500 aaPredicted RBP22.88■■□□□ 1.25
SS18-224ENST00000584083 CYP4A11Q02928 519 aa22.88■■□□□ 1.25
SS18-224ENST00000584083 SPIRE1Q08AE8 756 aa22.88■■□□□ 1.25
SS18-224ENST00000584083 DRP2Q13474 957 aa22.88■■□□□ 1.25
SS18-224ENST00000584083 FAM43BQ6ZT52 329 aaPredicted RBP22.88■■□□□ 1.25
SS18-224ENST00000584083 FAM228AQ86W67 206 aa22.88■■□□□ 1.25
SS18-224ENST00000584083 NPAS4Q8IUM7 802 aa22.88■■□□□ 1.25
SS18-224ENST00000584083 NLRP7Q8WX94 980 aa22.88■■□□□ 1.25
SS18-224ENST00000584083 TMX3Q96JJ7 454 aa22.88■■□□□ 1.25
SS18-224ENST00000584083 SAMD11Q96NU1 681 aa22.88■■□□□ 1.25
SS18-224ENST00000584083 CEP89Q96ST8 783 aa22.88■■□□□ 1.25
SS18-224ENST00000584083 ADAM2Q99965 735 aa22.88■■□□□ 1.25
SS18-224ENST00000584083 JPH2Q9BR39 696 aaPredicted RBP22.88■■□□□ 1.25
SS18-224ENST00000584083 CYP26B1Q9NR63 512 aa22.88■■□□□ 1.25
SS18-224ENST00000584083 WRAP73Q9P2S5 460 aaPredicted RBP22.88■■□□□ 1.25
SS18-224ENST00000584083 LRFN2Q9ULH4 789 aa22.88■■□□□ 1.25
SS18-224ENST00000584083 KIF3AQ9Y496 699 aa22.88■■□□□ 1.25
SS18-224ENST00000584083 MGEA5O60502 916 aa22.87■■□□□ 1.25
SS18-224ENST00000584083 LPXNO60711 386 aa22.87■■□□□ 1.25
SS18-224ENST00000584083 MAFO75444 373 aaPredicted RBP22.87■■□□□ 1.25
SS18-224ENST00000584083 EIF4BP23588 611 aaKnown RBP22.87■■□□□ 1.25
SS18-224ENST00000584083 GPC3P51654 580 aa22.87■■□□□ 1.25
SS18-224ENST00000584083 NPEPPSP55786 919 aa22.87■■□□□ 1.25
SS18-224ENST00000584083 BTG3Q14201 252 aaPredicted RBP22.87■■□□□ 1.25
SS18-224ENST00000584083 CTTNQ14247 550 aaKnown RBP22.87■■□□□ 1.25
SS18-224ENST00000584083 TPH2Q8IWU9 490 aa22.87■■□□□ 1.25
SS18-224ENST00000584083 C4orf19Q8IY42 314 aa22.87■■□□□ 1.25
SS18-224ENST00000584083 CEP170P1Q96L14 293 aa22.87■■□□□ 1.25
SS18-224ENST00000584083 MTMR9Q96QG7 549 aa22.87■■□□□ 1.25
SS18-224ENST00000584083 ZSWIM4Q9H7M6 989 aa22.87■■□□□ 1.25
SS18-224ENST00000584083 PRDM6Q9NQX0 595 aa22.87■■□□□ 1.25
SS18-224ENST00000584083 RALGAPA2Q2PPJ7 1873 aa22.87■■□□□ 1.25
SS18-224ENST00000584083 ADGRA3Q8IWK6 1321 aa22.86■■□□□ 1.25
SS18-224ENST00000584083 DGKIO75912 1065 aa22.86■■□□□ 1.25
SS18-224ENST00000584083 CD2BP2O95400 341 aaKnown RBP22.86■■□□□ 1.25
SS18-224ENST00000584083 YWHABP31946 246 aaKnown RBP22.86■■□□□ 1.25
SS18-224ENST00000584083 MCM2P49736 904 aa22.86■■□□□ 1.25
SS18-224ENST00000584083 SKIV2LQ15477 1246 aaKnown RBP22.86■■□□□ 1.25
SS18-224ENST00000584083 ZNF174Q15697 407 aa22.86■■□□□ 1.25
SS18-224ENST00000584083 EPC2Q52LR7 807 aa22.86■■□□□ 1.25
SS18-224ENST00000584083 OTUD6AQ7L8S5 288 aa22.86■■□□□ 1.25
SS18-224ENST00000584083 NOSTRINQ8IVI9 506 aa22.86■■□□□ 1.25
SS18-224ENST00000584083 TMEM192Q8IY95 271 aa22.86■■□□□ 1.25
SS18-224ENST00000584083 EIF2AK1Q9BQI3 630 aaKnown RBP22.86■■□□□ 1.25
SS18-224ENST00000584083 TMEM60Q9H2L4 133 aa22.86■■□□□ 1.25
SS18-224ENST00000584083 C1orf112Q9NSG2 853 aa22.86■■□□□ 1.25
SS18-224ENST00000584083 SUCLA2Q9P2R7 463 aaPredicted RBP22.86■■□□□ 1.25
SS18-224ENST00000584083 PCDHB7Q9Y5E2 793 aa22.86■■□□□ 1.25
SS18-224ENST00000584083 COL4A6Q14031 1691 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms