RNA–Protein interactions for RNA: ENST00000553340.1

SYNE3-202, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

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Gene SYNE3, Length 2,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-202ENST00000553340 GTPBP10A4D1E9 387 aaKnown RBP19.07■□□□□ 0.64
SYNE3-202ENST00000553340 UFL1O94874 794 aa19.07■□□□□ 0.64
SYNE3-202ENST00000553340 STAT1P42224 750 aa19.07■□□□□ 0.64
SYNE3-202ENST00000553340 BYSLQ13895 437 aaKnown RBP19.07■□□□□ 0.64
SYNE3-202ENST00000553340 KCTD19Q17RG1 926 aaPredicted RBP19.07■□□□□ 0.64
SYNE3-202ENST00000553340 PARP9Q8IXQ6 854 aa19.07■□□□□ 0.64
SYNE3-202ENST00000553340 SGSM3Q96HU1 749 aa19.07■□□□□ 0.64
SYNE3-202ENST00000553340 TRIM51Q9BSJ1 452 aa19.07■□□□□ 0.64
SYNE3-202ENST00000553340 CYP3A7-CYP3A51PA0A087WV96 503 aa19.06■□□□□ 0.64
SYNE3-202ENST00000553340 PHF20L1A8MW92 1017 aa19.06■□□□□ 0.64
SYNE3-202ENST00000553340 BUB1BO60566 1050 aaPredicted RBP19.06■□□□□ 0.64
SYNE3-202ENST00000553340 CYP3A7P24462 503 aa19.06■□□□□ 0.64
SYNE3-202ENST00000553340 RFC4P35249 363 aa19.06■□□□□ 0.64
SYNE3-202ENST00000553340 SCTRP47872 440 aa19.06■□□□□ 0.64
SYNE3-202ENST00000553340 GPSM2P81274 684 aa19.06■□□□□ 0.64
SYNE3-202ENST00000553340 SPRED3Q2MJR0 410 aa19.06■□□□□ 0.64
SYNE3-202ENST00000553340 GJB7Q6PEY0 223 aa19.06■□□□□ 0.64
SYNE3-202ENST00000553340 TAX1BP1Q86VP1 789 aa19.06■□□□□ 0.64
SYNE3-202ENST00000553340 CENPTQ96BT3 561 aa19.06■□□□□ 0.64
SYNE3-202ENST00000553340 CHMP6Q96FZ7 201 aa19.06■□□□□ 0.64
SYNE3-202ENST00000553340 NAP1L3Q99457 506 aaPredicted RBP19.06■□□□□ 0.64
SYNE3-202ENST00000553340 ANO3Q9BYT9 981 aa19.06■□□□□ 0.64
SYNE3-202ENST00000553340 STRCQ7RTU9 1775 aa19.06■□□□□ 0.64
SYNE3-202ENST00000553340 DRD4P21917 467 aa19.06■□□□□ 0.64
SYNE3-202ENST00000553340 PTENP60484 403 aa19.06■□□□□ 0.64
SYNE3-202ENST00000553340 PSMC6P62333 389 aa19.06■□□□□ 0.64
SYNE3-202ENST00000553340 PREPLQ4J6C6 727 aaPredicted RBP19.06■□□□□ 0.64
SYNE3-202ENST00000553340 KCTD1Q719H9 257 aa19.06■□□□□ 0.64
SYNE3-202ENST00000553340 ATP8B4Q8TF62 1192 aa19.06■□□□□ 0.64
SYNE3-202ENST00000553340 TXLNGYQ9BZA5 131 aa19.06■□□□□ 0.64
SYNE3-202ENST00000553340 OSGEPQ9NPF4 335 aa19.06■□□□□ 0.64
SYNE3-202ENST00000553340 SPATA31A5Q5VU36 1347 aa19.06■□□□□ 0.64
SYNE3-202ENST00000553340 SPATA31A7Q8IWB4 1347 aa19.06■□□□□ 0.64
SYNE3-202ENST00000553340 GOLGA6L10A0A0M3HER8 536 aa19.05■□□□□ 0.64
SYNE3-202ENST00000553340 MEIS1O00470 390 aa19.05■□□□□ 0.64
SYNE3-202ENST00000553340 LMNB1P20700 586 aa19.05■□□□□ 0.64
SYNE3-202ENST00000553340 CASP4P49662 377 aa19.05■□□□□ 0.64
SYNE3-202ENST00000553340 DR1Q01658 176 aa19.05■□□□□ 0.64
SYNE3-202ENST00000553340 NEDD9Q14511 834 aa19.05■□□□□ 0.64
SYNE3-202ENST00000553340 BMT2Q1RMZ1 405 aa19.05■□□□□ 0.64
SYNE3-202ENST00000553340 ERMARDQ5T6L9 678 aa19.05■□□□□ 0.64
SYNE3-202ENST00000553340 SLC35G2Q8TBE7 412 aa19.05■□□□□ 0.64
SYNE3-202ENST00000553340 TBC1D22AQ8WUA7 517 aa19.05■□□□□ 0.64
SYNE3-202ENST00000553340 RFFLQ8WZ73 363 aa19.05■□□□□ 0.64
SYNE3-202ENST00000553340 MBOAT7Q96N66 472 aa19.05■□□□□ 0.64
SYNE3-202ENST00000553340 XPO6Q96QU8 1125 aaKnown RBP19.05■□□□□ 0.64
SYNE3-202ENST00000553340 KDM4CQ9H3R0 1056 aa19.05■□□□□ 0.64
SYNE3-202ENST00000553340 HAUS2Q9NVX0 235 aa19.05■□□□□ 0.64
SYNE3-202ENST00000553340 EVI5O60447 810 aa19.05■□□□□ 0.64
SYNE3-202ENST00000553340 RPA1P27694 616 aa19.05■□□□□ 0.64
SYNE3-202ENST00000553340 PRPF4BQ13523 1007 aaKnown RBP19.05■□□□□ 0.64
SYNE3-202ENST00000553340 MOXD1Q6UVY6 613 aa19.05■□□□□ 0.64
SYNE3-202ENST00000553340 GIMAP7Q8NHV1 300 aa19.05■□□□□ 0.64
SYNE3-202ENST00000553340 SLC30A5Q8TAD4 765 aa19.05■□□□□ 0.64
SYNE3-202ENST00000553340 LNX1Q8TBB1 728 aaPredicted RBP19.05■□□□□ 0.64
SYNE3-202ENST00000553340 PCDHB13Q9Y5F0 798 aa19.05■□□□□ 0.64
SYNE3-202ENST00000553340 ASTN1O14525 1302 aa19.05■□□□□ 0.64
SYNE3-202ENST00000553340 NCANO14594 1321 aa19.05■□□□□ 0.64
SYNE3-202ENST00000553340 CTNND1O60716 968 aaKnown RBP19.04■□□□□ 0.64
SYNE3-202ENST00000553340 TMEM253P0C7T8 217 aa19.04■□□□□ 0.64
SYNE3-202ENST00000553340 GHRP10912 638 aa19.04■□□□□ 0.64
SYNE3-202ENST00000553340 SPIRE1Q08AE8 756 aa19.04■□□□□ 0.64
SYNE3-202ENST00000553340 BARGINQ6ZT62 677 aa19.04■□□□□ 0.64
SYNE3-202ENST00000553340 CTNNBL1Q8WYA6 563 aaPredicted RBP19.04■□□□□ 0.64
SYNE3-202ENST00000553340 CCT6BQ92526 530 aa19.04■□□□□ 0.64
SYNE3-202ENST00000553340 ERP44Q9BS26 406 aa19.04■□□□□ 0.64
SYNE3-202ENST00000553340 FAM129AQ9BZQ8 928 aa19.04■□□□□ 0.64
SYNE3-202ENST00000553340 CARD9Q9H257 536 aa19.04■□□□□ 0.64
SYNE3-202ENST00000553340 RTCBQ9Y3I0 505 aaKnown RBP19.04■□□□□ 0.64
SYNE3-202ENST00000553340 NR2E1Q9Y466 385 aa19.04■□□□□ 0.64
SYNE3-202ENST00000553340 DAAM1Q9Y4D1 1078 aa19.04■□□□□ 0.64
SYNE3-202ENST00000553340 DDX3YO15523 660 aaKnown RBP19.04■□□□□ 0.64
SYNE3-202ENST00000553340 CAND2O75155 1236 aa19.04■□□□□ 0.64
SYNE3-202ENST00000553340 GCNT3O95395 438 aa19.04■□□□□ 0.64
SYNE3-202ENST00000553340 ATP2B4P23634 1241 aa19.04■□□□□ 0.64
SYNE3-202ENST00000553340 SOX5P35711 763 aa19.04■□□□□ 0.64
SYNE3-202ENST00000553340 GLYCTKQ8IVS8 523 aa19.04■□□□□ 0.64
SYNE3-202ENST00000553340 MDM1Q8TC05 714 aa19.04■□□□□ 0.64
SYNE3-202ENST00000553340 HVCN1Q96D96 273 aa19.04■□□□□ 0.64
SYNE3-202ENST00000553340 LRRC4CQ9HCJ2 640 aa19.04■□□□□ 0.64
SYNE3-202ENST00000553340 GOPCQ9HD26 462 aa19.04■□□□□ 0.64
SYNE3-202ENST00000553340 SERPINB13Q9UIV8 391 aa19.04■□□□□ 0.64
SYNE3-202ENST00000553340 PNMA2Q9UL42 364 aa19.04■□□□□ 0.64
SYNE3-202ENST00000553340 PPP1R9AQ9ULJ8 1098 aa19.04■□□□□ 0.64
SYNE3-202ENST00000553340 DAGLAQ9Y4D2 1042 aa19.04■□□□□ 0.64
SYNE3-202ENST00000553340 CLIC2O15247 247 aa19.04■□□□□ 0.64
SYNE3-202ENST00000553340 ATP2C2O75185 946 aa19.04■□□□□ 0.64
SYNE3-202ENST00000553340 NUDT17P0C025 328 aa19.04■□□□□ 0.64
SYNE3-202ENST00000553340 XRCC4Q13426 336 aa19.04■□□□□ 0.64
SYNE3-202ENST00000553340 DUPD1Q68J44 220 aa19.04■□□□□ 0.64
SYNE3-202ENST00000553340 GGA1Q9UJY5 639 aa19.04■□□□□ 0.64
SYNE3-202ENST00000553340 PCDHA1Q9Y5I3 950 aa19.04■□□□□ 0.64
SYNE3-202ENST00000553340 FAM187AA6NFU0 413 aa19.03■□□□□ 0.64
SYNE3-202ENST00000553340 SPDYE3A6NKU9 549 aa19.03■□□□□ 0.64
SYNE3-202ENST00000553340 F8W031 263 aaPredicted RBP19.03■□□□□ 0.64
SYNE3-202ENST00000553340 TBCAO75347 108 aaKnown RBP19.03■□□□□ 0.64
SYNE3-202ENST00000553340 SPATA31C1P0DKV0 1188 aa19.03■□□□□ 0.64
SYNE3-202ENST00000553340 PPATQ06203 517 aa19.03■□□□□ 0.64
SYNE3-202ENST00000553340 PLS1Q14651 629 aa19.03■□□□□ 0.64
SYNE3-202ENST00000553340 CLUL1Q15846 466 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms