RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 RGS18Q9NS28 235 aa16■□□□□ 0.15
SNHG1-213ENST00000540725 RNF216Q9NWF9 866 aaPredicted RBP16■□□□□ 0.15
SNHG1-213ENST00000540725 VPS54Q9P1Q0 977 aa16■□□□□ 0.15
SNHG1-213ENST00000540725 CEP131Q9UPN4 1083 aa16■□□□□ 0.15
SNHG1-213ENST00000540725 SAMM50Q9Y512 469 aa16■□□□□ 0.15
SNHG1-213ENST00000540725 WDR64B1ANS9 1081 aa15.99■□□□□ 0.15
SNHG1-213ENST00000540725 C9IYK1 514 aa15.99■□□□□ 0.15
SNHG1-213ENST00000540725 MBTPS2O43462 519 aa15.99■□□□□ 0.15
SNHG1-213ENST00000540725 REC8O95072 547 aa15.99■□□□□ 0.15
SNHG1-213ENST00000540725 IRS1P35568 1242 aa15.99■□□□□ 0.15
SNHG1-213ENST00000540725 CCT2P78371 535 aaKnown RBP15.99■□□□□ 0.15
SNHG1-213ENST00000540725 ADAM15Q13444 863 aa15.99■□□□□ 0.15
SNHG1-213ENST00000540725 SMAD2Q15796 467 aaKnown RBP15.99■□□□□ 0.15
SNHG1-213ENST00000540725 SPOUT1Q5T280 376 aaKnown RBP15.99■□□□□ 0.15
SNHG1-213ENST00000540725 ADGRD2Q7Z7M1 963 aa15.99■□□□□ 0.15
SNHG1-213ENST00000540725 FAM167AQ96KS9 214 aa15.99■□□□□ 0.15
SNHG1-213ENST00000540725 C19orf67A6NJJ6 358 aa15.98■□□□□ 0.15
SNHG1-213ENST00000540725 TBKBP1A7MCY6 615 aa15.98■□□□□ 0.15
SNHG1-213ENST00000540725 MAGEB2O15479 319 aa15.98■□□□□ 0.15
SNHG1-213ENST00000540725 DCXO43602 365 aa15.98■□□□□ 0.15
SNHG1-213ENST00000540725 GPR32O75388 356 aa15.98■□□□□ 0.15
SNHG1-213ENST00000540725 PDIA3P30101 505 aaKnown RBP15.98■□□□□ 0.15
SNHG1-213ENST00000540725 NDUFV1P49821 464 aa15.98■□□□□ 0.15
SNHG1-213ENST00000540725 CLCN3P51790 818 aa15.98■□□□□ 0.15
SNHG1-213ENST00000540725 EVCP57679 992 aa15.98■□□□□ 0.15
SNHG1-213ENST00000540725 SMAD4Q13485 552 aaKnown RBP15.98■□□□□ 0.15
SNHG1-213ENST00000540725 FAM102BQ5T8I3 360 aa15.98■□□□□ 0.15
SNHG1-213ENST00000540725 DISC1Q9NRI5 854 aa15.98■□□□□ 0.15
SNHG1-213ENST00000540725 CD207Q9UJ71 328 aa15.98■□□□□ 0.15
SNHG1-213ENST00000540725 ARIH1Q9Y4X5 557 aaPredicted RBP15.98■□□□□ 0.15
SNHG1-213ENST00000540725 PCDHB12Q9Y5F1 795 aa15.98■□□□□ 0.15
SNHG1-213ENST00000540725 ZNF318Q5VUA4 2279 aa15.98■□□□□ 0.15
SNHG1-213ENST00000540725 PRR33A8MZF0 331 aa15.97■□□□□ 0.15
SNHG1-213ENST00000540725 MSH4O15457 936 aa15.97■□□□□ 0.15
SNHG1-213ENST00000540725 EDIL3O43854 480 aa15.97■□□□□ 0.15
SNHG1-213ENST00000540725 ZNF862O60290 1169 aa15.97■□□□□ 0.15
SNHG1-213ENST00000540725 DSC3Q14574 896 aa15.97■□□□□ 0.15
SNHG1-213ENST00000540725 EFCAB12Q6NXP0 572 aa15.97■□□□□ 0.15
SNHG1-213ENST00000540725 LINC01465Q8N7H1 131 aa15.97■□□□□ 0.15
SNHG1-213ENST00000540725 EFHBQ8N7U6 833 aa15.97■□□□□ 0.15
SNHG1-213ENST00000540725 CCDC136Q96JN2 1154 aa15.97■□□□□ 0.15
SNHG1-213ENST00000540725 MAP7D2Q96T17 732 aa15.97■□□□□ 0.15
SNHG1-213ENST00000540725 ATP6V0A4Q9HBG4 840 aa15.97■□□□□ 0.15
SNHG1-213ENST00000540725 SH3GLB2Q9NR46 395 aa15.97■□□□□ 0.15
SNHG1-213ENST00000540725 AAASQ9NRG9 546 aa15.97■□□□□ 0.15
SNHG1-213ENST00000540725 TMEM161AQ9NX61 479 aa15.97■□□□□ 0.15
SNHG1-213ENST00000540725 HCSTQ9UBK5 93 aa15.97■□□□□ 0.15
SNHG1-213ENST00000540725 AKT3Q9Y243 479 aa15.97■□□□□ 0.15
SNHG1-213ENST00000540725 PCDHGC5Q9Y5F6 944 aa15.97■□□□□ 0.15
SNHG1-213ENST00000540725 TECTAO75443 2155 aa15.96■□□□□ 0.15
SNHG1-213ENST00000540725 CHMP2AO43633 222 aa15.96■□□□□ 0.15
SNHG1-213ENST00000540725 GAS7O60861 476 aa15.96■□□□□ 0.15
SNHG1-213ENST00000540725 OATP04181 439 aa15.96■□□□□ 0.15
SNHG1-213ENST00000540725 FGFR1P11362 822 aa15.96■□□□□ 0.15
SNHG1-213ENST00000540725 TMOD1P28289 359 aa15.96■□□□□ 0.15
SNHG1-213ENST00000540725 NRIP1P48552 1158 aa15.96■□□□□ 0.15
SNHG1-213ENST00000540725 USP11P51784 963 aa15.96■□□□□ 0.15
SNHG1-213ENST00000540725 NLRP11P59045 1033 aaKnown RBP15.96■□□□□ 0.15
SNHG1-213ENST00000540725 NLRP5P59047 1200 aa15.96■□□□□ 0.15
SNHG1-213ENST00000540725 FAM189BP81408 668 aa15.96■□□□□ 0.15
SNHG1-213ENST00000540725 PRKCEQ02156 737 aa15.96■□□□□ 0.15
SNHG1-213ENST00000540725 UBE3AQ05086 875 aa15.96■□□□□ 0.15
SNHG1-213ENST00000540725 TOB2Q14106 344 aaPredicted RBP15.96■□□□□ 0.15
SNHG1-213ENST00000540725 RUFY3Q7L099 469 aa15.96■□□□□ 0.15
SNHG1-213ENST00000540725 TRIM22Q8IYM9 498 aa15.96■□□□□ 0.15
SNHG1-213ENST00000540725 LRRC71Q8N4P6 559 aa15.96■□□□□ 0.15
SNHG1-213ENST00000540725 SLC5A5Q92911 643 aa15.96■□□□□ 0.15
SNHG1-213ENST00000540725 MSLNLQ96KJ4 702 aa15.96■□□□□ 0.15
SNHG1-213ENST00000540725 POP1Q99575 1024 aaKnown RBP15.96■□□□□ 0.15
SNHG1-213ENST00000540725 RIT2Q99578 217 aa15.96■□□□□ 0.15
SNHG1-213ENST00000540725 ELAC1Q9H777 363 aaKnown RBP15.96■□□□□ 0.15
SNHG1-213ENST00000540725 NRBP2Q9NSY0 501 aa15.96■□□□□ 0.15
SNHG1-213ENST00000540725 TYW1Q9NV66 732 aaKnown RBP15.96■□□□□ 0.15
SNHG1-213ENST00000540725 FGF18O76093 207 aa15.95■□□□□ 0.14
SNHG1-213ENST00000540725 SFNP31947 248 aa15.95■□□□□ 0.14
SNHG1-213ENST00000540725 JAK3P52333 1124 aa15.95■□□□□ 0.14
SNHG1-213ENST00000540725 UGCGQ16739 394 aa15.95■□□□□ 0.14
SNHG1-213ENST00000540725 LRCH2Q5VUJ6 765 aa15.95■□□□□ 0.14
SNHG1-213ENST00000540725 RBM23Q86U06 439 aaKnown RBP15.95■□□□□ 0.14
SNHG1-213ENST00000540725 THNSL1Q8IYQ7 743 aa15.95■□□□□ 0.14
SNHG1-213ENST00000540725 COLGALT1Q8NBJ5 622 aa15.95■□□□□ 0.14
SNHG1-213ENST00000540725 TBCKQ8TEA7 893 aa15.95■□□□□ 0.14
SNHG1-213ENST00000540725 TEKT3Q9BXF9 490 aa15.95■□□□□ 0.14
SNHG1-213ENST00000540725 UPF3BQ9BZI7 483 aaKnown RBP15.95■□□□□ 0.14
SNHG1-213ENST00000540725 ADAMTS10Q9H324 1103 aa15.95■□□□□ 0.14
SNHG1-213ENST00000540725 UNC45AQ9H3U1 944 aa15.95■□□□□ 0.14
SNHG1-213ENST00000540725 TLR9Q9NR96 1032 aa15.95■□□□□ 0.14
SNHG1-213ENST00000540725 CLEC1BQ9P126 229 aa15.95■□□□□ 0.14
SNHG1-213ENST00000540725 EYA4O95677 639 aa15.94■□□□□ 0.14
SNHG1-213ENST00000540725 GLP2RO95838 553 aa15.94■□□□□ 0.14
SNHG1-213ENST00000540725 SSRP1Q08945 709 aaKnown RBP15.94■□□□□ 0.14
SNHG1-213ENST00000540725 CSPP1Q1MSJ5 1256 aa15.94■□□□□ 0.14
SNHG1-213ENST00000540725 ZNF710Q8N1W2 664 aa15.94■□□□□ 0.14
SNHG1-213ENST00000540725 MICAL1Q8TDZ2 1067 aa15.94■□□□□ 0.14
SNHG1-213ENST00000540725 GJA10Q969M2 543 aa15.94■□□□□ 0.14
SNHG1-213ENST00000540725 ZNF668Q96K58 619 aaPredicted RBP15.94■□□□□ 0.14
SNHG1-213ENST00000540725 C22orf23Q9BZE7 217 aa15.94■□□□□ 0.14
SNHG1-213ENST00000540725 TMEM117Q9H0C3 514 aa15.94■□□□□ 0.14
SNHG1-213ENST00000540725 CWH43Q9H720 699 aa15.94■□□□□ 0.14
SNHG1-213ENST00000540725 TLE6Q9H808 572 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms