RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 KLRC4O43908 158 aa18.38■□□□□ 0.53
TPM1-219ENST00000559397 MYL5Q02045 173 aa18.38■□□□□ 0.53
TPM1-219ENST00000559397 KIAA0753Q2KHM9 967 aa18.38■□□□□ 0.53
TPM1-219ENST00000559397 TRMT1LQ7Z2T5 733 aaKnown RBP18.38■□□□□ 0.53
TPM1-219ENST00000559397 NRBP2Q9NSY0 501 aa18.38■□□□□ 0.53
TPM1-219ENST00000559397 ANKEF1Q9NU02 776 aa18.38■□□□□ 0.53
TPM1-219ENST00000559397 DBR1Q9UK59 544 aaKnown RBP18.38■□□□□ 0.53
TPM1-219ENST00000559397 LOXHD1Q8IVV2 1947 aa18.37■□□□□ 0.53
TPM1-219ENST00000559397 GRIN2DO15399 1336 aa18.37■□□□□ 0.53
TPM1-219ENST00000559397 HBP1O60381 514 aa18.37■□□□□ 0.53
TPM1-219ENST00000559397 CABYRO75952 493 aa18.37■□□□□ 0.53
TPM1-219ENST00000559397 EYA4O95677 639 aa18.37■□□□□ 0.53
TPM1-219ENST00000559397 CAPN2P17655 700 aa18.37■□□□□ 0.53
TPM1-219ENST00000559397 ERCC5P28715 1186 aaPredicted RBP18.37■□□□□ 0.53
TPM1-219ENST00000559397 AMPD3Q01432 767 aa18.37■□□□□ 0.53
TPM1-219ENST00000559397 PLA2G4FQ68DD2 849 aa18.37■□□□□ 0.53
TPM1-219ENST00000559397 CNNM4Q6P4Q7 775 aa18.37■□□□□ 0.53
TPM1-219ENST00000559397 RAD54LQ92698 747 aa18.37■□□□□ 0.53
TPM1-219ENST00000559397 CEP89Q96ST8 783 aa18.37■□□□□ 0.53
TPM1-219ENST00000559397 TRIM9Q9C026 710 aa18.37■□□□□ 0.53
TPM1-219ENST00000559397 HSD3B7Q9H2F3 369 aa18.37■□□□□ 0.53
TPM1-219ENST00000559397 SEPT9Q9UHD8 586 aaPredicted RBP18.37■□□□□ 0.53
TPM1-219ENST00000559397 KIAA0100Q14667 2235 aaKnown RBP18.36■□□□□ 0.53
TPM1-219ENST00000559397 ARID2Q68CP9 1835 aa18.36■□□□□ 0.53
TPM1-219ENST00000559397 A0A1W2PQ45 241 aaPredicted RBP18.36■□□□□ 0.53
TPM1-219ENST00000559397 A0A1W2PQY0 241 aa18.36■□□□□ 0.53
TPM1-219ENST00000559397 ZBTB42B2RXF5 422 aa18.36■□□□□ 0.53
TPM1-219ENST00000559397 PPP1R3GB7ZBB8 358 aa18.36■□□□□ 0.53
TPM1-219ENST00000559397 RARRES1P49788 294 aa18.36■□□□□ 0.53
TPM1-219ENST00000559397 TARBP2Q15633 366 aaKnown RBP18.36■□□□□ 0.53
TPM1-219ENST00000559397 SV2BQ7L1I2 683 aa18.36■□□□□ 0.53
TPM1-219ENST00000559397 OTUD6AQ7L8S5 288 aa18.36■□□□□ 0.53
TPM1-219ENST00000559397 ANKLE1Q8NAG6 615 aa18.36■□□□□ 0.53
TPM1-219ENST00000559397 ENOX1Q8TC92 643 aaKnown RBP18.36■□□□□ 0.53
TPM1-219ENST00000559397 LARP4BQ92615 738 aaKnown RBP18.36■□□□□ 0.53
TPM1-219ENST00000559397 TRPC6Q9Y210 931 aa18.36■□□□□ 0.53
TPM1-219ENST00000559397 PLA2G4BP0C869 781 aa18.35■□□□□ 0.53
TPM1-219ENST00000559397 SMIM10L2AP0DMW4 78 aa18.35■□□□□ 0.53
TPM1-219ENST00000559397 SMIM10L2BP0DMW5 78 aa18.35■□□□□ 0.53
TPM1-219ENST00000559397 INSRRP14616 1297 aa18.35■□□□□ 0.53
TPM1-219ENST00000559397 CD44P16070 742 aaKnown RBP18.35■□□□□ 0.53
TPM1-219ENST00000559397 ZNF75DP51815 510 aa18.35■□□□□ 0.53
TPM1-219ENST00000559397 SLC12A3P55017 1021 aa18.35■□□□□ 0.53
TPM1-219ENST00000559397 NPEPPSP55786 919 aa18.35■□□□□ 0.53
TPM1-219ENST00000559397 PLCB2Q00722 1185 aa18.35■□□□□ 0.53
TPM1-219ENST00000559397 ZNF658Q5TYW1 1059 aaPredicted RBP18.35■□□□□ 0.53
TPM1-219ENST00000559397 SYT2Q8N9I0 419 aaPredicted RBP18.35■□□□□ 0.53
TPM1-219ENST00000559397 PPP1R13LQ8WUF5 828 aa18.35■□□□□ 0.53
TPM1-219ENST00000559397 GLT1D1Q96MS3 346 aa18.35■□□□□ 0.53
TPM1-219ENST00000559397 MED15Q96RN5 788 aa18.35■□□□□ 0.53
TPM1-219ENST00000559397 SH2D3AQ9BRG2 576 aa18.35■□□□□ 0.53
TPM1-219ENST00000559397 BHMT2Q9H2M3 363 aa18.35■□□□□ 0.53
TPM1-219ENST00000559397 RHOBTB3O94955 611 aa18.34■□□□□ 0.53
TPM1-219ENST00000559397 MCM6Q14566 821 aa18.34■□□□□ 0.53
TPM1-219ENST00000559397 NBPF20Q3BBV1 942 aa18.34■□□□□ 0.53
TPM1-219ENST00000559397 HS1BP3Q53T59 392 aa18.34■□□□□ 0.53
TPM1-219ENST00000559397 CYP26B1Q9NR63 512 aa18.34■□□□□ 0.53
TPM1-219ENST00000559397 COL1A2P08123 1366 aa18.34■□□□□ 0.53
TPM1-219ENST00000559397 MYMKA6NI61 221 aa18.34■□□□□ 0.53
TPM1-219ENST00000559397 HOXC8P31273 242 aa18.34■□□□□ 0.53
TPM1-219ENST00000559397 CHMP4BP1P59074 171 aa18.34■□□□□ 0.53
TPM1-219ENST00000559397 TPM4P67936 248 aa18.34■□□□□ 0.53
TPM1-219ENST00000559397 PPFIA1Q13136 1202 aa18.34■□□□□ 0.53
TPM1-219ENST00000559397 HIC1Q14526 733 aa18.34■□□□□ 0.53
TPM1-219ENST00000559397 MTERF2Q49AM1 385 aa18.34■□□□□ 0.53
TPM1-219ENST00000559397 KMT5BQ4FZB7 885 aa18.34■□□□□ 0.53
TPM1-219ENST00000559397 XKR9Q5GH70 373 aa18.34■□□□□ 0.53
TPM1-219ENST00000559397 ZNF484Q5JVG2 852 aa18.34■□□□□ 0.53
TPM1-219ENST00000559397 SESTD1Q86VW0 696 aa18.34■□□□□ 0.53
TPM1-219ENST00000559397 CEP170P1Q96L14 293 aa18.34■□□□□ 0.53
TPM1-219ENST00000559397 LRRC27Q9C0I9 530 aa18.34■□□□□ 0.53
TPM1-219ENST00000559397 HDAC6Q9UBN7 1215 aa18.34■□□□□ 0.53
TPM1-219ENST00000559397 KAT6AQ92794 2004 aa18.34■□□□□ 0.53
TPM1-219ENST00000559397 COL6A1P12109 1028 aa18.33■□□□□ 0.52
TPM1-219ENST00000559397 ADAM17P78536 824 aa18.33■□□□□ 0.52
TPM1-219ENST00000559397 ITGA7Q13683 1181 aa18.33■□□□□ 0.52
TPM1-219ENST00000559397 GRIK4Q16099 956 aa18.33■□□□□ 0.52
TPM1-219ENST00000559397 NFRKBQ6P4R8 1299 aa18.33■□□□□ 0.52
TPM1-219ENST00000559397 SLC43A3Q8NBI5 491 aa18.33■□□□□ 0.52
TPM1-219ENST00000559397 DIS3LQ8TF46 1054 aaKnown RBP18.33■□□□□ 0.52
TPM1-219ENST00000559397 TRAPPC12Q8WVT3 735 aa18.33■□□□□ 0.52
TPM1-219ENST00000559397 GTPBP4Q9BZE4 634 aaKnown RBP18.33■□□□□ 0.52
TPM1-219ENST00000559397 TRIM5Q9C035 493 aa18.33■□□□□ 0.52
TPM1-219ENST00000559397 STARD7Q9NQZ5 370 aa18.33■□□□□ 0.52
TPM1-219ENST00000559397 PPME1Q9Y570 386 aa18.33■□□□□ 0.52
TPM1-219ENST00000559397 NRCAMQ92823 1304 aa18.33■□□□□ 0.52
TPM1-219ENST00000559397 ARHGEF35A5YM69 484 aa18.32■□□□□ 0.52
TPM1-219ENST00000559397 CDC25BP30305 580 aa18.32■□□□□ 0.52
TPM1-219ENST00000559397 MARCH8Q5T0T0 291 aa18.32■□□□□ 0.52
TPM1-219ENST00000559397 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.32■□□□□ 0.52
TPM1-219ENST00000559397 SMYD4Q8IYR2 804 aaPredicted RBP18.32■□□□□ 0.52
TPM1-219ENST00000559397 C7orf31Q8N865 590 aa18.32■□□□□ 0.52
TPM1-219ENST00000559397 VTI1AQ96AJ9 217 aa18.32■□□□□ 0.52
TPM1-219ENST00000559397 MRFAP1L1Q96HT8 127 aa18.32■□□□□ 0.52
TPM1-219ENST00000559397 SETD4Q9NVD3 440 aa18.32■□□□□ 0.52
TPM1-219ENST00000559397 GTF2IRD1Q9UHL9 959 aa18.32■□□□□ 0.52
TPM1-219ENST00000559397 PVALEFA0A1B0GWK0 134 aa18.31■□□□□ 0.52
TPM1-219ENST00000559397 RRN3P2A6NIE6 340 aa18.31■□□□□ 0.52
TPM1-219ENST00000559397 CYP11B2P19099 503 aa18.31■□□□□ 0.52
TPM1-219ENST00000559397 EN2P19622 333 aaPredicted RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms