RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 CNGA4Q8IV77 575 aa21.68■■□□□ 1.06
SSH1-209ENST00000551165 PCMTD1Q96MG8 357 aaPredicted RBP21.68■■□□□ 1.06
SSH1-209ENST00000551165 SEPT9Q9UHD8 586 aaPredicted RBP21.68■■□□□ 1.06
SSH1-209ENST00000551165 K7ENM7 598 aa21.68■■□□□ 1.06
SSH1-209ENST00000551165 CALUO43852 315 aaPredicted RBP21.68■■□□□ 1.06
SSH1-209ENST00000551165 PLS3P13797 630 aa21.68■■□□□ 1.06
SSH1-209ENST00000551165 COPB2P35606 906 aa21.68■■□□□ 1.06
SSH1-209ENST00000551165 PEX3P56589 373 aa21.68■■□□□ 1.06
SSH1-209ENST00000551165 PCYT2Q99447 389 aa21.68■■□□□ 1.06
SSH1-209ENST00000551165 KCND1Q9NSA2 647 aa21.68■■□□□ 1.06
SSH1-209ENST00000551165 IGSF9BQ9UPX0 1349 aa21.68■■□□□ 1.06
SSH1-209ENST00000551165 GGPS1O95749 300 aa21.67■■□□□ 1.06
SSH1-209ENST00000551165 KCNJ6P48051 423 aa21.67■■□□□ 1.06
SSH1-209ENST00000551165 MARSP56192 900 aaKnown RBP21.67■■□□□ 1.06
SSH1-209ENST00000551165 ANKRD23Q86SG2 305 aa21.67■■□□□ 1.06
SSH1-209ENST00000551165 BSNDQ8WZ55 320 aa21.67■■□□□ 1.06
SSH1-209ENST00000551165 KIFC3Q9BVG8 833 aa21.67■■□□□ 1.06
SSH1-209ENST00000551165 PDGFCQ9NRA1 345 aa21.67■■□□□ 1.06
SSH1-209ENST00000551165 LARSQ9P2J5 1176 aaKnown RBP21.67■■□□□ 1.06
SSH1-209ENST00000551165 CAPN11Q9UMQ6 739 aa21.67■■□□□ 1.06
SSH1-209ENST00000551165 ECM2O94769 699 aaPredicted RBP21.67■■□□□ 1.06
SSH1-209ENST00000551165 HUNKP57058 714 aa21.67■■□□□ 1.06
SSH1-209ENST00000551165 APBA1Q02410 837 aa21.67■■□□□ 1.06
SSH1-209ENST00000551165 KCNMA1Q12791 1236 aa21.67■■□□□ 1.06
SSH1-209ENST00000551165 SHCBP1Q8NEM2 672 aa21.67■■□□□ 1.06
SSH1-209ENST00000551165 FAM207AQ9NSI2 230 aaPredicted RBP21.67■■□□□ 1.06
SSH1-209ENST00000551165 SLC16A4O15374 487 aa21.66■■□□□ 1.06
SSH1-209ENST00000551165 TPM1P09493 284 aa21.66■■□□□ 1.06
SSH1-209ENST00000551165 TRIM21P19474 475 aaKnown RBP21.66■■□□□ 1.06
SSH1-209ENST00000551165 TRIM14Q14142 442 aa21.66■■□□□ 1.06
SSH1-209ENST00000551165 NYAP1Q6ZVC0 841 aa21.66■■□□□ 1.06
SSH1-209ENST00000551165 COPS5Q92905 334 aa21.66■■□□□ 1.06
SSH1-209ENST00000551165 CHP1Q99653 195 aa21.66■■□□□ 1.06
SSH1-209ENST00000551165 XPNPEP1Q9NQW7 623 aa21.66■■□□□ 1.06
SSH1-209ENST00000551165 ZNF302Q9NR11 478 aa21.66■■□□□ 1.06
SSH1-209ENST00000551165 DDX41Q9UJV9 622 aaKnown RBP21.66■■□□□ 1.06
SSH1-209ENST00000551165 SLC45A1Q9Y2W3 748 aa21.66■■□□□ 1.06
SSH1-209ENST00000551165 MAFBQ9Y5Q3 323 aaPredicted RBP21.66■■□□□ 1.06
SSH1-209ENST00000551165 ARID2Q68CP9 1835 aa21.66■■□□□ 1.06
SSH1-209ENST00000551165 MYH9P35579 1960 aaKnown RBP21.66■■□□□ 1.06
SSH1-209ENST00000551165 MTERF2Q49AM1 385 aa21.66■■□□□ 1.06
SSH1-209ENST00000551165 OTUD6AQ7L8S5 288 aa21.66■■□□□ 1.06
SSH1-209ENST00000551165 CRACR2AQ9BSW2 395 aa21.66■■□□□ 1.06
SSH1-209ENST00000551165 CYP26B1Q9NR63 512 aa21.66■■□□□ 1.06
SSH1-209ENST00000551165 AGPAT3Q9NRZ7 376 aa21.66■■□□□ 1.06
SSH1-209ENST00000551165 LUC7L2Q9Y383 392 aaKnown RBP21.66■■□□□ 1.06
SSH1-209ENST00000551165 PCDHB13Q9Y5F0 798 aa21.66■■□□□ 1.06
SSH1-209ENST00000551165 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.66■■□□□ 1.06
SSH1-209ENST00000551165 A0A0U1RQJ8 604 aa21.65■■□□□ 1.06
SSH1-209ENST00000551165 GNA14O95837 355 aa21.65■■□□□ 1.06
SSH1-209ENST00000551165 TNNT1P13805 278 aa21.65■■□□□ 1.06
SSH1-209ENST00000551165 GPIHBP1Q8IV16 184 aa21.65■■□□□ 1.06
SSH1-209ENST00000551165 REXO1L1PQ8IX06 675 aa21.65■■□□□ 1.06
SSH1-209ENST00000551165 ATRIPQ8WXE1 791 aa21.65■■□□□ 1.06
SSH1-209ENST00000551165 MMRN2Q9H8L6 949 aa21.65■■□□□ 1.06
SSH1-209ENST00000551165 PDLIM7Q9NR12 457 aa21.65■■□□□ 1.06
SSH1-209ENST00000551165 IGKV6D-21A0A0A0MT36 114 aa21.65■■□□□ 1.06
SSH1-209ENST00000551165 ZBTB48P10074 688 aaPredicted RBP21.65■■□□□ 1.06
SSH1-209ENST00000551165 FECHP22830 423 aa21.65■■□□□ 1.06
SSH1-209ENST00000551165 ADORA2AP29274 412 aa21.65■■□□□ 1.06
SSH1-209ENST00000551165 HSDL1Q3SXM5 330 aa21.65■■□□□ 1.06
SSH1-209ENST00000551165 WDR59Q6PJI9 974 aa21.65■■□□□ 1.06
SSH1-209ENST00000551165 DRC1Q96MC2 740 aa21.65■■□□□ 1.06
SSH1-209ENST00000551165 PPP2R2CQ9Y2T4 447 aa21.65■■□□□ 1.06
SSH1-209ENST00000551165 HAUS6Q7Z4H7 955 aa21.64■■□□□ 1.05
SSH1-209ENST00000551165 CCDC51Q96ER9 411 aa21.64■■□□□ 1.05
SSH1-209ENST00000551165 GBP3Q9H0R5 595 aa21.64■■□□□ 1.05
SSH1-209ENST00000551165 CYP2J2P51589 502 aa21.63■■□□□ 1.05
SSH1-209ENST00000551165 KCNH2Q12809 1159 aa21.63■■□□□ 1.05
SSH1-209ENST00000551165 NEDD9Q14511 834 aa21.63■■□□□ 1.05
SSH1-209ENST00000551165 XKR3Q5GH77 459 aa21.63■■□□□ 1.05
SSH1-209ENST00000551165 SYCP3Q8IZU3 236 aa21.63■■□□□ 1.05
SSH1-209ENST00000551165 DNAJC7Q99615 494 aa21.63■■□□□ 1.05
SSH1-209ENST00000551165 MLXIPQ9HAP2 919 aa21.63■■□□□ 1.05
SSH1-209ENST00000551165 ARMCX3Q9UH62 379 aaPredicted RBP21.63■■□□□ 1.05
SSH1-209ENST00000551165 TGFB3P10600 412 aa21.63■■□□□ 1.05
SSH1-209ENST00000551165 NPTX2P47972 431 aa21.63■■□□□ 1.05
SSH1-209ENST00000551165 METTL7BQ6UX53 244 aa21.63■■□□□ 1.05
SSH1-209ENST00000551165 FRMD5Q7Z6J6 570 aa21.63■■□□□ 1.05
SSH1-209ENST00000551165 OR8K1Q8NGG5 319 aa21.63■■□□□ 1.05
SSH1-209ENST00000551165 BORCS6Q96GS4 357 aa21.63■■□□□ 1.05
SSH1-209ENST00000551165 MORF4L1Q9UBU8 362 aa21.63■■□□□ 1.05
SSH1-209ENST00000551165 UBE4BO95155 1302 aa21.62■■□□□ 1.05
SSH1-209ENST00000551165 CCDC169A6NNP5 214 aa21.62■■□□□ 1.05
SSH1-209ENST00000551165 OATP04181 439 aa21.62■■□□□ 1.05
SSH1-209ENST00000551165 TCF7P36402 384 aaPredicted RBP21.62■■□□□ 1.05
SSH1-209ENST00000551165 PTPN14Q15678 1187 aa21.62■■□□□ 1.05
SSH1-209ENST00000551165 ZNF792Q3KQV3 632 aa21.62■■□□□ 1.05
SSH1-209ENST00000551165 GJC2Q5T442 439 aaPredicted RBP21.62■■□□□ 1.05
SSH1-209ENST00000551165 CHADLQ6NUI6 762 aa21.62■■□□□ 1.05
SSH1-209ENST00000551165 CCDC62Q6P9F0 684 aa21.62■■□□□ 1.05
SSH1-209ENST00000551165 TRIM50Q86XT4 487 aa21.62■■□□□ 1.05
SSH1-209ENST00000551165 ZSWIM2Q8NEG5 633 aa21.62■■□□□ 1.05
SSH1-209ENST00000551165 MORC4Q8TE76 937 aa21.62■■□□□ 1.05
SSH1-209ENST00000551165 GTF3C2Q8WUA4 911 aaPredicted RBP21.62■■□□□ 1.05
SSH1-209ENST00000551165 DMAC2Q9NW81 257 aa21.62■■□□□ 1.05
SSH1-209ENST00000551165 PLXNB2O15031 1838 aa21.62■■□□□ 1.05
SSH1-209ENST00000551165 DKC1O60832 514 aaKnown RBP eCLIP21.62■■□□□ 1.05
SSH1-209ENST00000551165 RPL13P26373 211 aaKnown RBP21.62■■□□□ 1.05
SSH1-209ENST00000551165 NCKAP1LP55160 1127 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms