RNA–Protein interactions for RNA: ENST00000560777.5

RABGGTA-218, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5 BASIC

Gene RABGGTA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-218ENST00000560777 DHX33Q9H6R0 707 aaKnown RBP13.34□□□□□ -0.27
RABGGTA-218ENST00000560777 CDHR5Q9HBB8 845 aa13.34□□□□□ -0.27
RABGGTA-218ENST00000560777 DDX19AQ9NUU7 478 aaKnown RBP13.34□□□□□ -0.27
RABGGTA-218ENST00000560777 DBR1Q9UK59 544 aaKnown RBP13.34□□□□□ -0.27
RABGGTA-218ENST00000560777 PPME1Q9Y570 386 aa13.34□□□□□ -0.27
RABGGTA-218ENST00000560777 CDY2AQ9Y6F7 541 aa13.34□□□□□ -0.27
RABGGTA-218ENST00000560777 RANBP2P49792 3224 aaKnown RBP13.34□□□□□ -0.27
RABGGTA-218ENST00000560777 SPTLC2O15270 562 aa13.33□□□□□ -0.28
RABGGTA-218ENST00000560777 YEATS4O95619 227 aa13.33□□□□□ -0.28
RABGGTA-218ENST00000560777 CXCL10P02778 98 aa13.33□□□□□ -0.28
RABGGTA-218ENST00000560777 VTNP04004 478 aa13.33□□□□□ -0.28
RABGGTA-218ENST00000560777 TMOD1P28289 359 aa13.33□□□□□ -0.28
RABGGTA-218ENST00000560777 RFC5P40937 340 aa13.33□□□□□ -0.28
RABGGTA-218ENST00000560777 MRPS6P82932 125 aaKnown RBP13.33□□□□□ -0.28
RABGGTA-218ENST00000560777 STK38Q15208 465 aa13.33□□□□□ -0.28
RABGGTA-218ENST00000560777 SHHQ15465 462 aa13.33□□□□□ -0.28
RABGGTA-218ENST00000560777 SPECC1Q5M775 1068 aa13.33□□□□□ -0.28
RABGGTA-218ENST00000560777 C9orf50Q5SZB4 431 aa13.33□□□□□ -0.28
RABGGTA-218ENST00000560777 HYIQ5T013 277 aa13.33□□□□□ -0.28
RABGGTA-218ENST00000560777 USP49Q70CQ1 688 aa13.33□□□□□ -0.28
RABGGTA-218ENST00000560777 EXOC8Q8IYI6 725 aa13.33□□□□□ -0.28
RABGGTA-218ENST00000560777 CHAMP1Q96JM3 812 aa13.33□□□□□ -0.28
RABGGTA-218ENST00000560777 PNMA5Q96PV4 448 aa13.33□□□□□ -0.28
RABGGTA-218ENST00000560777 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.33□□□□□ -0.282e-7■■□□□ 12.6
RABGGTA-218ENST00000560777 CELF4Q9BZC1 486 aaKnown RBP13.33□□□□□ -0.28
RABGGTA-218ENST00000560777 TSHZ2Q9NRE2 1034 aa13.33□□□□□ -0.28
RABGGTA-218ENST00000560777 CFAP45Q9UL16 551 aa13.33□□□□□ -0.28
RABGGTA-218ENST00000560777 SCN5AQ14524 2016 aa13.33□□□□□ -0.28
RABGGTA-218ENST00000560777 E9PMD0 336 aa13.32□□□□□ -0.28
RABGGTA-218ENST00000560777 PPP6R2O75170 966 aa13.32□□□□□ -0.28
RABGGTA-218ENST00000560777 GPR32O75388 356 aa13.32□□□□□ -0.28
RABGGTA-218ENST00000560777 FGBP02675 491 aa13.32□□□□□ -0.28
RABGGTA-218ENST00000560777 PFKMP08237 780 aa13.32□□□□□ -0.28
RABGGTA-218ENST00000560777 UBA7P41226 1012 aa13.32□□□□□ -0.28
RABGGTA-218ENST00000560777 POLGP54098 1239 aaPredicted RBP13.32□□□□□ -0.28
RABGGTA-218ENST00000560777 NUCB2P80303 420 aa13.32□□□□□ -0.28
RABGGTA-218ENST00000560777 GRB10Q13322 594 aa13.32□□□□□ -0.28
RABGGTA-218ENST00000560777 ZRSR1Q15695 479 aaKnown RBP13.32□□□□□ -0.28
RABGGTA-218ENST00000560777 TCTN1Q2MV58 587 aa13.32□□□□□ -0.28
RABGGTA-218ENST00000560777 KCNK18Q7Z418 384 aa13.32□□□□□ -0.28
RABGGTA-218ENST00000560777 CABP7Q86V35 215 aa13.32□□□□□ -0.28
RABGGTA-218ENST00000560777 KRI1Q8N9T8 703 aaKnown RBP13.32□□□□□ -0.28
RABGGTA-218ENST00000560777 TET1Q8NFU7 2136 aa13.32□□□□□ -0.28
RABGGTA-218ENST00000560777 SLC7A3Q8WY07 619 aa13.32□□□□□ -0.28
RABGGTA-218ENST00000560777 EPSTI1Q96J88 318 aa13.32□□□□□ -0.28
RABGGTA-218ENST00000560777 PLIN2Q99541 437 aa13.32□□□□□ -0.28
RABGGTA-218ENST00000560777 JPH2Q9BR39 696 aaPredicted RBP13.32□□□□□ -0.28
RABGGTA-218ENST00000560777 ADAMTS10Q9H324 1103 aa13.32□□□□□ -0.28
RABGGTA-218ENST00000560777 XPNPEP1Q9NQW7 623 aa13.32□□□□□ -0.28
RABGGTA-218ENST00000560777 BMP2KQ9NSY1 1161 aaPredicted RBP13.32□□□□□ -0.28
RABGGTA-218ENST00000560777 SUCLA2Q9P2R7 463 aaPredicted RBP13.32□□□□□ -0.28
RABGGTA-218ENST00000560777 RCOR1Q9UKL0 485 aa13.32□□□□□ -0.28
RABGGTA-218ENST00000560777 DNM3Q9UQ16 869 aa13.32□□□□□ -0.28
RABGGTA-218ENST00000560777 AKT3Q9Y243 479 aa13.32□□□□□ -0.28
RABGGTA-218ENST00000560777 RBM19Q9Y4C8 960 aaKnown RBP13.32□□□□□ -0.28
RABGGTA-218ENST00000560777 TRPV2Q9Y5S1 764 aa13.32□□□□□ -0.28
RABGGTA-218ENST00000560777 KDM3AQ9Y4C1 1321 aa13.32□□□□□ -0.28
RABGGTA-218ENST00000560777 MYH15Q9Y2K3 1946 aa13.31□□□□□ -0.28
RABGGTA-218ENST00000560777 M0QZ92 97 aa13.31□□□□□ -0.28
RABGGTA-218ENST00000560777 SLC26A4O43511 780 aa13.31□□□□□ -0.28
RABGGTA-218ENST00000560777 DGAT1O75907 488 aa13.31□□□□□ -0.28
RABGGTA-218ENST00000560777 EYA4O95677 639 aa13.31□□□□□ -0.28
RABGGTA-218ENST00000560777 DNM2P50570 870 aa13.31□□□□□ -0.28
RABGGTA-218ENST00000560777 NLRP11P59045 1033 aaKnown RBP13.31□□□□□ -0.28
RABGGTA-218ENST00000560777 LPIN1Q14693 890 aa13.31□□□□□ -0.28
RABGGTA-218ENST00000560777 EMC2Q15006 297 aa13.31□□□□□ -0.28
RABGGTA-218ENST00000560777 KIZQ2M2Z5 673 aa13.31□□□□□ -0.28
RABGGTA-218ENST00000560777 PLEKHG4Q58EX7 1191 aa13.31□□□□□ -0.28
RABGGTA-218ENST00000560777 FBXO47Q5MNV8 452 aa13.31□□□□□ -0.28
RABGGTA-218ENST00000560777 PSRC1Q6PGN9 363 aaPredicted RBP13.31□□□□□ -0.28
RABGGTA-218ENST00000560777 OTOP2Q7RTS6 562 aa13.31□□□□□ -0.28
RABGGTA-218ENST00000560777 TDHQ8IZJ6 230 aa13.31□□□□□ -0.28
RABGGTA-218ENST00000560777 KCTD17Q8N5Z5 321 aa13.31□□□□□ -0.28
RABGGTA-218ENST00000560777 DBF4BQ8NFT6 615 aa13.31□□□□□ -0.28
RABGGTA-218ENST00000560777 TMEM143Q96AN5 459 aa13.31□□□□□ -0.28
RABGGTA-218ENST00000560777 MAP7D2Q96T17 732 aa13.31□□□□□ -0.28
RABGGTA-218ENST00000560777 PPP1R16BQ96T49 567 aa13.31□□□□□ -0.28
RABGGTA-218ENST00000560777 CCSER1Q9C0I3 900 aa13.31□□□□□ -0.28
RABGGTA-218ENST00000560777 BHMT2Q9H2M3 363 aa13.31□□□□□ -0.28
RABGGTA-218ENST00000560777 TANC1Q9C0D5 1861 aa13.3□□□□□ -0.28
RABGGTA-218ENST00000560777 GHRP10912 638 aa13.3□□□□□ -0.28
RABGGTA-218ENST00000560777 GPC3P51654 580 aa13.3□□□□□ -0.28
RABGGTA-218ENST00000560777 CRYBB1P53674 252 aaPredicted RBP13.3□□□□□ -0.28
RABGGTA-218ENST00000560777 KARSQ15046 597 aaKnown RBP13.3□□□□□ -0.28
RABGGTA-218ENST00000560777 TMEM119Q4V9L6 283 aa13.3□□□□□ -0.28
RABGGTA-218ENST00000560777 AXDND1Q5T1B0 1012 aaPredicted RBP13.3□□□□□ -0.28
RABGGTA-218ENST00000560777 RASIP1Q5U651 963 aa13.3□□□□□ -0.28
RABGGTA-218ENST00000560777 PADI6Q6TGC4 694 aa13.3□□□□□ -0.28
RABGGTA-218ENST00000560777 KSR1Q8IVT5 923 aa13.3□□□□□ -0.28
RABGGTA-218ENST00000560777 ZNF710Q8N1W2 664 aa13.3□□□□□ -0.28
RABGGTA-218ENST00000560777 LRRC15Q8TF66 581 aa13.3□□□□□ -0.28
RABGGTA-218ENST00000560777 TMEM40Q8WWA1 233 aa13.3□□□□□ -0.28
RABGGTA-218ENST00000560777 PRPF31Q8WWY3 499 aaKnown RBP13.3□□□□□ -0.28
RABGGTA-218ENST00000560777 HERVK_113Q902F9 699 aa13.3□□□□□ -0.28
RABGGTA-218ENST00000560777 SYMPKQ92797 1274 aaKnown RBP13.3□□□□□ -0.28
RABGGTA-218ENST00000560777 ZNF668Q96K58 619 aaPredicted RBP13.3□□□□□ -0.28
RABGGTA-218ENST00000560777 CCDC43Q96MW1 224 aaKnown RBP13.3□□□□□ -0.28
RABGGTA-218ENST00000560777 MTRQ99707 1265 aa13.3□□□□□ -0.28
RABGGTA-218ENST00000560777 NT5C3AQ9H0P0 336 aa13.3□□□□□ -0.28
RABGGTA-218ENST00000560777 AGO3Q9H9G7 860 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms