RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 RTP5Q14D33 572 aa6.87□□□□□ -1.31
SYNE2-210ENST00000553455 UGT8Q16880 541 aa6.87□□□□□ -1.31
SYNE2-210ENST00000553455 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.87□□□□□ -1.31
SYNE2-210ENST00000553455 TOR2AQ5JU69 321 aa6.87□□□□□ -1.31
SYNE2-210ENST00000553455 TIGD7Q6NT04 549 aaPredicted RBP6.87□□□□□ -1.31
SYNE2-210ENST00000553455 PRR23BQ6ZRT6 265 aa6.87□□□□□ -1.31
SYNE2-210ENST00000553455 B3GNT8Q7Z7M8 397 aa6.87□□□□□ -1.31
SYNE2-210ENST00000553455 SLC41A1Q8IVJ1 513 aa6.87□□□□□ -1.31
SYNE2-210ENST00000553455 TCEAL8Q8IYN2 117 aa6.87□□□□□ -1.31
SYNE2-210ENST00000553455 SMARCC2Q8TAQ2 1214 aa6.87□□□□□ -1.31
SYNE2-210ENST00000553455 FERMT2Q96AC1 680 aa6.87□□□□□ -1.31
SYNE2-210ENST00000553455 DIRC2Q96SL1 478 aa6.87□□□□□ -1.31
SYNE2-210ENST00000553455 WNT8AQ9H1J5 351 aa6.87□□□□□ -1.31
SYNE2-210ENST00000553455 NSUN3Q9H649 340 aaKnown RBP6.87□□□□□ -1.31
SYNE2-210ENST00000553455 DLL4Q9NR61 685 aa6.87□□□□□ -1.31
SYNE2-210ENST00000553455 NOB1Q9ULX3 412 aaKnown RBP6.87□□□□□ -1.31
SYNE2-210ENST00000553455 EDARQ9UNE0 448 aa6.87□□□□□ -1.31
SYNE2-210ENST00000553455 KLHL33A6NCF5 533 aa6.86□□□□□ -1.31
SYNE2-210ENST00000553455 IL18BPO95998 194 aa6.86□□□□□ -1.31
SYNE2-210ENST00000553455 CYP2C8P10632 490 aa6.86□□□□□ -1.31
SYNE2-210ENST00000553455 PF4V1P10720 104 aa6.86□□□□□ -1.31
SYNE2-210ENST00000553455 ECE1P42892 770 aa6.86□□□□□ -1.31
SYNE2-210ENST00000553455 ITGA1P56199 1179 aa6.86□□□□□ -1.31
SYNE2-210ENST00000553455 ADAM9Q13443 819 aa6.86□□□□□ -1.31
SYNE2-210ENST00000553455 TRIM25Q14258 630 aaKnown RBP6.86□□□□□ -1.31
SYNE2-210ENST00000553455 NOLC1Q14978 699 aaKnown RBP eCLIP6.86□□□□□ -1.31
SYNE2-210ENST00000553455 CLUL1Q15846 466 aa6.86□□□□□ -1.31
SYNE2-210ENST00000553455 PHF19Q5T6S3 580 aa6.86□□□□□ -1.31
SYNE2-210ENST00000553455 TTLL7Q6ZT98 887 aa6.86□□□□□ -1.31
SYNE2-210ENST00000553455 IGDCC3Q8IVU1 814 aa6.86□□□□□ -1.31
SYNE2-210ENST00000553455 MYO1HQ8N1T3 1032 aa6.86□□□□□ -1.31
SYNE2-210ENST00000553455 GORASP1Q9BQQ3 440 aa6.86□□□□□ -1.31
SYNE2-210ENST00000553455 BTBD2Q9BX70 525 aa6.86□□□□□ -1.31
SYNE2-210ENST00000553455 EPB41L4BQ9H329 900 aa6.86□□□□□ -1.31
SYNE2-210ENST00000553455 KCTD10Q9H3F6 313 aa6.86□□□□□ -1.31
SYNE2-210ENST00000553455 SIRT5Q9NXA8 310 aa6.86□□□□□ -1.31
SYNE2-210ENST00000553455 KCNG1Q9UIX4 513 aa6.86□□□□□ -1.31
SYNE2-210ENST00000553455 DENND2AQ9ULE3 1009 aa6.86□□□□□ -1.31
SYNE2-210ENST00000553455 INVSQ9Y283 1065 aa6.86□□□□□ -1.31
SYNE2-210ENST00000553455 GPR45Q9Y5Y3 372 aa6.86□□□□□ -1.31
SYNE2-210ENST00000553455 MRFAP1Q9Y605 127 aa6.86□□□□□ -1.31
SYNE2-210ENST00000553455 NUMBLQ9Y6R0 609 aa6.86□□□□□ -1.31
SYNE2-210ENST00000553455 TEX51A0A1B0GUA7 166 aa6.85□□□□□ -1.31
SYNE2-210ENST00000553455 CELA3BP08861 270 aa6.85□□□□□ -1.31
SYNE2-210ENST00000553455 OSMP13725 252 aa6.85□□□□□ -1.31
SYNE2-210ENST00000553455 EPHB3P54753 998 aa6.85□□□□□ -1.31
SYNE2-210ENST00000553455 TBX4P57082 545 aa6.85□□□□□ -1.31
SYNE2-210ENST00000553455 IL13RA1P78552 427 aa6.85□□□□□ -1.31
SYNE2-210ENST00000553455 MRPS9P82933 396 aaKnown RBP6.85□□□□□ -1.31
SYNE2-210ENST00000553455 STILQ15468 1287 aa6.85□□□□□ -1.31
SYNE2-210ENST00000553455 TARBP2Q15633 366 aaKnown RBP6.85□□□□□ -1.31
SYNE2-210ENST00000553455 KANK2Q63ZY3 851 aa6.85□□□□□ -1.31
SYNE2-210ENST00000553455 C14orf80Q86SX3 495 aa6.85□□□□□ -1.31
SYNE2-210ENST00000553455 TPH2Q8IWU9 490 aa6.85□□□□□ -1.31
SYNE2-210ENST00000553455 MAGEB6Q8N7X4 407 aa6.85□□□□□ -1.31
SYNE2-210ENST00000553455 CALML6Q8TD86 181 aa6.85□□□□□ -1.31
SYNE2-210ENST00000553455 RELTQ969Z4 430 aa6.85□□□□□ -1.31
SYNE2-210ENST00000553455 TMEM209Q96SK2 561 aa6.85□□□□□ -1.31
SYNE2-210ENST00000553455 PITHD1Q9GZP4 211 aaPredicted RBP6.85□□□□□ -1.31
SYNE2-210ENST00000553455 OR10A5Q9H207 317 aa6.85□□□□□ -1.31
SYNE2-210ENST00000553455 ANKRD6Q9Y2G4 727 aa6.85□□□□□ -1.31
SYNE2-210ENST00000553455 GIT1Q9Y2X7 761 aa6.85□□□□□ -1.31
SYNE2-210ENST00000553455 MYPNQ86TC9 1320 aa6.84□□□□□ -1.31
SYNE2-210ENST00000553455 ST20-MTHFSA0A0A6YYL1 179 aa6.84□□□□□ -1.31
SYNE2-210ENST00000553455 MAFO75444 373 aaPredicted RBP6.84□□□□□ -1.31
SYNE2-210ENST00000553455 C5AR1P21730 350 aa6.84□□□□□ -1.31
SYNE2-210ENST00000553455 MLC1Q15049 377 aa6.84□□□□□ -1.31
SYNE2-210ENST00000553455 ACAP2Q15057 778 aa6.84□□□□□ -1.31
SYNE2-210ENST00000553455 MUM1Q2TAK8 710 aa6.84□□□□□ -1.31
SYNE2-210ENST00000553455 EFCAB2Q5VUJ9 269 aa6.84□□□□□ -1.31
SYNE2-210ENST00000553455 STK32CQ86UX6 486 aa6.84□□□□□ -1.31
SYNE2-210ENST00000553455 TTC8Q8TAM2 541 aa6.84□□□□□ -1.31
SYNE2-210ENST00000553455 MZB1Q8WU39 189 aa6.84□□□□□ -1.31
SYNE2-210ENST00000553455 TSPEARQ8WU66 669 aa6.84□□□□□ -1.31
SYNE2-210ENST00000553455 SSH1Q8WYL5 1049 aa6.84□□□□□ -1.31
SYNE2-210ENST00000553455 RAX2Q96IS3 184 aa6.84□□□□□ -1.31
SYNE2-210ENST00000553455 ZSWIM3Q96MP5 696 aa6.84□□□□□ -1.31
SYNE2-210ENST00000553455 NOX5Q96PH1 765 aa6.84□□□□□ -1.31
SYNE2-210ENST00000553455 SGPP1Q9BX95 441 aa6.84□□□□□ -1.31
SYNE2-210ENST00000553455 MTG2Q9H4K7 406 aa6.84□□□□□ -1.31
SYNE2-210ENST00000553455 GCM1Q9NP62 436 aa6.84□□□□□ -1.31
SYNE2-210ENST00000553455 DCP1AQ9NPI6 582 aaPredicted RBP6.84□□□□□ -1.31
SYNE2-210ENST00000553455 KCND1Q9NSA2 647 aa6.84□□□□□ -1.31
SYNE2-210ENST00000553455 ARHGAP20Q9P2F6 1191 aa6.84□□□□□ -1.31
SYNE2-210ENST00000553455 ZFP69BQ9UJL9 534 aa6.84□□□□□ -1.31
SYNE2-210ENST00000553455 PNMA8BQ9ULN7 279 aaPredicted RBP6.84□□□□□ -1.31
SYNE2-210ENST00000553455 OPHN1O60890 802 aa6.83□□□□□ -1.32
SYNE2-210ENST00000553455 PCDH8O95206 1070 aa6.83□□□□□ -1.32
SYNE2-210ENST00000553455 PFKLP17858 780 aa6.83□□□□□ -1.32
SYNE2-210ENST00000553455 APEX1P27695 318 aaKnown RBP6.83□□□□□ -1.32
SYNE2-210ENST00000553455 GLRBP48167 497 aa6.83□□□□□ -1.32
SYNE2-210ENST00000553455 LGALS4P56470 323 aa6.83□□□□□ -1.32
SYNE2-210ENST00000553455 BCAR1P56945 870 aa6.83□□□□□ -1.32
SYNE2-210ENST00000553455 TCIRG1Q13488 830 aa6.83□□□□□ -1.32
SYNE2-210ENST00000553455 CXorf57Q6NSI4 855 aaKnown RBP6.83□□□□□ -1.32
SYNE2-210ENST00000553455 NBPF11Q86T75 865 aa6.83□□□□□ -1.32
SYNE2-210ENST00000553455 Q8N3U1 123 aa6.83□□□□□ -1.32
SYNE2-210ENST00000553455 AUTS2Q8WXX7 1259 aa6.83□□□□□ -1.32
SYNE2-210ENST00000553455 HSPBAP1Q96EW2 488 aa6.83□□□□□ -1.32
SYNE2-210ENST00000553455 SLC2A13Q96QE2 648 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms