RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 TECTAO75443 2155 aa7.83□□□□□ -1.16
PRPF40B-214ENST00000551320 CCDC69A6NI79 296 aa7.83□□□□□ -1.16
PRPF40B-214ENST00000551320 MBTPS2O43462 519 aa7.83□□□□□ -1.16
PRPF40B-214ENST00000551320 DCXO43602 365 aa7.83□□□□□ -1.16
PRPF40B-214ENST00000551320 EFCAB14O75071 495 aa7.83□□□□□ -1.16
PRPF40B-214ENST00000551320 CSDE1O75534 798 aaKnown RBP7.83□□□□□ -1.16
PRPF40B-214ENST00000551320 PARNO95453 639 aaKnown RBP7.83□□□□□ -1.16
PRPF40B-214ENST00000551320 CCNE2O96020 404 aa7.83□□□□□ -1.16
PRPF40B-214ENST00000551320 FGFR1P11362 822 aa7.83□□□□□ -1.16
PRPF40B-214ENST00000551320 FGFR4P22455 802 aa7.83□□□□□ -1.16
PRPF40B-214ENST00000551320 NRIP1P48552 1158 aa7.83□□□□□ -1.16
PRPF40B-214ENST00000551320 ACTR2P61160 394 aa7.83□□□□□ -1.16
PRPF40B-214ENST00000551320 NFX1Q12986 1120 aaKnown RBP7.83□□□□□ -1.16
PRPF40B-214ENST00000551320 MTMR1Q13613 665 aa7.83□□□□□ -1.16
PRPF40B-214ENST00000551320 SART3Q15020 963 aaKnown RBP7.83□□□□□ -1.16
PRPF40B-214ENST00000551320 PTPROQ16827 1216 aa7.83□□□□□ -1.16
PRPF40B-214ENST00000551320 ADCK5Q3MIX3 580 aa7.83□□□□□ -1.16
PRPF40B-214ENST00000551320 LONRF3Q496Y0 759 aa7.83□□□□□ -1.16
PRPF40B-214ENST00000551320 JAKMIP3Q5VZ66 844 aa7.83□□□□□ -1.16
PRPF40B-214ENST00000551320 CREB3L3Q68CJ9 461 aa7.83□□□□□ -1.16
PRPF40B-214ENST00000551320 KANK3Q6NY19 840 aa7.83□□□□□ -1.16
PRPF40B-214ENST00000551320 CASC1Q6TDU7 716 aa7.83□□□□□ -1.16
PRPF40B-214ENST00000551320 LYPD8Q6UX82 237 aa7.83□□□□□ -1.16
PRPF40B-214ENST00000551320 NLRX1Q86UT6 975 aa7.83□□□□□ -1.16
PRPF40B-214ENST00000551320 VN1R2Q8NFZ6 395 aa7.83□□□□□ -1.16
PRPF40B-214ENST00000551320 SPPL3Q8TCT6 385 aa7.83□□□□□ -1.16
PRPF40B-214ENST00000551320 SEPT1Q8WYJ6 367 aa7.83□□□□□ -1.16
PRPF40B-214ENST00000551320 ZNF689Q96CS4 500 aaPredicted RBP7.83□□□□□ -1.16
PRPF40B-214ENST00000551320 FBXL18Q96ME1 805 aa7.83□□□□□ -1.16
PRPF40B-214ENST00000551320 SPZ1Q9BXG8 430 aa7.83□□□□□ -1.16
PRPF40B-214ENST00000551320 RC3H2Q9HBD1 1191 aaKnown RBP7.83□□□□□ -1.16
PRPF40B-214ENST00000551320 KCNH7Q9NS40 1196 aa7.83□□□□□ -1.16
PRPF40B-214ENST00000551320 CLEC1BQ9P126 229 aa7.83□□□□□ -1.16
PRPF40B-214ENST00000551320 SEC63Q9UGP8 760 aaKnown RBP7.83□□□□□ -1.16
PRPF40B-214ENST00000551320 ZNF215Q9UL58 517 aaPredicted RBP7.83□□□□□ -1.16
PRPF40B-214ENST00000551320 NAP1L2Q9ULW6 460 aaPredicted RBP7.83□□□□□ -1.16
PRPF40B-214ENST00000551320 PADI3Q9ULW8 664 aa7.83□□□□□ -1.16
PRPF40B-214ENST00000551320 PLAGL2Q9UPG8 496 aa7.83□□□□□ -1.16
PRPF40B-214ENST00000551320 NOC2LQ9Y3T9 749 aaKnown RBP7.83□□□□□ -1.16
PRPF40B-214ENST00000551320 VPS13AQ96RL7 3174 aa7.83□□□□□ -1.16
PRPF40B-214ENST00000551320 KIAA1671Q9BY89 1806 aa7.82□□□□□ -1.16
PRPF40B-214ENST00000551320 NRCAMQ92823 1304 aa7.82□□□□□ -1.16
PRPF40B-214ENST00000551320 DGKIO75912 1065 aa7.82□□□□□ -1.16
PRPF40B-214ENST00000551320 DXOO77932 396 aaKnown RBP7.82□□□□□ -1.16
PRPF40B-214ENST00000551320 GLP2RO95838 553 aa7.82□□□□□ -1.16
PRPF40B-214ENST00000551320 VTNP04004 478 aa7.82□□□□□ -1.16
PRPF40B-214ENST00000551320 WEE2P0C1S8 567 aa7.82□□□□□ -1.16
PRPF40B-214ENST00000551320 GNAT1P11488 350 aa7.82□□□□□ -1.16
PRPF40B-214ENST00000551320 CDC27P30260 824 aa7.82□□□□□ -1.16
PRPF40B-214ENST00000551320 NDUFV1P49821 464 aa7.82□□□□□ -1.16
PRPF40B-214ENST00000551320 MMP16P51512 607 aa7.82□□□□□ -1.16
PRPF40B-214ENST00000551320 ERVFC1P60507 584 aa7.82□□□□□ -1.16
PRPF40B-214ENST00000551320 TIGD5Q53EQ6 642 aa7.82□□□□□ -1.16
PRPF40B-214ENST00000551320 LLGL2Q6P1M3 1020 aa7.82□□□□□ -1.16
PRPF40B-214ENST00000551320 TSHZ1Q6ZSZ6 1077 aa7.82□□□□□ -1.16
PRPF40B-214ENST00000551320 TMTC3Q6ZXV5 915 aa7.82□□□□□ -1.16
PRPF40B-214ENST00000551320 TICAM2Q86XR7 235 aa7.82□□□□□ -1.16
PRPF40B-214ENST00000551320 RNF135Q8IUD6 432 aa7.82□□□□□ -1.16
PRPF40B-214ENST00000551320 RASGRP4Q8TDF6 673 aa7.82□□□□□ -1.16
PRPF40B-214ENST00000551320 POF1BQ8WVV4 589 aa7.82□□□□□ -1.16
PRPF40B-214ENST00000551320 RUFY2Q8WXA3 655 aa7.82□□□□□ -1.16
PRPF40B-214ENST00000551320 SLC6A16Q9GZN6 736 aa7.82□□□□□ -1.16
PRPF40B-214ENST00000551320 SMOC2Q9H3U7 446 aa7.82□□□□□ -1.16
PRPF40B-214ENST00000551320 ANO2Q9NQ90 1003 aa7.82□□□□□ -1.16
PRPF40B-214ENST00000551320 JADE2Q9NQC1 790 aa7.82□□□□□ -1.16
PRPF40B-214ENST00000551320 FAM86C1Q9NVL1 165 aa7.82□□□□□ -1.16
PRPF40B-214ENST00000551320 MAP3K20Q9NYL2 800 aaKnown RBP7.82□□□□□ -1.16
PRPF40B-214ENST00000551320 ERAP1Q9NZ08 941 aa7.82□□□□□ -1.16
PRPF40B-214ENST00000551320 SLC9A2Q9UBY0 812 aa7.82□□□□□ -1.16
PRPF40B-214ENST00000551320 V9GY48 417 aaPredicted RBP7.82□□□□□ -1.16
PRPF40B-214ENST00000551320 TTC3P53804 2025 aa7.81□□□□□ -1.16
PRPF40B-214ENST00000551320 CNTNAP5Q8WYK1 1306 aa7.81□□□□□ -1.16
PRPF40B-214ENST00000551320 MBLAC1A4D2B0 266 aaPredicted RBP7.81□□□□□ -1.16
PRPF40B-214ENST00000551320 TMEM150BA6NC51 233 aa7.81□□□□□ -1.16
PRPF40B-214ENST00000551320 SPDYE3A6NKU9 549 aa7.81□□□□□ -1.16
PRPF40B-214ENST00000551320 TBKBP1A7MCY6 615 aa7.81□□□□□ -1.16
PRPF40B-214ENST00000551320 PRR33A8MZF0 331 aa7.81□□□□□ -1.16
PRPF40B-214ENST00000551320 ZBTB42B2RXF5 422 aa7.81□□□□□ -1.16
PRPF40B-214ENST00000551320 FAM86B1E9PN63 330 aa7.81□□□□□ -1.16
PRPF40B-214ENST00000551320 STXBP3O00186 592 aa7.81□□□□□ -1.16
PRPF40B-214ENST00000551320 PIK3CDO00329 1044 aa7.81□□□□□ -1.16
PRPF40B-214ENST00000551320 DDAH1O94760 285 aa7.81□□□□□ -1.16
PRPF40B-214ENST00000551320 PDGFBP01127 241 aaPredicted RBP7.81□□□□□ -1.16
PRPF40B-214ENST00000551320 FAM86B2P0C5J1 330 aa7.81□□□□□ -1.16
PRPF40B-214ENST00000551320 ATP4AP20648 1035 aa7.81□□□□□ -1.16
PRPF40B-214ENST00000551320 KLRC1P26715 233 aa7.81□□□□□ -1.16
PRPF40B-214ENST00000551320 KIF5BP33176 963 aa7.81□□□□□ -1.16
PRPF40B-214ENST00000551320 MCM5P33992 734 aa7.81□□□□□ -1.16
PRPF40B-214ENST00000551320 MRE11P49959 708 aa7.81□□□□□ -1.16
PRPF40B-214ENST00000551320 NAPAP54920 295 aa7.81□□□□□ -1.16
PRPF40B-214ENST00000551320 NHLH1Q02575 133 aa7.81□□□□□ -1.16
PRPF40B-214ENST00000551320 ADAM15Q13444 863 aa7.81□□□□□ -1.16
PRPF40B-214ENST00000551320 COL19A1Q14993 1142 aa7.81□□□□□ -1.16
PRPF40B-214ENST00000551320 PTPRNQ16849 979 aa7.81□□□□□ -1.16
PRPF40B-214ENST00000551320 KIZQ2M2Z5 673 aa7.81□□□□□ -1.16
PRPF40B-214ENST00000551320 CTC1Q2NKJ3 1217 aa7.81□□□□□ -1.16
PRPF40B-214ENST00000551320 SPOUT1Q5T280 376 aaKnown RBP7.81□□□□□ -1.16
PRPF40B-214ENST00000551320 SWSAP1Q6NVH7 229 aa7.81□□□□□ -1.16
PRPF40B-214ENST00000551320 MTHFD1LQ6UB35 978 aa7.81□□□□□ -1.16
PRPF40B-214ENST00000551320 CCDC60Q8IWA6 550 aaPredicted RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms