RNA–Protein interactions for RNA: ENST00000553999.5

HIF1A-206, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-206ENST00000553999 ERVK-5Q9HDB9 667 aa23.19■■□□□ 1.3
HIF1A-206ENST00000553999 WRAP73Q9P2S5 460 aaPredicted RBP23.19■■□□□ 1.3
HIF1A-206ENST00000553999 ST3GAL5Q9UNP4 418 aa23.19■■□□□ 1.3
HIF1A-206ENST00000553999 ADGRA3Q8IWK6 1321 aa23.18■■□□□ 1.3
HIF1A-206ENST00000553999 KDM3AQ9Y4C1 1321 aa23.18■■□□□ 1.3
HIF1A-206ENST00000553999 DENND3A2RUS2 1198 aa23.18■■□□□ 1.3
HIF1A-206ENST00000553999 MAGEB2O15479 319 aa23.18■■□□□ 1.3
HIF1A-206ENST00000553999 GPR32O75388 356 aa23.18■■□□□ 1.3
HIF1A-206ENST00000553999 CSDE1O75534 798 aaKnown RBP23.18■■□□□ 1.3
HIF1A-206ENST00000553999 CTNNB1P35222 781 aa23.18■■□□□ 1.3
HIF1A-206ENST00000553999 EPC2Q52LR7 807 aa23.18■■□□□ 1.3
HIF1A-206ENST00000553999 XKR3Q5GH77 459 aa23.18■■□□□ 1.3
HIF1A-206ENST00000553999 FAM228AQ86W67 206 aa23.18■■□□□ 1.3
HIF1A-206ENST00000553999 FIBCD1Q8N539 461 aa23.18■■□□□ 1.3
HIF1A-206ENST00000553999 RGL1Q9NZL6 768 aa23.18■■□□□ 1.3
HIF1A-206ENST00000553999 THEGQ9P2T0 379 aa23.18■■□□□ 1.3
HIF1A-206ENST00000553999 STBD1O95210 358 aa23.17■■□□□ 1.3
HIF1A-206ENST00000553999 TMOD1P28289 359 aa23.17■■□□□ 1.3
HIF1A-206ENST00000553999 NPEPPSP55786 919 aa23.17■■□□□ 1.3
HIF1A-206ENST00000553999 PSMC5P62195 406 aa23.17■■□□□ 1.3
HIF1A-206ENST00000553999 TFF2Q03403 129 aa23.17■■□□□ 1.3
HIF1A-206ENST00000553999 PPP2R5CQ13362 524 aa23.17■■□□□ 1.3
HIF1A-206ENST00000553999 BTG3Q14201 252 aaPredicted RBP23.17■■□□□ 1.3
HIF1A-206ENST00000553999 CTTNQ14247 550 aaKnown RBP23.17■■□□□ 1.3
HIF1A-206ENST00000553999 CALCRLQ16602 461 aa23.17■■□□□ 1.3
HIF1A-206ENST00000553999 TMEM192Q8IY95 271 aa23.17■■□□□ 1.3
HIF1A-206ENST00000553999 FAM184AQ8NB25 1140 aa23.17■■□□□ 1.3
HIF1A-206ENST00000553999 NLRP7Q8WX94 980 aa23.17■■□□□ 1.3
HIF1A-206ENST00000553999 DYDC2Q96IM9 177 aa23.17■■□□□ 1.3
HIF1A-206ENST00000553999 FAM20AQ96MK3 541 aa23.17■■□□□ 1.3
HIF1A-206ENST00000553999 ADAM2Q99965 735 aa23.17■■□□□ 1.3
HIF1A-206ENST00000553999 LRFN2Q9ULH4 789 aa23.17■■□□□ 1.3
HIF1A-206ENST00000553999 PRRC2BQ5JSZ5 2229 aaKnown RBP23.16■■□□□ 1.3
HIF1A-206ENST00000553999 MCM7P33993 719 aa23.16■■□□□ 1.3
HIF1A-206ENST00000553999 CRYBB1P53674 252 aaPredicted RBP23.16■■□□□ 1.3
HIF1A-206ENST00000553999 SAFBQ15424 915 aaKnown RBP eCLIP23.16■■□□□ 1.3
HIF1A-206ENST00000553999 ANO5Q75V66 913 aa23.16■■□□□ 1.3
HIF1A-206ENST00000553999 LINC01465Q8N7H1 131 aa23.16■■□□□ 1.3
HIF1A-206ENST00000553999 ZNF579Q8NAF0 562 aaKnown RBP23.16■■□□□ 1.3
HIF1A-206ENST00000553999 ZSCAN31Q96LW9 406 aaPredicted RBP23.16■■□□□ 1.3
HIF1A-206ENST00000553999 NAP1L4Q99733 375 aaKnown RBP23.16■■□□□ 1.3
HIF1A-206ENST00000553999 LXNQ9BS40 222 aa23.16■■□□□ 1.3
HIF1A-206ENST00000553999 FTHL17Q9BXU8 183 aa23.16■■□□□ 1.3
HIF1A-206ENST00000553999 TSPYL2Q9H2G4 693 aaPredicted RBP23.16■■□□□ 1.3
HIF1A-206ENST00000553999 SQORQ9Y6N5 450 aa23.16■■□□□ 1.3
HIF1A-206ENST00000553999 NEMFO60524 1076 aa23.15■■□□□ 1.3
HIF1A-206ENST00000553999 BAG4O95429 457 aaKnown RBP23.15■■□□□ 1.3
HIF1A-206ENST00000553999 TXKP42681 527 aa23.15■■□□□ 1.3
HIF1A-206ENST00000553999 RBM25P49756 843 aaKnown RBP23.15■■□□□ 1.3
HIF1A-206ENST00000553999 GPM6BQ13491 265 aa23.15■■□□□ 1.3
HIF1A-206ENST00000553999 GNL2Q13823 731 aaKnown RBP23.15■■□□□ 1.3
HIF1A-206ENST00000553999 TARBP2Q15633 366 aaKnown RBP23.15■■□□□ 1.3
HIF1A-206ENST00000553999 ZBTB39O15060 712 aa23.14■■□□□ 1.29
HIF1A-206ENST00000553999 GPR182O15218 404 aa23.14■■□□□ 1.29
HIF1A-206ENST00000553999 CD2BP2O95400 341 aaKnown RBP23.14■■□□□ 1.29
HIF1A-206ENST00000553999 QARSP47897 775 aaKnown RBP23.14■■□□□ 1.29
HIF1A-206ENST00000553999 GPC3P51654 580 aa23.14■■□□□ 1.29
HIF1A-206ENST00000553999 RABEP1Q15276 862 aa23.14■■□□□ 1.29
HIF1A-206ENST00000553999 NPAS4Q8IUM7 802 aa23.14■■□□□ 1.29
HIF1A-206ENST00000553999 KSR1Q8IVT5 923 aa23.14■■□□□ 1.29
HIF1A-206ENST00000553999 RNF169Q8NCN4 708 aa23.14■■□□□ 1.29
HIF1A-206ENST00000553999 CEP170P1Q96L14 293 aa23.14■■□□□ 1.29
HIF1A-206ENST00000553999 NIFKQ9BYG3 293 aaKnown RBP23.14■■□□□ 1.29
HIF1A-206ENST00000553999 ADAMTS10Q9H324 1103 aa23.14■■□□□ 1.29
HIF1A-206ENST00000553999 UPF2Q9HAU5 1272 aaKnown RBP23.14■■□□□ 1.29
HIF1A-206ENST00000553999 SH2B1Q9NRF2 756 aaPredicted RBP23.14■■□□□ 1.29
HIF1A-206ENST00000553999 MRPL42Q9Y6G3 142 aaKnown RBP23.14■■□□□ 1.29
HIF1A-206ENST00000553999 COL4A6Q14031 1691 aa23.13■■□□□ 1.29
HIF1A-206ENST00000553999 A0A087WWV3 80 aa23.13■■□□□ 1.29
HIF1A-206ENST00000553999 TBX3O15119 743 aa23.13■■□□□ 1.29
HIF1A-206ENST00000553999 DGKIO75912 1065 aa23.13■■□□□ 1.29
HIF1A-206ENST00000553999 RHPN2Q8IUC4 686 aa23.13■■□□□ 1.29
HIF1A-206ENST00000553999 TPH2Q8IWU9 490 aa23.13■■□□□ 1.29
HIF1A-206ENST00000553999 SLFN12Q8IYM2 578 aa23.13■■□□□ 1.29
HIF1A-206ENST00000553999 NLRP4Q96MN2 994 aa23.13■■□□□ 1.29
HIF1A-206ENST00000553999 LLPHQ9BRT6 129 aaKnown RBP23.13■■□□□ 1.29
HIF1A-206ENST00000553999 TMEM60Q9H2L4 133 aa23.13■■□□□ 1.29
HIF1A-206ENST00000553999 RC3H2Q9HBD1 1191 aaKnown RBP23.13■■□□□ 1.29
HIF1A-206ENST00000553999 HCSTQ9UBK5 93 aa23.13■■□□□ 1.29
HIF1A-206ENST00000553999 PRUNE2Q8WUY3 3088 aa23.13■■□□□ 1.29
HIF1A-206ENST00000553999 POTEMA6NI47 508 aa23.12■■□□□ 1.29
HIF1A-206ENST00000553999 STAG3L1P0CL83 205 aa23.12■■□□□ 1.29
HIF1A-206ENST00000553999 FGFR1P11362 822 aa23.12■■□□□ 1.29
HIF1A-206ENST00000553999 SPIRE1Q08AE8 756 aa23.12■■□□□ 1.29
HIF1A-206ENST00000553999 NBR1Q14596 966 aa23.12■■□□□ 1.29
HIF1A-206ENST00000553999 EPHA7Q15375 998 aa23.12■■□□□ 1.29
HIF1A-206ENST00000553999 ZNF174Q15697 407 aa23.12■■□□□ 1.29
HIF1A-206ENST00000553999 NLRC5Q86WI3 1866 aa23.12■■□□□ 1.29
HIF1A-206ENST00000553999 CEP89Q96ST8 783 aa23.12■■□□□ 1.29
HIF1A-206ENST00000553999 TTC12Q9H892 705 aaPredicted RBP23.12■■□□□ 1.29
HIF1A-206ENST00000553999 CYP26B1Q9NR63 512 aa23.12■■□□□ 1.29
HIF1A-206ENST00000553999 SUCLA2Q9P2R7 463 aaPredicted RBP23.12■■□□□ 1.29
HIF1A-206ENST00000553999 PCDHB7Q9Y5E2 793 aa23.12■■□□□ 1.29
HIF1A-206ENST00000553999 A0A087WZ62 844 aa23.11■■□□□ 1.29
HIF1A-206ENST00000553999 TBKBP1A7MCY6 615 aa23.11■■□□□ 1.29
HIF1A-206ENST00000553999 P4HBP07237 508 aaKnown RBP23.11■■□□□ 1.29
HIF1A-206ENST00000553999 SARSP49591 514 aaKnown RBP23.11■■□□□ 1.29
HIF1A-206ENST00000553999 KCNQ1P51787 676 aa23.11■■□□□ 1.29
HIF1A-206ENST00000553999 POLGP54098 1239 aaPredicted RBP23.11■■□□□ 1.29
HIF1A-206ENST00000553999 HMGN5P82970 282 aaKnown RBP23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms