RNA–Protein interactions for RNA: ENST00000563218.5

SPG7-207, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-207ENST00000563218 SMC3Q9UQE7 1217 aa15.14■□□□□ 0.01
SPG7-207ENST00000563218 DENND4AQ7Z401 1863 aa15.14■□□□□ 0.01
SPG7-207ENST00000563218 MYO15AQ9UKN7 3530 aa15.13■□□□□ 0.01
SPG7-207ENST00000563218 C2orf16Q68DN1 1984 aa15.13■□□□□ 0.01
SPG7-207ENST00000563218 MEIS1O00470 390 aa15.13■□□□□ 0.01
SPG7-207ENST00000563218 PER2O15055 1255 aa15.13■□□□□ 0.01
SPG7-207ENST00000563218 EYA4O95677 639 aa15.13■□□□□ 0.01
SPG7-207ENST00000563218 STAG3L1P0CL83 205 aa15.13■□□□□ 0.01
SPG7-207ENST00000563218 PDIA3P30101 505 aaKnown RBP15.13■□□□□ 0.01
SPG7-207ENST00000563218 CDC27P30260 824 aa15.13■□□□□ 0.01
SPG7-207ENST00000563218 DDIT3P35638 169 aa15.13■□□□□ 0.01
SPG7-207ENST00000563218 SREBF1P36956 1147 aa15.13■□□□□ 0.01
SPG7-207ENST00000563218 SARSP49591 514 aaKnown RBP15.13■□□□□ 0.01
SPG7-207ENST00000563218 PLXNA3P51805 1871 aa15.13■□□□□ 0.01
SPG7-207ENST00000563218 RTN1Q16799 776 aa15.13■□□□□ 0.01
SPG7-207ENST00000563218 JAKMIP3Q5VZ66 844 aa15.13■□□□□ 0.01
SPG7-207ENST00000563218 PPP1R18Q6NYC8 613 aa15.13■□□□□ 0.01
SPG7-207ENST00000563218 SYNE3Q6ZMZ3 975 aa15.13■□□□□ 0.01
SPG7-207ENST00000563218 FAM228AQ86W67 206 aa15.13■□□□□ 0.01
SPG7-207ENST00000563218 KIAA0319LQ8IZA0 1049 aa15.13■□□□□ 0.01
SPG7-207ENST00000563218 EFHBQ8N7U6 833 aa15.13■□□□□ 0.01
SPG7-207ENST00000563218 GTF3C6Q969F1 213 aa15.13■□□□□ 0.01
SPG7-207ENST00000563218 PHOX2BQ99453 314 aa15.13■□□□□ 0.01
SPG7-207ENST00000563218 V9GY48 417 aaPredicted RBP15.13■□□□□ 0.01
SPG7-207ENST00000563218 IGLV3-22A0A075B6J6 115 aa15.12■□□□□ 0.01
SPG7-207ENST00000563218 SMCO2A6NFE2 343 aa15.12■□□□□ 0.01
SPG7-207ENST00000563218 TBKBP1A7MCY6 615 aa15.12■□□□□ 0.01
SPG7-207ENST00000563218 GOLGA8BA8MQT2 603 aa15.12■□□□□ 0.01
SPG7-207ENST00000563218 DHX15O43143 795 aaKnown RBP15.12■□□□□ 0.01
SPG7-207ENST00000563218 RPS6KA5O75582 802 aa15.12■□□□□ 0.01
SPG7-207ENST00000563218 FGFR1P11362 822 aa15.12■□□□□ 0.01
SPG7-207ENST00000563218 ERVFC1P60507 584 aa15.12■□□□□ 0.01
SPG7-207ENST00000563218 NAALADL2Q58DX5 795 aa15.12■□□□□ 0.01
SPG7-207ENST00000563218 SPOUT1Q5T280 376 aaKnown RBP15.12■□□□□ 0.01
SPG7-207ENST00000563218 TRMT1LQ7Z2T5 733 aaKnown RBP15.12■□□□□ 0.01
SPG7-207ENST00000563218 ATP8B4Q8TF62 1192 aa15.12■□□□□ 0.01
SPG7-207ENST00000563218 POP1Q99575 1024 aaKnown RBP15.12■□□□□ 0.01
SPG7-207ENST00000563218 OSMRQ99650 979 aa15.12■□□□□ 0.01
SPG7-207ENST00000563218 ADAM2Q99965 735 aa15.12■□□□□ 0.01
SPG7-207ENST00000563218 RBM28Q9NW13 759 aaKnown RBP15.12■□□□□ 0.01
SPG7-207ENST00000563218 BARHL2Q9NY43 387 aa15.12■□□□□ 0.01
SPG7-207ENST00000563218 USP15Q9Y4E8 981 aaPredicted RBP15.12■□□□□ 0.01
SPG7-207ENST00000563218 ARID2Q68CP9 1835 aa15.11■□□□□ 0.01
SPG7-207ENST00000563218 GOLGA8AA7E2F4 631 aa15.11■□□□□ 0.01
SPG7-207ENST00000563218 LOC730098B7Z3J9 87 aa15.11■□□□□ 0.01
SPG7-207ENST00000563218 C9IYK1 514 aa15.11■□□□□ 0.01
SPG7-207ENST00000563218 BACH1O14867 736 aa15.11■□□□□ 0.01
SPG7-207ENST00000563218 ZBTB43O43298 467 aa15.11■□□□□ 0.01
SPG7-207ENST00000563218 C22orf31O95567 290 aa15.11■□□□□ 0.01
SPG7-207ENST00000563218 VTNP04004 478 aa15.11■□□□□ 0.01
SPG7-207ENST00000563218 ST3GAL1Q11201 340 aa15.11■□□□□ 0.01
SPG7-207ENST00000563218 SCRN1Q12765 414 aa15.11■□□□□ 0.01
SPG7-207ENST00000563218 COASYQ13057 564 aa15.11■□□□□ 0.01
SPG7-207ENST00000563218 KIZQ2M2Z5 673 aa15.11■□□□□ 0.01
SPG7-207ENST00000563218 PLA2G4DQ86XP0 818 aa15.11■□□□□ 0.01
SPG7-207ENST00000563218 COLGALT1Q8NBJ5 622 aa15.11■□□□□ 0.01
SPG7-207ENST00000563218 PRSS33Q8NF86 280 aa15.11■□□□□ 0.01
SPG7-207ENST00000563218 CWH43Q9H720 699 aa15.11■□□□□ 0.01
SPG7-207ENST00000563218 ZNF302Q9NR11 478 aa15.11■□□□□ 0.01
SPG7-207ENST00000563218 RGS18Q9NS28 235 aa15.11■□□□□ 0.01
SPG7-207ENST00000563218 RNF19AQ9NV58 838 aa15.11■□□□□ 0.01
SPG7-207ENST00000563218 ST3GAL5Q9UNP4 418 aa15.11■□□□□ 0.01
SPG7-207ENST00000563218 DMDP11532 3685 aa15.11■□□□□ 0.01
SPG7-207ENST00000563218 COL1A2P08123 1366 aa15.11■□□□□ 0.01
SPG7-207ENST00000563218 DENND3A2RUS2 1198 aa15.1■□□□□ 0.01
SPG7-207ENST00000563218 HBP1O60381 514 aa15.1■□□□□ 0.01
SPG7-207ENST00000563218 FGF18O76093 207 aa15.1■□□□□ 0.01
SPG7-207ENST00000563218 FOSP01100 380 aaPredicted RBP15.1■□□□□ 0.01
SPG7-207ENST00000563218 RPLP2P05387 115 aaKnown RBP15.1■□□□□ 0.01
SPG7-207ENST00000563218 ZNF76P36508 570 aa15.1■□□□□ 0.01
SPG7-207ENST00000563218 PBX3P40426 434 aa15.1■□□□□ 0.01
SPG7-207ENST00000563218 CCT2P78371 535 aaKnown RBP15.1■□□□□ 0.01
SPG7-207ENST00000563218 NUCB2P80303 420 aa15.1■□□□□ 0.01
SPG7-207ENST00000563218 AP3B2Q13367 1082 aa15.1■□□□□ 0.01
SPG7-207ENST00000563218 IER5LQ5T953 404 aa15.1■□□□□ 0.01
SPG7-207ENST00000563218 FAM160B1Q5W0V3 765 aa15.1■□□□□ 0.01
SPG7-207ENST00000563218 SWSAP1Q6NVH7 229 aa15.1■□□□□ 0.01
SPG7-207ENST00000563218 PDXDC2PQ6P474 469 aa15.1■□□□□ 0.01
SPG7-207ENST00000563218 NME8Q8N427 588 aa15.1■□□□□ 0.01
SPG7-207ENST00000563218 CRYGNQ8WXF5 182 aa15.1■□□□□ 0.01
SPG7-207ENST00000563218 EDAQ92838 391 aa15.1■□□□□ 0.01
SPG7-207ENST00000563218 ZNF668Q96K58 619 aaPredicted RBP15.1■□□□□ 0.01
SPG7-207ENST00000563218 LLPHQ9BRT6 129 aaKnown RBP15.1■□□□□ 0.01
SPG7-207ENST00000563218 TLR9Q9NR96 1032 aa15.1■□□□□ 0.01
SPG7-207ENST00000563218 TYW1Q9NV66 732 aaKnown RBP15.1■□□□□ 0.01
SPG7-207ENST00000563218 CDH22Q9UJ99 828 aa15.1■□□□□ 0.01
SPG7-207ENST00000563218 PCDHB7Q9Y5E2 793 aa15.1■□□□□ 0.01
SPG7-207ENST00000563218 ZDBF2Q9HCK1 2354 aa15.1■□□□□ 0.01
SPG7-207ENST00000563218 TMEM221A6NGB7 291 aa15.09■□□□□ 0.01
SPG7-207ENST00000563218 M0R296 226 aa15.09■□□□□ 0.01
SPG7-207ENST00000563218 FSCN2O14926 492 aa15.09■□□□□ 0.01
SPG7-207ENST00000563218 GPR32O75388 356 aa15.09■□□□□ 0.01
SPG7-207ENST00000563218 GJB2P29033 226 aa15.09■□□□□ 0.01
SPG7-207ENST00000563218 METAP2P50579 478 aaKnown RBP eCLIP15.09■□□□□ 0.01
SPG7-207ENST00000563218 CLCN3P51790 818 aa15.09■□□□□ 0.01
SPG7-207ENST00000563218 DSC3Q14574 896 aa15.09■□□□□ 0.01
SPG7-207ENST00000563218 PLPP4Q5VZY2 271 aa15.09■□□□□ 0.01
SPG7-207ENST00000563218 RASGRP4Q8TDF6 673 aa15.09■□□□□ 0.01
SPG7-207ENST00000563218 PPP2R3CQ969Q6 453 aa15.09■□□□□ 0.01
SPG7-207ENST00000563218 APOL5Q9BWW9 433 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms