RNA–Protein interactions for RNA: ENST00000538792.1

GCSHP4-201, Transcript of glycine cleavage system protein H pseudogene 4, humanhuman

BASIC

Gene GCSHP4, Length 439 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCSHP4-201ENST00000538792 CDIP1Q9H305 208 aa6.76□□□□□ -1.33
GCSHP4-201ENST00000538792 KDRP35968 1356 aa6.76□□□□□ -1.33
GCSHP4-201ENST00000538792 KDM6AO15550 1401 aaPredicted RBP6.76□□□□□ -1.33
GCSHP4-201ENST00000538792 PCDH11XQ9BZA7 1347 aa6.76□□□□□ -1.33
GCSHP4-201ENST00000538792 PCDH11YQ9BZA8 1340 aa6.76□□□□□ -1.33
GCSHP4-201ENST00000538792 PRODHO43272 600 aa6.75□□□□□ -1.33
GCSHP4-201ENST00000538792 NTRK3Q16288 839 aa6.75□□□□□ -1.33
GCSHP4-201ENST00000538792 SLC15A2Q16348 729 aa6.75□□□□□ -1.33
GCSHP4-201ENST00000538792 SULT6B1Q6IMI4 303 aa6.75□□□□□ -1.33
GCSHP4-201ENST00000538792 USP53Q70EK8 1073 aa6.75□□□□□ -1.33
GCSHP4-201ENST00000538792 SMIM5Q71RC9 77 aa6.75□□□□□ -1.33
GCSHP4-201ENST00000538792 MILR1Q7Z6M3 343 aa6.75□□□□□ -1.33
GCSHP4-201ENST00000538792 CKAP2LQ8IYA6 745 aa6.75□□□□□ -1.33
GCSHP4-201ENST00000538792 CHAMP1Q96JM3 812 aa6.75□□□□□ -1.33
GCSHP4-201ENST00000538792 CLDND1Q9NY35 253 aa6.75□□□□□ -1.33
GCSHP4-201ENST00000538792 PPARGC1AQ9UBK2 798 aaKnown RBP6.75□□□□□ -1.33
GCSHP4-201ENST00000538792 BLACEA4D250 179 aa6.74□□□□□ -1.33
GCSHP4-201ENST00000538792 H7BY64 318 aa6.74□□□□□ -1.33
GCSHP4-201ENST00000538792 HMOX1P09601 288 aa6.74□□□□□ -1.33
GCSHP4-201ENST00000538792 FGFR1P11362 822 aa6.74□□□□□ -1.33
GCSHP4-201ENST00000538792 ATP2B1P20020 1258 aa6.74□□□□□ -1.33
GCSHP4-201ENST00000538792 SLURP1P55000 103 aa6.74□□□□□ -1.33
GCSHP4-201ENST00000538792 CTSWP56202 376 aa6.74□□□□□ -1.33
GCSHP4-201ENST00000538792 LIPIQ6XZB0 460 aa6.74□□□□□ -1.33
GCSHP4-201ENST00000538792 ETV3LQ6ZN32 361 aa6.74□□□□□ -1.33
GCSHP4-201ENST00000538792 GORASP1Q9BQQ3 440 aa6.74□□□□□ -1.33
GCSHP4-201ENST00000538792 KRTAP4-7Q9BYR0 210 aa6.74□□□□□ -1.33
GCSHP4-201ENST00000538792 LUC7LQ9NQ29 371 aaKnown RBP6.74□□□□□ -1.33
GCSHP4-201ENST00000538792 SPATA6Q9NWH7 488 aaPredicted RBP6.74□□□□□ -1.33
GCSHP4-201ENST00000538792 ASAP1Q9ULH1 1129 aa6.74□□□□□ -1.33
GCSHP4-201ENST00000538792 TAF1LQ8IZX4 1826 aa6.73□□□□□ -1.33
GCSHP4-201ENST00000538792 IQCA1LA6NCM1 817 aa6.73□□□□□ -1.33
GCSHP4-201ENST00000538792 SASH1O94885 1247 aa6.73□□□□□ -1.33
GCSHP4-201ENST00000538792 PABPC1P11940 636 aaKnown RBP6.73□□□□□ -1.33
GCSHP4-201ENST00000538792 PPP2R1AP30153 589 aa6.73□□□□□ -1.33
GCSHP4-201ENST00000538792 STAT5AP42229 794 aa6.73□□□□□ -1.33
GCSHP4-201ENST00000538792 RBM10P98175 930 aaKnown RBP6.73□□□□□ -1.33
GCSHP4-201ENST00000538792 SMAD4Q13485 552 aaKnown RBP6.73□□□□□ -1.33
GCSHP4-201ENST00000538792 KCNT2Q6UVM3 1135 aa6.73□□□□□ -1.33
GCSHP4-201ENST00000538792 IFNL2Q8IZJ0 200 aa6.73□□□□□ -1.33
GCSHP4-201ENST00000538792 ZDHHC14Q8IZN3 488 aa6.73□□□□□ -1.33
GCSHP4-201ENST00000538792 PHF20Q9BVI0 1012 aa6.73□□□□□ -1.33
GCSHP4-201ENST00000538792 GPR27Q9NS67 375 aa6.73□□□□□ -1.33
GCSHP4-201ENST00000538792 COA3Q9Y2R0 106 aaPredicted RBP6.73□□□□□ -1.33
GCSHP4-201ENST00000538792 PNPLA7Q6ZV29 1317 aa6.73□□□□□ -1.33
GCSHP4-201ENST00000538792 PALLDQ8WX93 1383 aa6.72□□□□□ -1.33
GCSHP4-201ENST00000538792 SH3D21A4FU49 640 aa6.72□□□□□ -1.33
GCSHP4-201ENST00000538792 CCDC85CA6NKD9 419 aa6.72□□□□□ -1.33
GCSHP4-201ENST00000538792 PDPK1O15530 556 aa6.72□□□□□ -1.33
GCSHP4-201ENST00000538792 TADA3O75528 432 aa6.72□□□□□ -1.33
GCSHP4-201ENST00000538792 CYP2C8P10632 490 aa6.72□□□□□ -1.33
GCSHP4-201ENST00000538792 GTF2F1P35269 517 aaKnown RBP eCLIP6.72□□□□□ -1.33
GCSHP4-201ENST00000538792 ITPK1Q13572 414 aa6.72□□□□□ -1.33
GCSHP4-201ENST00000538792 MTHFSDQ2M296 383 aaKnown RBP6.72□□□□□ -1.33
GCSHP4-201ENST00000538792 ZNF530Q6P9A1 599 aaPredicted RBP6.72□□□□□ -1.33
GCSHP4-201ENST00000538792 CD300LDQ6UXZ3 194 aa6.72□□□□□ -1.33
GCSHP4-201ENST00000538792 NSMFQ6X4W1 530 aa6.72□□□□□ -1.33
GCSHP4-201ENST00000538792 STK32CQ86UX6 486 aa6.72□□□□□ -1.33
GCSHP4-201ENST00000538792 FAM126BQ8IXS8 530 aa6.72□□□□□ -1.33
GCSHP4-201ENST00000538792 SP8Q8IXZ3 490 aa6.72□□□□□ -1.33
GCSHP4-201ENST00000538792 LINC00482Q8N8I6 264 aa6.72□□□□□ -1.33
GCSHP4-201ENST00000538792 ARRDC4Q8NCT1 418 aa6.72□□□□□ -1.33
GCSHP4-201ENST00000538792 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.72□□□□□ -1.33
GCSHP4-201ENST00000538792 ZBTB8AQ96BR9 441 aa6.72□□□□□ -1.33
GCSHP4-201ENST00000538792 SPATA25Q9BR10 227 aa6.72□□□□□ -1.33
GCSHP4-201ENST00000538792 JAM3Q9BX67 310 aa6.72□□□□□ -1.33
GCSHP4-201ENST00000538792 STK32BQ9NY57 414 aa6.72□□□□□ -1.33
GCSHP4-201ENST00000538792 ZNF652Q9Y2D9 606 aa6.72□□□□□ -1.33
GCSHP4-201ENST00000538792 MYH14Q7Z406 1995 aaKnown RBP6.71□□□□□ -1.33
GCSHP4-201ENST00000538792 VIRMAQ69YN4 1812 aaKnown RBP6.71□□□□□ -1.33
GCSHP4-201ENST00000538792 PLEKHG2Q9H7P9 1386 aa6.71□□□□□ -1.33
GCSHP4-201ENST00000538792 COL24A1Q17RW2 1714 aa6.71□□□□□ -1.34
GCSHP4-201ENST00000538792 QSER1Q2KHR3 1735 aa6.71□□□□□ -1.34
GCSHP4-201ENST00000538792 TRAV20A0A0B4J274 112 aa6.71□□□□□ -1.34
GCSHP4-201ENST00000538792 TCRBV5S2A0A599 114 aa6.71□□□□□ -1.34
GCSHP4-201ENST00000538792 HGSO14964 777 aaPredicted RBP6.71□□□□□ -1.34
GCSHP4-201ENST00000538792 ADCY3O60266 1144 aa6.71□□□□□ -1.34
GCSHP4-201ENST00000538792 DIAPH1O60610 1272 aaKnown RBP6.71□□□□□ -1.34
GCSHP4-201ENST00000538792 CR1LQ2VPA4 569 aa6.71□□□□□ -1.34
GCSHP4-201ENST00000538792 PLEKHO1Q53GL0 409 aaPredicted RBP6.71□□□□□ -1.34
GCSHP4-201ENST00000538792 EMC4Q5J8M3 183 aa6.71□□□□□ -1.34
GCSHP4-201ENST00000538792 STEAP3Q658P3 488 aa6.71□□□□□ -1.34
GCSHP4-201ENST00000538792 LRRC47Q8N1G4 583 aaKnown RBP6.71□□□□□ -1.34
GCSHP4-201ENST00000538792 PHACTR3Q96KR7 559 aa6.71□□□□□ -1.34
GCSHP4-201ENST00000538792 C11orf84Q9BUA3 381 aaPredicted RBP6.71□□□□□ -1.34
GCSHP4-201ENST00000538792 SPATA9Q9BWV2 254 aa6.71□□□□□ -1.34
GCSHP4-201ENST00000538792 ADAM7Q9H2U9 754 aa6.71□□□□□ -1.34
GCSHP4-201ENST00000538792 PPP1R1BQ9UD71 204 aaPredicted RBP6.71□□□□□ -1.34
GCSHP4-201ENST00000538792 PFDN2Q9UHV9 154 aa6.71□□□□□ -1.34
GCSHP4-201ENST00000538792 CCNL1Q9UK58 526 aaPredicted RBP6.71□□□□□ -1.34
GCSHP4-201ENST00000538792 SCN11AQ9UI33 1791 aa6.71□□□□□ -1.34
GCSHP4-201ENST00000538792 C5P01031 1676 aa6.71□□□□□ -1.34
GCSHP4-201ENST00000538792 ADAMTS7Q9UKP4 1686 aa6.71□□□□□ -1.34
GCSHP4-201ENST00000538792 UBR3Q6ZT12 1888 aa6.7□□□□□ -1.34
GCSHP4-201ENST00000538792 ERVV-2B6SEH9 535 aa6.7□□□□□ -1.34
GCSHP4-201ENST00000538792 U2SURPO15042 1029 aaKnown RBP6.7□□□□□ -1.34
GCSHP4-201ENST00000538792 KCNC1P48547 511 aa6.7□□□□□ -1.34
GCSHP4-201ENST00000538792 DDX10Q13206 875 aaKnown RBP6.7□□□□□ -1.34
GCSHP4-201ENST00000538792 RASGRF1Q13972 1273 aa6.7□□□□□ -1.34
GCSHP4-201ENST00000538792 AMOTQ4VCS5 1084 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms