RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 MYBPC3Q14896 1274 aa6.23□□□□□ -1.41
LINC00560-201ENST00000564593 LRRC41Q15345 812 aa6.23□□□□□ -1.41
LINC00560-201ENST00000564593 UGT8Q16880 541 aa6.23□□□□□ -1.41
LINC00560-201ENST00000564593 SKIDA1Q1XH10 827 aa6.23□□□□□ -1.41
LINC00560-201ENST00000564593 CCDC62Q6P9F0 684 aa6.23□□□□□ -1.41
LINC00560-201ENST00000564593 STK32CQ86UX6 486 aa6.23□□□□□ -1.41
LINC00560-201ENST00000564593 WDR48Q8TAF3 677 aa6.23□□□□□ -1.41
LINC00560-201ENST00000564593 MZB1Q8WU39 189 aa6.23□□□□□ -1.41
LINC00560-201ENST00000564593 TSR2Q969E8 191 aaKnown RBP6.23□□□□□ -1.41
LINC00560-201ENST00000564593 TMEM209Q96SK2 561 aa6.23□□□□□ -1.41
LINC00560-201ENST00000564593 ORAI2Q96SN7 254 aa6.23□□□□□ -1.41
LINC00560-201ENST00000564593 SYT3Q9BQG1 590 aa6.23□□□□□ -1.41
LINC00560-201ENST00000564593 SGPP1Q9BX95 441 aa6.23□□□□□ -1.41
LINC00560-201ENST00000564593 DLL4Q9NR61 685 aa6.23□□□□□ -1.41
LINC00560-201ENST00000564593 CCM2LQ9NUG4 571 aaPredicted RBP6.23□□□□□ -1.41
LINC00560-201ENST00000564593 PPP2R3BQ9Y5P8 575 aa6.23□□□□□ -1.41
LINC00560-201ENST00000564593 TEX51A0A1B0GUA7 166 aa6.23□□□□□ -1.41
LINC00560-201ENST00000564593 XPOTO43592 962 aaKnown RBP6.23□□□□□ -1.41
LINC00560-201ENST00000564593 TSPAN6O43657 245 aa6.23□□□□□ -1.41
LINC00560-201ENST00000564593 ECE1P42892 770 aa6.23□□□□□ -1.41
LINC00560-201ENST00000564593 GLRBP48167 497 aa6.23□□□□□ -1.41
LINC00560-201ENST00000564593 HSP90AB2PQ58FF8 381 aa6.23□□□□□ -1.41
LINC00560-201ENST00000564593 KIAA1841Q6NSI8 718 aa6.23□□□□□ -1.41
LINC00560-201ENST00000564593 LRSAM1Q6UWE0 723 aa6.23□□□□□ -1.41
LINC00560-201ENST00000564593 UNQ6494/PRO21346Q6UXR6 183 aa6.23□□□□□ -1.41
LINC00560-201ENST00000564593 B3GNT8Q7Z7M8 397 aa6.23□□□□□ -1.41
LINC00560-201ENST00000564593 CHPFQ8IZ52 775 aa6.23□□□□□ -1.41
LINC00560-201ENST00000564593 DTX3Q8N9I9 347 aa6.23□□□□□ -1.41
LINC00560-201ENST00000564593 BHLHE22Q8NFJ8 381 aaPredicted RBP6.23□□□□□ -1.41
LINC00560-201ENST00000564593 EAF2Q96CJ1 260 aaPredicted RBP6.23□□□□□ -1.41
LINC00560-201ENST00000564593 CDH19Q9H159 772 aa6.23□□□□□ -1.41
LINC00560-201ENST00000564593 PCDH18Q9HCL0 1135 aa6.23□□□□□ -1.41
LINC00560-201ENST00000564593 LUC7LQ9NQ29 371 aaKnown RBP6.23□□□□□ -1.41
LINC00560-201ENST00000564593 DNAJC28Q9NX36 388 aa6.23□□□□□ -1.41
LINC00560-201ENST00000564593 ARHGAP20Q9P2F6 1191 aa6.23□□□□□ -1.41
LINC00560-201ENST00000564593 IP6K2Q9UHH9 426 aa6.23□□□□□ -1.41
LINC00560-201ENST00000564593 ZNF180Q9UJW8 692 aa6.23□□□□□ -1.41
LINC00560-201ENST00000564593 EDARQ9UNE0 448 aa6.23□□□□□ -1.41
LINC00560-201ENST00000564593 ST20-MTHFSA0A0A6YYL1 179 aa6.22□□□□□ -1.41
LINC00560-201ENST00000564593 KLHL33A6NCF5 533 aa6.22□□□□□ -1.41
LINC00560-201ENST00000564593 SCGB1D2O95969 90 aa6.22□□□□□ -1.41
LINC00560-201ENST00000564593 ZSCAN20P17040 1043 aaPredicted RBP6.22□□□□□ -1.41
LINC00560-201ENST00000564593 RECQLP46063 649 aaPredicted RBP6.22□□□□□ -1.41
LINC00560-201ENST00000564593 KRT85P78386 507 aa6.22□□□□□ -1.41
LINC00560-201ENST00000564593 NOLC1Q14978 699 aaKnown RBP eCLIP6.22□□□□□ -1.41
LINC00560-201ENST00000564593 ACAP2Q15057 778 aa6.22□□□□□ -1.41
LINC00560-201ENST00000564593 ZBTB41Q5SVQ8 909 aa6.22□□□□□ -1.41
LINC00560-201ENST00000564593 PHF19Q5T6S3 580 aa6.22□□□□□ -1.41
LINC00560-201ENST00000564593 NOL8Q76FK4 1167 aaKnown RBP6.22□□□□□ -1.41
LINC00560-201ENST00000564593 BTBD2Q9BX70 525 aa6.22□□□□□ -1.41
LINC00560-201ENST00000564593 RTFDC1Q9BY42 306 aaPredicted RBP6.22□□□□□ -1.41
LINC00560-201ENST00000564593 QRSL1Q9H0R6 528 aaKnown RBP6.22□□□□□ -1.41
LINC00560-201ENST00000564593 WNT8AQ9H1J5 351 aa6.22□□□□□ -1.41
LINC00560-201ENST00000564593 N4BP3O15049 544 aa6.21□□□□□ -1.42
LINC00560-201ENST00000564593 PCDHGA12O60330 932 aa6.21□□□□□ -1.42
LINC00560-201ENST00000564593 SEMA7AO75326 666 aa6.21□□□□□ -1.42
LINC00560-201ENST00000564593 ABLIM3O94929 683 aa6.21□□□□□ -1.42
LINC00560-201ENST00000564593 LPLP06858 475 aa6.21□□□□□ -1.42
LINC00560-201ENST00000564593 CT47B1P0C2W7 299 aaPredicted RBP6.21□□□□□ -1.42
LINC00560-201ENST00000564593 EPHB3P54753 998 aa6.21□□□□□ -1.42
LINC00560-201ENST00000564593 ITGA1P56199 1179 aa6.21□□□□□ -1.42
LINC00560-201ENST00000564593 SRSF2Q01130 221 aaKnown RBP6.21□□□□□ -1.42
LINC00560-201ENST00000564593 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.21□□□□□ -1.42
LINC00560-201ENST00000564593 PITRM1Q5JRX3 1037 aa6.21□□□□□ -1.42
LINC00560-201ENST00000564593 TOR2AQ5JU69 321 aa6.21□□□□□ -1.42
LINC00560-201ENST00000564593 KANSL1Q7Z3B3 1105 aa6.21□□□□□ -1.42
LINC00560-201ENST00000564593 IGDCC3Q8IVU1 814 aa6.21□□□□□ -1.42
LINC00560-201ENST00000564593 WDR75Q8IWA0 830 aaKnown RBP6.21□□□□□ -1.42
LINC00560-201ENST00000564593 RPGRQ92834 1020 aaKnown RBP6.21□□□□□ -1.42
LINC00560-201ENST00000564593 CLIC6Q96NY7 704 aa6.21□□□□□ -1.42
LINC00560-201ENST00000564593 GORASP1Q9BQQ3 440 aa6.21□□□□□ -1.42
LINC00560-201ENST00000564593 PCDHGA9Q9Y5G4 932 aaKnown RBP6.21□□□□□ -1.42
LINC00560-201ENST00000564593 PCDHGA8Q9Y5G5 932 aa6.21□□□□□ -1.42
LINC00560-201ENST00000564593 PCDHGA7Q9Y5G6 932 aa6.21□□□□□ -1.42
LINC00560-201ENST00000564593 PCDHGA6Q9Y5G7 932 aa6.21□□□□□ -1.42
LINC00560-201ENST00000564593 PCDHGA3Q9Y5H0 932 aa6.21□□□□□ -1.42
LINC00560-201ENST00000564593 PCDHGA2Q9Y5H1 932 aa6.21□□□□□ -1.42
LINC00560-201ENST00000564593 IGFBP6P24592 240 aaPredicted RBP6.2□□□□□ -1.42
LINC00560-201ENST00000564593 APEX1P27695 318 aaKnown RBP6.2□□□□□ -1.42
LINC00560-201ENST00000564593 BCAR1P56945 870 aa6.2□□□□□ -1.42
LINC00560-201ENST00000564593 FOXO4P98177 505 aa6.2□□□□□ -1.42
LINC00560-201ENST00000564593 MESP2Q0VG99 397 aa6.2□□□□□ -1.42
LINC00560-201ENST00000564593 ODF1Q14990 250 aa6.2□□□□□ -1.42
LINC00560-201ENST00000564593 CCDC181Q5TID7 509 aa6.2□□□□□ -1.42
LINC00560-201ENST00000564593 CPA6Q8N4T0 437 aa6.2□□□□□ -1.42
LINC00560-201ENST00000564593 FBXO15Q8NCQ5 510 aaPredicted RBP6.2□□□□□ -1.42
LINC00560-201ENST00000564593 JPH3Q8WXH2 748 aaPredicted RBP6.2□□□□□ -1.42
LINC00560-201ENST00000564593 FAM84AQ96KN4 292 aa6.2□□□□□ -1.42
LINC00560-201ENST00000564593 ZSWIM3Q96MP5 696 aa6.2□□□□□ -1.42
LINC00560-201ENST00000564593 CAMKK2Q96RR4 588 aa6.2□□□□□ -1.42
LINC00560-201ENST00000564593 TACO1Q9BSH4 297 aaKnown RBP6.2□□□□□ -1.42
LINC00560-201ENST00000564593 OR10A5Q9H207 317 aa6.2□□□□□ -1.42
LINC00560-201ENST00000564593 ZFP69BQ9UJL9 534 aa6.2□□□□□ -1.42
LINC00560-201ENST00000564593 INVSQ9Y283 1065 aa6.2□□□□□ -1.42
LINC00560-201ENST00000564593 NUMBLQ9Y6R0 609 aa6.2□□□□□ -1.42
LINC00560-201ENST00000564593 NCANO14594 1321 aa6.19□□□□□ -1.42
LINC00560-201ENST00000564593 MAFGO15525 162 aa6.19□□□□□ -1.42
LINC00560-201ENST00000564593 PCDH8O95206 1070 aa6.19□□□□□ -1.42
LINC00560-201ENST00000564593 IL18BPO95998 194 aa6.19□□□□□ -1.42
LINC00560-201ENST00000564593 LGALS4P56470 323 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms