RNA–Protein interactions for RNA: ENST00000580074.1

ERBB2-210, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 754 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-210ENST00000580074 SEPT9Q9UHD8 586 aaPredicted RBP13.14□□□□□ -0.31
ERBB2-210ENST00000580074 PCDHB7Q9Y5E2 793 aa13.14□□□□□ -0.31
ERBB2-210ENST00000580074 LOXHD1Q8IVV2 1947 aa13.13□□□□□ -0.31
ERBB2-210ENST00000580074 FSD2A1L4K1 749 aa13.13□□□□□ -0.31
ERBB2-210ENST00000580074 C5orf67F2Z3F1 127 aa13.13□□□□□ -0.31
ERBB2-210ENST00000580074 DGKIO75912 1065 aa13.13□□□□□ -0.31
ERBB2-210ENST00000580074 LARGE1O95461 756 aa13.13□□□□□ -0.31
ERBB2-210ENST00000580074 PSMC5P62195 406 aa13.13□□□□□ -0.31
ERBB2-210ENST00000580074 RABEP1Q15276 862 aa13.13□□□□□ -0.31
ERBB2-210ENST00000580074 SAFBQ15424 915 aaKnown RBP eCLIP13.13□□□□□ -0.31
ERBB2-210ENST00000580074 CSPP1Q1MSJ5 1256 aa13.13□□□□□ -0.31
ERBB2-210ENST00000580074 PUS10Q3MIT2 529 aaKnown RBP13.13□□□□□ -0.31
ERBB2-210ENST00000580074 EFCAB12Q6NXP0 572 aa13.13□□□□□ -0.31
ERBB2-210ENST00000580074 SLC24A5Q71RS6 500 aa13.13□□□□□ -0.31
ERBB2-210ENST00000580074 ETNPPLQ8TBG4 499 aa13.13□□□□□ -0.31
ERBB2-210ENST00000580074 TNFRSF25Q93038 417 aa13.13□□□□□ -0.31
ERBB2-210ENST00000580074 P2RX5Q93086 422 aa13.13□□□□□ -0.31
ERBB2-210ENST00000580074 UIMC1Q96RL1 719 aa13.13□□□□□ -0.31
ERBB2-210ENST00000580074 INO80BQ9C086 356 aaPredicted RBP13.13□□□□□ -0.31
ERBB2-210ENST00000580074 NSUN3Q9H649 340 aaKnown RBP13.13□□□□□ -0.31
ERBB2-210ENST00000580074 ERVK-5Q9HDB9 667 aa13.13□□□□□ -0.31
ERBB2-210ENST00000580074 KCNMB3Q9NPA1 279 aa13.13□□□□□ -0.31
ERBB2-210ENST00000580074 KCNJ14Q9UNX9 436 aa13.13□□□□□ -0.31
ERBB2-210ENST00000580074 CARNS1A5YM72 827 aa13.12□□□□□ -0.31
ERBB2-210ENST00000580074 CCNT1O60563 726 aaKnown RBP13.12□□□□□ -0.31
ERBB2-210ENST00000580074 ATP4AP20648 1035 aa13.12□□□□□ -0.31
ERBB2-210ENST00000580074 BMPR1AP36894 532 aa13.12□□□□□ -0.31
ERBB2-210ENST00000580074 CLCN3P51790 818 aa13.12□□□□□ -0.31
ERBB2-210ENST00000580074 HMGN5P82970 282 aaKnown RBP13.12□□□□□ -0.31
ERBB2-210ENST00000580074 PPP2R5CQ13362 524 aa13.12□□□□□ -0.31
ERBB2-210ENST00000580074 KIZQ2M2Z5 673 aa13.12□□□□□ -0.31
ERBB2-210ENST00000580074 SPOUT1Q5T280 376 aaKnown RBP13.12□□□□□ -0.31
ERBB2-210ENST00000580074 PIK3AP1Q6ZUJ8 805 aa13.12□□□□□ -0.31
ERBB2-210ENST00000580074 ABI1Q8IZP0 508 aa13.12□□□□□ -0.31
ERBB2-210ENST00000580074 NECAB1Q8N987 351 aa13.12□□□□□ -0.31
ERBB2-210ENST00000580074 BANK1Q8NDB2 785 aa13.12□□□□□ -0.31
ERBB2-210ENST00000580074 NLRP7Q8WX94 980 aa13.12□□□□□ -0.31
ERBB2-210ENST00000580074 CLP1Q92989 425 aaKnown RBP13.12□□□□□ -0.31
ERBB2-210ENST00000580074 ZNF689Q96CS4 500 aaPredicted RBP13.12□□□□□ -0.31
ERBB2-210ENST00000580074 ZBTB10Q96DT7 871 aa13.12□□□□□ -0.31
ERBB2-210ENST00000580074 OSMRQ99650 979 aa13.12□□□□□ -0.31
ERBB2-210ENST00000580074 ELAC1Q9H777 363 aaKnown RBP13.12□□□□□ -0.31
ERBB2-210ENST00000580074 UBE2ZQ9H832 354 aaPredicted RBP13.12□□□□□ -0.31
ERBB2-210ENST00000580074 ATP6V0A4Q9HBG4 840 aa13.12□□□□□ -0.31
ERBB2-210ENST00000580074 RGS18Q9NS28 235 aa13.12□□□□□ -0.31
ERBB2-210ENST00000580074 DACT1Q9NYF0 836 aa13.12□□□□□ -0.31
ERBB2-210ENST00000580074 ST3GAL5Q9UNP4 418 aa13.12□□□□□ -0.31
ERBB2-210ENST00000580074 LAMA2P24043 3122 aaKnown RBP13.12□□□□□ -0.31
ERBB2-210ENST00000580074 ZBTB42B2RXF5 422 aa13.11□□□□□ -0.31
ERBB2-210ENST00000580074 GAS2O43903 313 aaKnown RBP13.11□□□□□ -0.31
ERBB2-210ENST00000580074 MMP1P03956 469 aa13.11□□□□□ -0.31
ERBB2-210ENST00000580074 VTNP04004 478 aa13.11□□□□□ -0.31
ERBB2-210ENST00000580074 SFPQP23246 707 aaKnown RBP eCLIP13.11□□□□□ -0.31
ERBB2-210ENST00000580074 QARSP47897 775 aaKnown RBP13.11□□□□□ -0.31
ERBB2-210ENST00000580074 NLRP11P59045 1033 aaKnown RBP13.11□□□□□ -0.31
ERBB2-210ENST00000580074 ST3GAL1Q11201 340 aa13.11□□□□□ -0.31
ERBB2-210ENST00000580074 TMEM266Q2M3C6 531 aa13.11□□□□□ -0.31
ERBB2-210ENST00000580074 MTERF2Q49AM1 385 aa13.11□□□□□ -0.31
ERBB2-210ENST00000580074 KRT40Q6A162 431 aa13.11□□□□□ -0.31
ERBB2-210ENST00000580074 OTUD6AQ7L8S5 288 aa13.11□□□□□ -0.31
ERBB2-210ENST00000580074 SPRED2Q7Z698 418 aa13.11□□□□□ -0.31
ERBB2-210ENST00000580074 ZNF410Q86VK4 478 aa13.11□□□□□ -0.31
ERBB2-210ENST00000580074 SLC7A3Q8WY07 619 aa13.11□□□□□ -0.31
ERBB2-210ENST00000580074 CCDC43Q96MW1 224 aaKnown RBP13.11□□□□□ -0.31
ERBB2-210ENST00000580074 ADAM2Q99965 735 aa13.11□□□□□ -0.31
ERBB2-210ENST00000580074 GCOM2Q9BZD3 368 aaPredicted RBP13.11□□□□□ -0.31
ERBB2-210ENST00000580074 OSBPL7Q9BZF2 842 aa13.11□□□□□ -0.31
ERBB2-210ENST00000580074 UPF2Q9HAU5 1272 aaKnown RBP13.11□□□□□ -0.31
ERBB2-210ENST00000580074 RC3H2Q9HBD1 1191 aaKnown RBP13.11□□□□□ -0.31
ERBB2-210ENST00000580074 TMEM161AQ9NX61 479 aa13.11□□□□□ -0.31
ERBB2-210ENST00000580074 NOC2LQ9Y3T9 749 aaKnown RBP13.11□□□□□ -0.31
ERBB2-210ENST00000580074 PCDHB12Q9Y5F1 795 aa13.11□□□□□ -0.31
ERBB2-210ENST00000580074 ZNF862O60290 1169 aa13.1□□□□□ -0.31
ERBB2-210ENST00000580074 P4HBP07237 508 aaKnown RBP13.1□□□□□ -0.31
ERBB2-210ENST00000580074 SKIP12755 728 aa13.1□□□□□ -0.31
ERBB2-210ENST00000580074 EIF4BP23588 611 aaKnown RBP13.1□□□□□ -0.31
ERBB2-210ENST00000580074 UBE3AQ05086 875 aa13.1□□□□□ -0.31
ERBB2-210ENST00000580074 ORC2Q13416 577 aaPredicted RBP13.1□□□□□ -0.31
ERBB2-210ENST00000580074 FAM228AQ86W67 206 aa13.1□□□□□ -0.31
ERBB2-210ENST00000580074 LRRC71Q8N4P6 559 aa13.1□□□□□ -0.31
ERBB2-210ENST00000580074 NEK9Q8TD19 979 aa13.1□□□□□ -0.31
ERBB2-210ENST00000580074 LINC01599Q8WXQ3 324 aa13.1□□□□□ -0.31
ERBB2-210ENST00000580074 NIFKQ9BYG3 293 aaKnown RBP13.1□□□□□ -0.31
ERBB2-210ENST00000580074 KIF3AQ9Y496 699 aa13.1□□□□□ -0.31
ERBB2-210ENST00000580074 DDX11L8A8MPP1 907 aa13.09□□□□□ -0.31
ERBB2-210ENST00000580074 SLC37A4O43826 429 aa13.09□□□□□ -0.31
ERBB2-210ENST00000580074 GPR32O75388 356 aa13.09□□□□□ -0.31
ERBB2-210ENST00000580074 LAG3P18627 525 aa13.09□□□□□ -0.31
ERBB2-210ENST00000580074 IBSPP21815 317 aaPredicted RBP13.09□□□□□ -0.31
ERBB2-210ENST00000580074 RFC5P40937 340 aa13.09□□□□□ -0.31
ERBB2-210ENST00000580074 GPC3P51654 580 aa13.09□□□□□ -0.31
ERBB2-210ENST00000580074 POLGP54098 1239 aaPredicted RBP13.09□□□□□ -0.31
ERBB2-210ENST00000580074 TFF2Q03403 129 aa13.09□□□□□ -0.31
ERBB2-210ENST00000580074 GNL2Q13823 731 aaKnown RBP13.09□□□□□ -0.31
ERBB2-210ENST00000580074 UGCGQ16739 394 aa13.09□□□□□ -0.31
ERBB2-210ENST00000580074 PAN2Q504Q3 1202 aaKnown RBP13.09□□□□□ -0.31
ERBB2-210ENST00000580074 LRRC43Q8N309 656 aa13.09□□□□□ -0.31
ERBB2-210ENST00000580074 LINC01465Q8N7H1 131 aa13.09□□□□□ -0.31
ERBB2-210ENST00000580074 OXER1Q8TDS5 423 aa13.09□□□□□ -0.31
ERBB2-210ENST00000580074 TMEM40Q8WWA1 233 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms