RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 GNA14O95837 355 aa16.14■□□□□ 0.17
DDX55-209ENST00000542286 TUBBP07437 444 aa16.14■□□□□ 0.17
DDX55-209ENST00000542286 GGCXP38435 758 aa16.14■□□□□ 0.17
DDX55-209ENST00000542286 EPHA7Q15375 998 aa16.14■□□□□ 0.17
DDX55-209ENST00000542286 CBWD6Q4V339 395 aa16.14■□□□□ 0.17
DDX55-209ENST00000542286 CBWD3Q5JTY5 395 aa16.14■□□□□ 0.17
DDX55-209ENST00000542286 CBWD5Q5RIA9 395 aa16.14■□□□□ 0.17
DDX55-209ENST00000542286 CCDC91Q7Z6B0 441 aa16.14■□□□□ 0.17
DDX55-209ENST00000542286 LXNQ9BS40 222 aa16.14■□□□□ 0.17
DDX55-209ENST00000542286 VCPKMTQ9H867 229 aa16.14■□□□□ 0.17
DDX55-209ENST00000542286 GOPCQ9HD26 462 aa16.14■□□□□ 0.17
DDX55-209ENST00000542286 GRID2IPA4D2P6 1211 aa16.14■□□□□ 0.17
DDX55-209ENST00000542286 ODR4Q5SWX8 454 aa16.14■□□□□ 0.17
DDX55-209ENST00000542286 PRAMEF18Q5VWM3 479 aa16.14■□□□□ 0.17
DDX55-209ENST00000542286 IQCEQ6IPM2 695 aa16.14■□□□□ 0.17
DDX55-209ENST00000542286 ZC3H3Q8IXZ2 948 aaKnown RBP16.14■□□□□ 0.17
DDX55-209ENST00000542286 GMLQ99445 158 aa16.14■□□□□ 0.17
DDX55-209ENST00000542286 RABEP2Q9H5N1 569 aa16.14■□□□□ 0.17
DDX55-209ENST00000542286 TYW1Q9NV66 732 aaKnown RBP16.14■□□□□ 0.17
DDX55-209ENST00000542286 HERC5Q9UII4 1024 aaKnown RBP16.14■□□□□ 0.17
DDX55-209ENST00000542286 ZC3H4Q9UPT8 1303 aaKnown RBP16.13■□□□□ 0.17
DDX55-209ENST00000542286 PDXKO00764 312 aa16.13■□□□□ 0.17
DDX55-209ENST00000542286 PSEN1P49768 467 aa16.13■□□□□ 0.17
DDX55-209ENST00000542286 FAM84AQ96KN4 292 aa16.13■□□□□ 0.17
DDX55-209ENST00000542286 FIZ1Q96SL8 496 aa16.13■□□□□ 0.17
DDX55-209ENST00000542286 POLR3CQ9BUI4 534 aaPredicted RBP16.13■□□□□ 0.17
DDX55-209ENST00000542286 RAVER2Q9HCJ3 691 aaKnown RBP16.13■□□□□ 0.17
DDX55-209ENST00000542286 CHORDC1Q9UHD1 332 aaPredicted RBP16.13■□□□□ 0.17
DDX55-209ENST00000542286 PIK3CDO00329 1044 aa16.13■□□□□ 0.17
DDX55-209ENST00000542286 IPO5O00410 1097 aaKnown RBP16.13■□□□□ 0.17
DDX55-209ENST00000542286 CALUO43852 315 aaPredicted RBP16.13■□□□□ 0.17
DDX55-209ENST00000542286 NPM3O75607 178 aaKnown RBP16.13■□□□□ 0.17
DDX55-209ENST00000542286 GLI1P08151 1106 aa16.13■□□□□ 0.17
DDX55-209ENST00000542286 CYP3A4P08684 503 aa16.13■□□□□ 0.17
DDX55-209ENST00000542286 PRELPP51888 382 aa16.13■□□□□ 0.17
DDX55-209ENST00000542286 SPDYE2Q495Y8 402 aa16.13■□□□□ 0.17
DDX55-209ENST00000542286 TTLL6Q8N841 843 aa16.13■□□□□ 0.17
DDX55-209ENST00000542286 CEP89Q96ST8 783 aa16.13■□□□□ 0.17
DDX55-209ENST00000542286 RANBP17Q9H2T7 1088 aaKnown RBP16.13■□□□□ 0.17
DDX55-209ENST00000542286 CCPG1Q9ULG6 757 aa16.13■□□□□ 0.17
DDX55-209ENST00000542286 SAMM50Q9Y512 469 aa16.13■□□□□ 0.17
DDX55-209ENST00000542286 EPB41P11171 864 aaKnown RBP16.12■□□□□ 0.17
DDX55-209ENST00000542286 ALAS1P13196 640 aa16.12■□□□□ 0.17
DDX55-209ENST00000542286 AARSP49588 968 aaKnown RBP eCLIP16.12■□□□□ 0.17
DDX55-209ENST00000542286 DLG4P78352 724 aa16.12■□□□□ 0.17
DDX55-209ENST00000542286 NAB2Q15742 525 aa16.12■□□□□ 0.17
DDX55-209ENST00000542286 KLHL7Q8IXQ5 586 aa16.12■□□□□ 0.17
DDX55-209ENST00000542286 FAM178BQ8IXR5 827 aa16.12■□□□□ 0.17
DDX55-209ENST00000542286 FAM186BQ8IYM0 893 aa16.12■□□□□ 0.17
DDX55-209ENST00000542286 SLC5A5Q92911 643 aa16.12■□□□□ 0.17
DDX55-209ENST00000542286 HOOK2Q96ED9 719 aa16.12■□□□□ 0.17
DDX55-209ENST00000542286 WNK4Q96J92 1243 aa16.12■□□□□ 0.17
DDX55-209ENST00000542286 GPRC5CQ9NQ84 441 aa16.12■□□□□ 0.17
DDX55-209ENST00000542286 AIPL1Q9NZN9 384 aa16.12■□□□□ 0.17
DDX55-209ENST00000542286 PPP1R1BQ9UD71 204 aaPredicted RBP16.12■□□□□ 0.17
DDX55-209ENST00000542286 FAM184BQ9ULE4 1060 aa16.12■□□□□ 0.17
DDX55-209ENST00000542286 RBAK-RBAKDNI3L0D1 243 aa16.12■□□□□ 0.17
DDX55-209ENST00000542286 AGPSO00116 658 aa16.12■□□□□ 0.17
DDX55-209ENST00000542286 WNT10BO00744 389 aa16.12■□□□□ 0.17
DDX55-209ENST00000542286 ERLIN2O94905 339 aa16.12■□□□□ 0.17
DDX55-209ENST00000542286 EIF2AK2P19525 551 aaKnown RBP16.12■□□□□ 0.17
DDX55-209ENST00000542286 CAP2P40123 477 aa16.12■□□□□ 0.17
DDX55-209ENST00000542286 LIG3P49916 1009 aa16.12■□□□□ 0.17
DDX55-209ENST00000542286 ARHGAP44Q17R89 818 aa16.12■□□□□ 0.17
DDX55-209ENST00000542286 FRMD5Q7Z6J6 570 aa16.12■□□□□ 0.17
DDX55-209ENST00000542286 PALB2Q86YC2 1186 aa16.12■□□□□ 0.17
DDX55-209ENST00000542286 DAW1Q8N136 415 aa16.12■□□□□ 0.17
DDX55-209ENST00000542286 TSEN2Q8NCE0 465 aaKnown RBP16.12■□□□□ 0.17
DDX55-209ENST00000542286 IFT81Q8WYA0 676 aa16.12■□□□□ 0.17
DDX55-209ENST00000542286 KAT2BQ92831 832 aa16.12■□□□□ 0.17
DDX55-209ENST00000542286 KRT12Q99456 494 aa16.12■□□□□ 0.17
DDX55-209ENST00000542286 VIPAS39Q9H9C1 493 aa16.12■□□□□ 0.17
DDX55-209ENST00000542286 PARVGQ9HBI0 331 aa16.12■□□□□ 0.17
DDX55-209ENST00000542286 TELO2Q9Y4R8 837 aa16.12■□□□□ 0.17
DDX55-209ENST00000542286 HIP1RO75146 1068 aa16.11■□□□□ 0.17
DDX55-209ENST00000542286 VIL1P09327 827 aaKnown RBP16.11■□□□□ 0.17
DDX55-209ENST00000542286 FAM153BP0C7A2 387 aa16.11■□□□□ 0.17
DDX55-209ENST00000542286 KCNA3P22001 575 aa16.11■□□□□ 0.17
DDX55-209ENST00000542286 RXRBP28702 533 aa16.11■□□□□ 0.17
DDX55-209ENST00000542286 SPP2Q13103 211 aa16.11■□□□□ 0.17
DDX55-209ENST00000542286 FAM153CQ494X1 144 aa16.11■□□□□ 0.17
DDX55-209ENST00000542286 IQCDQ96DY2 449 aa16.11■□□□□ 0.17
DDX55-209ENST00000542286 FAM107BQ9H098 131 aa16.11■□□□□ 0.17
DDX55-209ENST00000542286 FAM153AQ9UHL3 310 aa16.11■□□□□ 0.17
DDX55-209ENST00000542286 ZNF536O15090 1300 aa16.11■□□□□ 0.17
DDX55-209ENST00000542286 KCNK3O14649 394 aa16.11■□□□□ 0.17
DDX55-209ENST00000542286 ABCB4P21439 1286 aa16.11■□□□□ 0.17
DDX55-209ENST00000542286 CXCL9Q07325 125 aa16.11■□□□□ 0.17
DDX55-209ENST00000542286 ALKBH5Q6P6C2 394 aaKnown RBP16.11■□□□□ 0.17
DDX55-209ENST00000542286 PPP4R3CPQ6ZMV5 832 aa16.11■□□□□ 0.17
DDX55-209ENST00000542286 AEBP2Q6ZN18 517 aaPredicted RBP16.11■□□□□ 0.17
DDX55-209ENST00000542286 U2AF1L4Q8WU68 220 aaKnown RBP16.11■□□□□ 0.17
DDX55-209ENST00000542286 KCNH7Q9NS40 1196 aa16.11■□□□□ 0.17
DDX55-209ENST00000542286 NAGPAQ9UK23 515 aa16.11■□□□□ 0.17
DDX55-209ENST00000542286 TCP1P17987 556 aaKnown RBP16.1■□□□□ 0.17
DDX55-209ENST00000542286 CARSP49589 748 aaKnown RBP16.1■□□□□ 0.17
DDX55-209ENST00000542286 SOX10P56693 466 aa16.1■□□□□ 0.17
DDX55-209ENST00000542286 GSCP56915 257 aaPredicted RBP16.1■□□□□ 0.17
DDX55-209ENST00000542286 ITGB3BPQ13352 177 aaPredicted RBP16.1■□□□□ 0.17
DDX55-209ENST00000542286 TTC19Q6DKK2 380 aaPredicted RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms