RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 ERVFC1P60507 584 aa13.1□□□□□ -0.31
PRPF40B-212ENST00000551111 FAM189BP81408 668 aa13.1□□□□□ -0.31
PRPF40B-212ENST00000551111 MAPK8IP2Q13387 824 aaPredicted RBP13.1□□□□□ -0.31
PRPF40B-212ENST00000551111 BLOC1S2Q6QNY1 142 aa13.1□□□□□ -0.31
PRPF40B-212ENST00000551111 LRRC55Q6ZSA7 311 aa13.1□□□□□ -0.31
PRPF40B-212ENST00000551111 REXO1Q8N1G1 1221 aaKnown RBP13.1□□□□□ -0.31
PRPF40B-212ENST00000551111 LINC01465Q8N7H1 131 aa13.1□□□□□ -0.31
PRPF40B-212ENST00000551111 TNPO1Q92973 898 aaKnown RBP13.1□□□□□ -0.31
PRPF40B-212ENST00000551111 SLC26A6Q9BXS9 759 aa13.1□□□□□ -0.31
PRPF40B-212ENST00000551111 GLT8D2Q9H1C3 349 aa13.1□□□□□ -0.31
PRPF40B-212ENST00000551111 CWH43Q9H720 699 aa13.1□□□□□ -0.31
PRPF40B-212ENST00000551111 C6orf50Q9HD87 102 aa13.1□□□□□ -0.31
PRPF40B-212ENST00000551111 TYW1Q9NV66 732 aaKnown RBP13.1□□□□□ -0.31
PRPF40B-212ENST00000551111 MUTYHQ9UIF7 546 aa13.1□□□□□ -0.31
PRPF40B-212ENST00000551111 CD207Q9UJ71 328 aa13.1□□□□□ -0.31
PRPF40B-212ENST00000551111 BARX2Q9UMQ3 279 aaPredicted RBP13.1□□□□□ -0.31
PRPF40B-212ENST00000551111 DENND3A2RUS2 1198 aa13.09□□□□□ -0.31
PRPF40B-212ENST00000551111 TMEM150BA6NC51 233 aa13.09□□□□□ -0.31
PRPF40B-212ENST00000551111 PRR33A8MZF0 331 aa13.09□□□□□ -0.31
PRPF40B-212ENST00000551111 MSH4O15457 936 aa13.09□□□□□ -0.31
PRPF40B-212ENST00000551111 DCXO43602 365 aa13.09□□□□□ -0.31
PRPF40B-212ENST00000551111 CSDE1O75534 798 aaKnown RBP13.09□□□□□ -0.31
PRPF40B-212ENST00000551111 HMGB1P09429 215 aaKnown RBP13.09□□□□□ -0.31
PRPF40B-212ENST00000551111 FGFR4P22455 802 aa13.09□□□□□ -0.31
PRPF40B-212ENST00000551111 PDIA3P30101 505 aaKnown RBP13.09□□□□□ -0.31
PRPF40B-212ENST00000551111 HOXD11P31277 338 aaPredicted RBP13.09□□□□□ -0.31
PRPF40B-212ENST00000551111 CIITAP33076 1130 aa13.09□□□□□ -0.31
PRPF40B-212ENST00000551111 PBX3P40426 434 aa13.09□□□□□ -0.31
PRPF40B-212ENST00000551111 NDUFV1P49821 464 aa13.09□□□□□ -0.31
PRPF40B-212ENST00000551111 CRYBB1P53674 252 aaPredicted RBP13.09□□□□□ -0.31
PRPF40B-212ENST00000551111 NLRP11P59045 1033 aaKnown RBP13.09□□□□□ -0.31
PRPF40B-212ENST00000551111 DRP2Q13474 957 aa13.09□□□□□ -0.31
PRPF40B-212ENST00000551111 SMAD4Q13485 552 aaKnown RBP13.09□□□□□ -0.31
PRPF40B-212ENST00000551111 TOB2Q14106 344 aaPredicted RBP13.09□□□□□ -0.31
PRPF40B-212ENST00000551111 ZNF746Q6NUN9 644 aaPredicted RBP13.09□□□□□ -0.31
PRPF40B-212ENST00000551111 SLC24A5Q71RS6 500 aa13.09□□□□□ -0.31
PRPF40B-212ENST00000551111 TEX2Q8IWB9 1127 aa13.09□□□□□ -0.31
PRPF40B-212ENST00000551111 BBXQ8WY36 941 aaPredicted RBP13.09□□□□□ -0.31
PRPF40B-212ENST00000551111 ADAMTS10Q9H324 1103 aa13.09□□□□□ -0.31
PRPF40B-212ENST00000551111 TBC1D22BQ9NU19 505 aa13.09□□□□□ -0.31
PRPF40B-212ENST00000551111 PRKAG3Q9UGI9 489 aa13.09□□□□□ -0.31
PRPF40B-212ENST00000551111 HCN4Q9Y3Q4 1203 aa13.09□□□□□ -0.31
PRPF40B-212ENST00000551111 PCDHA10Q9Y5I2 948 aa13.09□□□□□ -0.31
PRPF40B-212ENST00000551111 CCDC196A0A1B0GTZ2 297 aa13.08□□□□□ -0.32
PRPF40B-212ENST00000551111 CHMP2AO43633 222 aa13.08□□□□□ -0.32
PRPF40B-212ENST00000551111 NCK2O43639 380 aa13.08□□□□□ -0.32
PRPF40B-212ENST00000551111 FGF18O76093 207 aa13.08□□□□□ -0.32
PRPF40B-212ENST00000551111 EYA4O95677 639 aa13.08□□□□□ -0.32
PRPF40B-212ENST00000551111 PSAPP07602 524 aa13.08□□□□□ -0.32
PRPF40B-212ENST00000551111 ALADP13716 330 aa13.08□□□□□ -0.32
PRPF40B-212ENST00000551111 NAALADL2Q58DX5 795 aa13.08□□□□□ -0.32
PRPF40B-212ENST00000551111 SPOUT1Q5T280 376 aaKnown RBP13.08□□□□□ -0.32
PRPF40B-212ENST00000551111 EFCAB12Q6NXP0 572 aa13.08□□□□□ -0.32
PRPF40B-212ENST00000551111 RNF135Q8IUD6 432 aa13.08□□□□□ -0.32
PRPF40B-212ENST00000551111 FBXL16Q8N461 479 aa13.08□□□□□ -0.32
PRPF40B-212ENST00000551111 EFHBQ8N7U6 833 aa13.08□□□□□ -0.32
PRPF40B-212ENST00000551111 COLGALT1Q8NBJ5 622 aa13.08□□□□□ -0.32
PRPF40B-212ENST00000551111 AIFM3Q96NN9 605 aa13.08□□□□□ -0.32
PRPF40B-212ENST00000551111 CASD1Q96PB1 797 aa13.08□□□□□ -0.32
PRPF40B-212ENST00000551111 SH2D3AQ9BRG2 576 aa13.08□□□□□ -0.32
PRPF40B-212ENST00000551111 UNC45AQ9H3U1 944 aa13.08□□□□□ -0.32
PRPF40B-212ENST00000551111 ZDBF2Q9HCK1 2354 aa13.07□□□□□ -0.32
PRPF40B-212ENST00000551111 GPR182O15218 404 aa13.07□□□□□ -0.32
PRPF40B-212ENST00000551111 STBD1O95210 358 aa13.07□□□□□ -0.32
PRPF40B-212ENST00000551111 IFNAR1P17181 557 aa13.07□□□□□ -0.32
PRPF40B-212ENST00000551111 SETQ01105 290 aaPredicted RBP13.07□□□□□ -0.32
PRPF40B-212ENST00000551111 NPY5RQ15761 445 aa13.07□□□□□ -0.32
PRPF40B-212ENST00000551111 HFE2Q6ZVN8 426 aa13.07□□□□□ -0.32
PRPF40B-212ENST00000551111 SMAP1Q8IYB5 467 aaPredicted RBP13.07□□□□□ -0.32
PRPF40B-212ENST00000551111 SMRP1Q8NCR6 262 aa13.07□□□□□ -0.32
PRPF40B-212ENST00000551111 CCDC136Q96JN2 1154 aa13.07□□□□□ -0.32
PRPF40B-212ENST00000551111 CEP89Q96ST8 783 aa13.07□□□□□ -0.32
PRPF40B-212ENST00000551111 RNF26Q9BY78 433 aaPredicted RBP13.07□□□□□ -0.32
PRPF40B-212ENST00000551111 DISC1Q9NRI5 854 aa13.07□□□□□ -0.32
PRPF40B-212ENST00000551111 CDH22Q9UJ99 828 aa13.07□□□□□ -0.32
PRPF40B-212ENST00000551111 AKT3Q9Y243 479 aa13.07□□□□□ -0.32
PRPF40B-212ENST00000551111 SAMM50Q9Y512 469 aa13.07□□□□□ -0.32
PRPF40B-212ENST00000551111 ARID2Q68CP9 1835 aa13.06□□□□□ -0.32
PRPF40B-212ENST00000551111 PIEZO1Q92508 2521 aa13.06□□□□□ -0.32
PRPF40B-212ENST00000551111 KMT2EQ8IZD2 1858 aa13.06□□□□□ -0.32
PRPF40B-212ENST00000551111 TDP2O95551 362 aa13.06□□□□□ -0.32
PRPF40B-212ENST00000551111 OATP04181 439 aa13.06□□□□□ -0.32
PRPF40B-212ENST00000551111 GNA11P29992 359 aa13.06□□□□□ -0.32
PRPF40B-212ENST00000551111 EVCP57679 992 aa13.06□□□□□ -0.32
PRPF40B-212ENST00000551111 PRKCEQ02156 737 aa13.06□□□□□ -0.32
PRPF40B-212ENST00000551111 CLLU1OSQ5K130 101 aa13.06□□□□□ -0.32
PRPF40B-212ENST00000551111 MICAL1Q8TDZ2 1067 aa13.06□□□□□ -0.32
PRPF40B-212ENST00000551111 TBCKQ8TEA7 893 aa13.06□□□□□ -0.32
PRPF40B-212ENST00000551111 SLC5A5Q92911 643 aa13.06□□□□□ -0.32
PRPF40B-212ENST00000551111 TLE6Q9H808 572 aa13.06□□□□□ -0.32
PRPF40B-212ENST00000551111 ATP6V0A4Q9HBG4 840 aa13.06□□□□□ -0.32
PRPF40B-212ENST00000551111 C1orf112Q9NSG2 853 aa13.06□□□□□ -0.32
PRPF40B-212ENST00000551111 TMEM161AQ9NX61 479 aa13.06□□□□□ -0.32
PRPF40B-212ENST00000551111 FAM50BQ9Y247 325 aa13.06□□□□□ -0.32
PRPF40B-212ENST00000551111 USP15Q9Y4E8 981 aaPredicted RBP13.06□□□□□ -0.32
PRPF40B-212ENST00000551111 ARIH1Q9Y4X5 557 aaPredicted RBP13.06□□□□□ -0.32
PRPF40B-212ENST00000551111 PCDHB12Q9Y5F1 795 aa13.06□□□□□ -0.32
PRPF40B-212ENST00000551111 HIDE1A8MVS5 230 aa13.05□□□□□ -0.32
PRPF40B-212ENST00000551111 WDR64B1ANS9 1081 aa13.05□□□□□ -0.32
PRPF40B-212ENST00000551111 M0R2N6 131 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms