RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 HTATSF1O43719 755 aaKnown RBP2.85□□□□□ -1.95
TRAV1-1-201ENST00000542354 ADAM11O75078 769 aa2.85□□□□□ -1.95
TRAV1-1-201ENST00000542354 GJB5O95377 273 aa2.85□□□□□ -1.95
TRAV1-1-201ENST00000542354 TIAF1O95411 115 aa2.85□□□□□ -1.95
TRAV1-1-201ENST00000542354 IGHA2P01877 340 aa2.85□□□□□ -1.95
TRAV1-1-201ENST00000542354 CEACAM1P13688 526 aa2.85□□□□□ -1.95
TRAV1-1-201ENST00000542354 KLRK1P26718 216 aa2.85□□□□□ -1.95
TRAV1-1-201ENST00000542354 FKBP1AP62942 108 aaKnown RBP2.85□□□□□ -1.95
TRAV1-1-201ENST00000542354 ERVK-24P63145 666 aa2.85□□□□□ -1.95
TRAV1-1-201ENST00000542354 CSTF1Q05048 431 aaKnown RBP2.85□□□□□ -1.95
TRAV1-1-201ENST00000542354 SOX4Q06945 474 aaPredicted RBP2.85□□□□□ -1.95
TRAV1-1-201ENST00000542354 SCAPQ12770 1279 aa2.85□□□□□ -1.95
TRAV1-1-201ENST00000542354 FKBP5Q13451 457 aaPredicted RBP2.85□□□□□ -1.95
TRAV1-1-201ENST00000542354 PRAMEF19Q5SWL8 479 aa2.85□□□□□ -1.95
TRAV1-1-201ENST00000542354 WDR78Q5VTH9 848 aa2.85□□□□□ -1.95
TRAV1-1-201ENST00000542354 FKBP1CQ5VVH2 108 aa2.85□□□□□ -1.95
TRAV1-1-201ENST00000542354 SULT6B1Q6IMI4 303 aa2.85□□□□□ -1.95
TRAV1-1-201ENST00000542354 TTLL7Q6ZT98 887 aa2.85□□□□□ -1.95
TRAV1-1-201ENST00000542354 SCYL3Q8IZE3 742 aa2.85□□□□□ -1.95
TRAV1-1-201ENST00000542354 CERS5Q8N5B7 392 aa2.85□□□□□ -1.95
TRAV1-1-201ENST00000542354 CELF5Q8N6W0 485 aaKnown RBP2.85□□□□□ -1.95
TRAV1-1-201ENST00000542354 SHCBP1Q8NEM2 672 aa2.85□□□□□ -1.95
TRAV1-1-201ENST00000542354 NPLOC4Q8TAT6 608 aa2.85□□□□□ -1.95
TRAV1-1-201ENST00000542354 GPR152Q8TDT2 470 aa2.85□□□□□ -1.95
TRAV1-1-201ENST00000542354 SUSD6Q92537 303 aa2.85□□□□□ -1.95
TRAV1-1-201ENST00000542354 FAM84AQ96KN4 292 aa2.85□□□□□ -1.95
TRAV1-1-201ENST00000542354 ARID3AQ99856 593 aa2.85□□□□□ -1.95
TRAV1-1-201ENST00000542354 SEZ6LQ9BYH1 1024 aa2.85□□□□□ -1.95
TRAV1-1-201ENST00000542354 ZMYND15Q9H091 742 aa2.85□□□□□ -1.95
TRAV1-1-201ENST00000542354 LMAN2LQ9H0V9 348 aa2.85□□□□□ -1.95
TRAV1-1-201ENST00000542354 LRRC4CQ9HCJ2 640 aa2.85□□□□□ -1.95
TRAV1-1-201ENST00000542354 SLC5A4Q9NY91 659 aa2.85□□□□□ -1.95
TRAV1-1-201ENST00000542354 CLEC1BQ9P126 229 aa2.85□□□□□ -1.95
TRAV1-1-201ENST00000542354 RBPJLQ9UBG7 517 aa2.85□□□□□ -1.95
TRAV1-1-201ENST00000542354 NRBP1Q9UHY1 535 aa2.85□□□□□ -1.95
TRAV1-1-201ENST00000542354 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP2.85□□□□□ -1.95
TRAV1-1-201ENST00000542354 CENPEQ02224 2701 aa2.85□□□□□ -1.95
TRAV1-1-201ENST00000542354 LRBAP50851 2863 aa2.85□□□□□ -1.95
TRAV1-1-201ENST00000542354 STAB1Q9NY15 2570 aa2.85□□□□□ -1.95
TRAV1-1-201ENST00000542354 SPTBN1Q01082 2364 aaKnown RBP2.85□□□□□ -1.95
TRAV1-1-201ENST00000542354 NUP98P52948 1817 aa2.84□□□□□ -1.95
TRAV1-1-201ENST00000542354 BLACEA4D250 179 aa2.84□□□□□ -1.95
TRAV1-1-201ENST00000542354 IRS4O14654 1257 aaPredicted RBP2.84□□□□□ -1.95
TRAV1-1-201ENST00000542354 DDX3YO15523 660 aaKnown RBP2.84□□□□□ -1.95
TRAV1-1-201ENST00000542354 PRMT3O60678 531 aa2.84□□□□□ -1.95
TRAV1-1-201ENST00000542354 ADAMTS4O75173 837 aa2.84□□□□□ -1.95
TRAV1-1-201ENST00000542354 DCNP07585 359 aaKnown RBP2.84□□□□□ -1.95
TRAV1-1-201ENST00000542354 CR2P20023 1033 aa2.84□□□□□ -1.95
TRAV1-1-201ENST00000542354 SP100P23497 879 aaPredicted RBP2.84□□□□□ -1.95
TRAV1-1-201ENST00000542354 GTF2F1P35269 517 aaKnown RBP eCLIP2.84□□□□□ -1.95
TRAV1-1-201ENST00000542354 ZNF76P36508 570 aa2.84□□□□□ -1.95
TRAV1-1-201ENST00000542354 HERVK_113P62684 666 aa2.84□□□□□ -1.95
TRAV1-1-201ENST00000542354 GSTM4Q03013 218 aa2.84□□□□□ -1.95
TRAV1-1-201ENST00000542354 LPAL2Q16609 132 aa2.84□□□□□ -1.95
TRAV1-1-201ENST00000542354 HSP90AB3PQ58FF7 597 aa2.84□□□□□ -1.95
TRAV1-1-201ENST00000542354 NLRP10Q86W26 655 aa2.84□□□□□ -1.95
TRAV1-1-201ENST00000542354 AEBP1Q8IUX7 1158 aa2.84□□□□□ -1.95
TRAV1-1-201ENST00000542354 EFHBQ8N7U6 833 aa2.84□□□□□ -1.95
TRAV1-1-201ENST00000542354 KLHDC9Q8NEP7 349 aa2.84□□□□□ -1.95
TRAV1-1-201ENST00000542354 SNX29Q8TEQ0 813 aa2.84□□□□□ -1.95
TRAV1-1-201ENST00000542354 FBLIM1Q8WUP2 373 aa2.84□□□□□ -1.95
TRAV1-1-201ENST00000542354 FAM168AQ92567 244 aa2.84□□□□□ -1.95
TRAV1-1-201ENST00000542354 CCDC120Q96HB5 630 aa2.84□□□□□ -1.95
TRAV1-1-201ENST00000542354 CORO1BQ9BR76 489 aa2.84□□□□□ -1.95
TRAV1-1-201ENST00000542354 FAM126AQ9BYI3 521 aaPredicted RBP2.84□□□□□ -1.95
TRAV1-1-201ENST00000542354 FZD8Q9H461 694 aa2.84□□□□□ -1.95
TRAV1-1-201ENST00000542354 MKNK2Q9HBH9 465 aa2.84□□□□□ -1.95
TRAV1-1-201ENST00000542354 SPC25Q9HBM1 224 aa2.84□□□□□ -1.95
TRAV1-1-201ENST00000542354 TXNRD2Q9NNW7 524 aa2.84□□□□□ -1.95
TRAV1-1-201ENST00000542354 DZANK1Q9NVP4 752 aa2.84□□□□□ -1.95
TRAV1-1-201ENST00000542354 SPATA6Q9NWH7 488 aaPredicted RBP2.84□□□□□ -1.95
TRAV1-1-201ENST00000542354 POLKQ9UBT6 870 aa2.84□□□□□ -1.95
TRAV1-1-201ENST00000542354 SEPT3Q9UH03 358 aa2.84□□□□□ -1.95
TRAV1-1-201ENST00000542354 SALL4Q9UJQ4 1053 aa2.84□□□□□ -1.95
TRAV1-1-201ENST00000542354 KLK13Q9UKR3 277 aa2.84□□□□□ -1.95
TRAV1-1-201ENST00000542354 SOX13Q9UN79 622 aa2.84□□□□□ -1.95
TRAV1-1-201ENST00000542354 RRP7AQ9Y3A4 280 aaKnown RBP2.84□□□□□ -1.95
TRAV1-1-201ENST00000542354 COL4A1P02462 1669 aa2.84□□□□□ -1.95
TRAV1-1-201ENST00000542354 FRMPD4Q14CM0 1322 aa2.84□□□□□ -1.96
TRAV1-1-201ENST00000542354 ANKHD1Q8IWZ3 2542 aaKnown RBP2.84□□□□□ -1.96
TRAV1-1-201ENST00000542354 CDK5RAP2Q96SN8 1893 aa2.84□□□□□ -1.96
TRAV1-1-201ENST00000542354 RALGAPA1Q6GYQ0 2036 aa2.83□□□□□ -1.96
TRAV1-1-201ENST00000542354 A0A087WV48 116 aa2.83□□□□□ -1.96
TRAV1-1-201ENST00000542354 LOC100289279A0A1B0GTE1 492 aa2.83□□□□□ -1.96
TRAV1-1-201ENST00000542354 H0Y626 953 aa2.83□□□□□ -1.96
TRAV1-1-201ENST00000542354 KCNQ3O43525 872 aa2.83□□□□□ -1.96
TRAV1-1-201ENST00000542354 STRNO43815 780 aa2.83□□□□□ -1.96
TRAV1-1-201ENST00000542354 PEX10O60683 326 aa2.83□□□□□ -1.96
TRAV1-1-201ENST00000542354 PHACTR2O75167 634 aa2.83□□□□□ -1.96
TRAV1-1-201ENST00000542354 TRIM16O95361 564 aa2.83□□□□□ -1.96
TRAV1-1-201ENST00000542354 RB1P06400 928 aa2.83□□□□□ -1.96
TRAV1-1-201ENST00000542354 ASGR1P07306 291 aa2.83□□□□□ -1.96
TRAV1-1-201ENST00000542354 ASGR2P07307 311 aa2.83□□□□□ -1.96
TRAV1-1-201ENST00000542354 SUPT20HL2P0C7V6 817 aa2.83□□□□□ -1.96
TRAV1-1-201ENST00000542354 ADH5P11766 374 aa2.83□□□□□ -1.96
TRAV1-1-201ENST00000542354 AKR1A1P14550 325 aa2.83□□□□□ -1.96
TRAV1-1-201ENST00000542354 RAB6AP20340 208 aa2.83□□□□□ -1.96
TRAV1-1-201ENST00000542354 MZF1P28698 734 aaPredicted RBP2.83□□□□□ -1.96
TRAV1-1-201ENST00000542354 TNFRSF8P28908 595 aa2.83□□□□□ -1.96
TRAV1-1-201ENST00000542354 HOXA7P31268 230 aaPredicted RBP2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms