RNA–Protein interactions for RNA: ENST00000559742.5

PDE8A-211, Transcript of phosphodiesterase 8A, humanhuman

TSL 1 (best)

Gene PDE8A, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-211ENST00000559742 CCT8L2Q96SF2 557 aa20.49■□□□□ 0.87
PDE8A-211ENST00000559742 GOPCQ9HD26 462 aa20.49■□□□□ 0.87
PDE8A-211ENST00000559742 SALL4Q9UJQ4 1053 aa20.49■□□□□ 0.87
PDE8A-211ENST00000559742 RABGAP1Q9Y3P9 1069 aa20.49■□□□□ 0.87
PDE8A-211ENST00000559742 ABCB11O95342 1321 aa20.49■□□□□ 0.87
PDE8A-211ENST00000559742 IGLV3-22A0A075B6J6 115 aa20.49■□□□□ 0.87
PDE8A-211ENST00000559742 BUB1O43683 1085 aa20.49■□□□□ 0.87
PDE8A-211ENST00000559742 GCNT3O95395 438 aa20.49■□□□□ 0.87
PDE8A-211ENST00000559742 ACTN1P12814 892 aa20.49■□□□□ 0.87
PDE8A-211ENST00000559742 HNRNPH3P31942 346 aaKnown RBP20.49■□□□□ 0.87
PDE8A-211ENST00000559742 CDK17Q00537 523 aa20.49■□□□□ 0.87
PDE8A-211ENST00000559742 ITIH3Q06033 890 aa20.49■□□□□ 0.87
PDE8A-211ENST00000559742 RAPGEF1Q13905 1077 aa20.49■□□□□ 0.87
PDE8A-211ENST00000559742 DCAF17Q5H9S7 520 aaPredicted RBP20.49■□□□□ 0.87
PDE8A-211ENST00000559742 ZNF572Q7Z3I7 529 aaPredicted RBP20.49■□□□□ 0.87
PDE8A-211ENST00000559742 CEP57Q86XR8 500 aa20.49■□□□□ 0.87
PDE8A-211ENST00000559742 KSR1Q8IVT5 923 aa20.49■□□□□ 0.87
PDE8A-211ENST00000559742 TRIM59Q8IWR1 403 aa20.49■□□□□ 0.87
PDE8A-211ENST00000559742 FAM151AQ8WW52 585 aa20.49■□□□□ 0.87
PDE8A-211ENST00000559742 FAM20AQ96MK3 541 aa20.49■□□□□ 0.87
PDE8A-211ENST00000559742 TNS1Q9HBL0 1735 aaKnown RBP20.49■□□□□ 0.87
PDE8A-211ENST00000559742 FRMD3A2A2Y4 597 aa20.48■□□□□ 0.87
PDE8A-211ENST00000559742 DDX39AO00148 427 aaKnown RBP20.48■□□□□ 0.87
PDE8A-211ENST00000559742 TBX3O15119 743 aa20.48■□□□□ 0.87
PDE8A-211ENST00000559742 TLR2O60603 784 aa20.48■□□□□ 0.87
PDE8A-211ENST00000559742 KCNH2Q12809 1159 aa20.48■□□□□ 0.87
PDE8A-211ENST00000559742 NBPF9Q3BBW0 867 aa20.48■□□□□ 0.87
PDE8A-211ENST00000559742 EMC10Q5UCC4 262 aa20.48■□□□□ 0.87
PDE8A-211ENST00000559742 C6orf89Q6UWU4 347 aa20.48■□□□□ 0.87
PDE8A-211ENST00000559742 HDAC9Q9UKV0 1011 aa20.48■□□□□ 0.87
PDE8A-211ENST00000559742 CETN3O15182 167 aa20.48■□□□□ 0.87
PDE8A-211ENST00000559742 ECM2O94769 699 aaPredicted RBP20.48■□□□□ 0.87
PDE8A-211ENST00000559742 MAGEA1P43355 309 aa20.48■□□□□ 0.87
PDE8A-211ENST00000559742 DNA2P51530 1060 aa20.48■□□□□ 0.87
PDE8A-211ENST00000559742 SEC24CP53992 1094 aa20.48■□□□□ 0.87
PDE8A-211ENST00000559742 TCERG1LQ5VWI1 586 aa20.48■□□□□ 0.87
PDE8A-211ENST00000559742 HGSNATQ68CP4 663 aa20.48■□□□□ 0.87
PDE8A-211ENST00000559742 TRMT1LQ7Z2T5 733 aaKnown RBP20.48■□□□□ 0.87
PDE8A-211ENST00000559742 FAM228AQ86W67 206 aa20.48■□□□□ 0.87
PDE8A-211ENST00000559742 PARP9Q8IXQ6 854 aa20.48■□□□□ 0.87
PDE8A-211ENST00000559742 DYDC2Q96IM9 177 aa20.48■□□□□ 0.87
PDE8A-211ENST00000559742 PURBQ96QR8 312 aaKnown RBP20.48■□□□□ 0.87
PDE8A-211ENST00000559742 SNX12Q9UMY4 172 aa20.48■□□□□ 0.87
PDE8A-211ENST00000559742 USO1O60763 962 aaKnown RBP20.47■□□□□ 0.87
PDE8A-211ENST00000559742 DPEP1P16444 411 aa20.47■□□□□ 0.87
PDE8A-211ENST00000559742 FMNL3Q8IVF7 1028 aa20.47■□□□□ 0.87
PDE8A-211ENST00000559742 FAM133AQ8N9E0 248 aa20.47■□□□□ 0.87
PDE8A-211ENST00000559742 SPATA4Q8NEY3 305 aa20.47■□□□□ 0.87
PDE8A-211ENST00000559742 CEP63Q96MT8 703 aa20.47■□□□□ 0.87
PDE8A-211ENST00000559742 CAMKK2Q96RR4 588 aa20.47■□□□□ 0.87
PDE8A-211ENST00000559742 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.47■□□□□ 0.87
PDE8A-211ENST00000559742 SH2D4AQ9H788 454 aa20.47■□□□□ 0.87
PDE8A-211ENST00000559742 SLC24A3Q9HC58 644 aa20.47■□□□□ 0.87
PDE8A-211ENST00000559742 PITPNM2Q9BZ72 1349 aa20.47■□□□□ 0.87
PDE8A-211ENST00000559742 GCOM1H8Y6P7 765 aaPredicted RBP20.47■□□□□ 0.87
PDE8A-211ENST00000559742 KIF3CO14782 793 aa20.47■□□□□ 0.87
PDE8A-211ENST00000559742 NCK2O43639 380 aa20.47■□□□□ 0.87
PDE8A-211ENST00000559742 POLR2MP0CAP2 368 aa20.47■□□□□ 0.87
PDE8A-211ENST00000559742 CIITAP33076 1130 aa20.47■□□□□ 0.87
PDE8A-211ENST00000559742 CASP4P49662 377 aa20.47■□□□□ 0.87
PDE8A-211ENST00000559742 CYB5D1Q6P9G0 228 aa20.47■□□□□ 0.87
PDE8A-211ENST00000559742 SMARCAL1Q9NZC9 954 aa20.47■□□□□ 0.87
PDE8A-211ENST00000559742 STIM2Q9P246 746 aa20.47■□□□□ 0.87
PDE8A-211ENST00000559742 FAM170AA1A519 330 aa20.46■□□□□ 0.87
PDE8A-211ENST00000559742 TBCAO75347 108 aaKnown RBP20.46■□□□□ 0.87
PDE8A-211ENST00000559742 SLC9A1P19634 815 aa20.46■□□□□ 0.87
PDE8A-211ENST00000559742 KNOP1Q1ED39 458 aaKnown RBP20.46■□□□□ 0.87
PDE8A-211ENST00000559742 ZC2HC1CQ53FD0 456 aaPredicted RBP20.46■□□□□ 0.87
PDE8A-211ENST00000559742 SFMBT2Q5VUG0 894 aa20.46■□□□□ 0.87
PDE8A-211ENST00000559742 OTOP1Q7RTM1 612 aa20.46■□□□□ 0.87
PDE8A-211ENST00000559742 MAGEC3Q8TD91 643 aa20.46■□□□□ 0.87
PDE8A-211ENST00000559742 CCDC114Q96M63 670 aa20.46■□□□□ 0.87
PDE8A-211ENST00000559742 TRIM6Q9C030 488 aaPredicted RBP20.46■□□□□ 0.87
PDE8A-211ENST00000559742 ACTR5Q9H9F9 607 aaPredicted RBP20.46■□□□□ 0.87
PDE8A-211ENST00000559742 RTN2O75298 545 aa20.46■□□□□ 0.87
PDE8A-211ENST00000559742 FAM107AO95990 144 aa20.46■□□□□ 0.87
PDE8A-211ENST00000559742 VIL1P09327 827 aaKnown RBP20.46■□□□□ 0.87
PDE8A-211ENST00000559742 NR1D1P20393 614 aa20.46■□□□□ 0.87
PDE8A-211ENST00000559742 TNFRSF8P28908 595 aa20.46■□□□□ 0.87
PDE8A-211ENST00000559742 SPDYE2Q495Y8 402 aa20.46■□□□□ 0.87
PDE8A-211ENST00000559742 DNAAF5Q86Y56 855 aa20.46■□□□□ 0.87
PDE8A-211ENST00000559742 AGBL1Q96MI9 1066 aa20.46■□□□□ 0.87
PDE8A-211ENST00000559742 EHD2Q9NZN4 543 aa20.46■□□□□ 0.87
PDE8A-211ENST00000559742 CEP72Q9P209 647 aa20.46■□□□□ 0.87
PDE8A-211ENST00000559742 ZNF233A6NK53 670 aa20.45■□□□□ 0.86
PDE8A-211ENST00000559742 PIK3CDO00329 1044 aa20.45■□□□□ 0.86
PDE8A-211ENST00000559742 AKAP3O75969 853 aa20.45■□□□□ 0.86
PDE8A-211ENST00000559742 SLITRK3O94933 977 aa20.45■□□□□ 0.86
PDE8A-211ENST00000559742 ARP10275 920 aa20.45■□□□□ 0.86
PDE8A-211ENST00000559742 NMT1P30419 496 aaKnown RBP20.45■□□□□ 0.86
PDE8A-211ENST00000559742 CLNS1AP54105 237 aaKnown RBP20.45■□□□□ 0.86
PDE8A-211ENST00000559742 NAIF1Q69YI7 327 aaPredicted RBP20.45■□□□□ 0.86
PDE8A-211ENST00000559742 NFRKBQ6P4R8 1299 aa20.45■□□□□ 0.86
PDE8A-211ENST00000559742 DEFB132Q7Z7B7 95 aa20.45■□□□□ 0.86
PDE8A-211ENST00000559742 CCDC50Q8IVM0 306 aa20.45■□□□□ 0.86
PDE8A-211ENST00000559742 FUKQ8N0W3 1084 aa20.45■□□□□ 0.86
PDE8A-211ENST00000559742 GMLQ99445 158 aa20.45■□□□□ 0.86
PDE8A-211ENST00000559742 WRAP73Q9P2S5 460 aaPredicted RBP20.45■□□□□ 0.86
PDE8A-211ENST00000559742 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.45■□□□□ 0.86
PDE8A-211ENST00000559742 PCDHB13Q9Y5F0 798 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms