RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 LRRC43Q8N309 656 aa18.6■□□□□ 0.57
CHMP4A-203ENST00000527154 ZNF558Q96NG5 402 aa18.6■□□□□ 0.57
CHMP4A-203ENST00000527154 IL25Q9H293 177 aa18.6■□□□□ 0.57
CHMP4A-203ENST00000527154 CYP26B1Q9NR63 512 aa18.6■□□□□ 0.57
CHMP4A-203ENST00000527154 DZANK1Q9NVP4 752 aa18.6■□□□□ 0.57
CHMP4A-203ENST00000527154 SPG21Q9NZD8 308 aa18.6■□□□□ 0.57
CHMP4A-203ENST00000527154 ZBTB47Q9UFB7 747 aaPredicted RBP18.6■□□□□ 0.57
CHMP4A-203ENST00000527154 DUSP12Q9UNI6 340 aa18.6■□□□□ 0.57
CHMP4A-203ENST00000527154 COL1A2P08123 1366 aa18.59■□□□□ 0.57
CHMP4A-203ENST00000527154 HOXA2O43364 376 aa18.59■□□□□ 0.57
CHMP4A-203ENST00000527154 GPR32O75388 356 aa18.59■□□□□ 0.57
CHMP4A-203ENST00000527154 PUM1Q14671 1186 aaKnown RBP eCLIP18.59■□□□□ 0.572e-7■□□□□ 9.2
CHMP4A-203ENST00000527154 DGLUCYQ7Z3D6 616 aa18.59■□□□□ 0.57
CHMP4A-203ENST00000527154 KCNH7Q9NS40 1196 aa18.59■□□□□ 0.57
CHMP4A-203ENST00000527154 HIP1O00291 1037 aa18.58■□□□□ 0.56
CHMP4A-203ENST00000527154 HBP1O60381 514 aa18.58■□□□□ 0.56
CHMP4A-203ENST00000527154 PBX3P40426 434 aa18.58■□□□□ 0.56
CHMP4A-203ENST00000527154 CRYBB1P53674 252 aaPredicted RBP18.58■□□□□ 0.56
CHMP4A-203ENST00000527154 ATAT1Q5SQI0 421 aa18.58■□□□□ 0.56
CHMP4A-203ENST00000527154 FLCNQ8NFG4 579 aa18.58■□□□□ 0.56
CHMP4A-203ENST00000527154 SLC22A17Q8WUG5 538 aa18.58■□□□□ 0.56
CHMP4A-203ENST00000527154 IFIT3O14879 490 aaKnown RBP18.57■□□□□ 0.56
CHMP4A-203ENST00000527154 WEE2P0C1S8 567 aa18.57■□□□□ 0.56
CHMP4A-203ENST00000527154 ITGB3BPQ13352 177 aaPredicted RBP18.57■□□□□ 0.56
CHMP4A-203ENST00000527154 TDGQ13569 410 aa18.57■□□□□ 0.56
CHMP4A-203ENST00000527154 CLLU1OSQ5K130 101 aa18.57■□□□□ 0.56
CHMP4A-203ENST00000527154 ZNF598Q86UK7 904 aaKnown RBP18.57■□□□□ 0.56
CHMP4A-203ENST00000527154 PLEKHM2Q8IWE5 1019 aa18.57■□□□□ 0.56
CHMP4A-203ENST00000527154 FEZF2Q8TBJ5 459 aa18.57■□□□□ 0.56
CHMP4A-203ENST00000527154 IGDCC4Q8TDY8 1250 aa18.57■□□□□ 0.56
CHMP4A-203ENST00000527154 RRP36Q96EU6 259 aaKnown RBP18.57■□□□□ 0.56
CHMP4A-203ENST00000527154 ZBP1Q9H171 429 aa18.57■□□□□ 0.56
CHMP4A-203ENST00000527154 PSTPIP2Q9H939 334 aa18.57■□□□□ 0.56
CHMP4A-203ENST00000527154 DIAPH3Q9NSV4 1193 aa18.57■□□□□ 0.56
CHMP4A-203ENST00000527154 PKD2L1Q9P0L9 805 aa18.57■□□□□ 0.56
CHMP4A-203ENST00000527154 ACACBO00763 2458 aa18.57■□□□□ 0.56
CHMP4A-203ENST00000527154 GPR179Q6PRD1 2367 aa18.56■□□□□ 0.56
CHMP4A-203ENST00000527154 WTAPQ15007 396 aa18.56■□□□□ 0.56
CHMP4A-203ENST00000527154 RARS2Q5T160 578 aaKnown RBP18.56■□□□□ 0.56
CHMP4A-203ENST00000527154 TEX2Q8IWB9 1127 aa18.56■□□□□ 0.56
CHMP4A-203ENST00000527154 C12orf76Q8N812 135 aaPredicted RBP18.56■□□□□ 0.56
CHMP4A-203ENST00000527154 MXRA8Q9BRK3 442 aa18.56■□□□□ 0.56
CHMP4A-203ENST00000527154 LNPKQ9C0E8 428 aa18.56■□□□□ 0.56
CHMP4A-203ENST00000527154 DBR1Q9UK59 544 aaKnown RBP18.56■□□□□ 0.56
CHMP4A-203ENST00000527154 GINS2Q9Y248 185 aa18.56■□□□□ 0.56
CHMP4A-203ENST00000527154 FANCMQ8IYD8 2048 aa18.56■□□□□ 0.56
CHMP4A-203ENST00000527154 C22orf31O95567 290 aa18.55■□□□□ 0.56
CHMP4A-203ENST00000527154 CYP21A2P08686 494 aa18.55■□□□□ 0.56
CHMP4A-203ENST00000527154 ATP4AP20648 1035 aa18.55■□□□□ 0.56
CHMP4A-203ENST00000527154 ANTXR2P58335 489 aa18.55■□□□□ 0.56
CHMP4A-203ENST00000527154 KANK3Q6NY19 840 aa18.55■□□□□ 0.56
CHMP4A-203ENST00000527154 ABHD15Q6UXT9 468 aa18.55■□□□□ 0.56
CHMP4A-203ENST00000527154 CATIPQ7Z7H3 387 aa18.55■□□□□ 0.56
CHMP4A-203ENST00000527154 GPR149Q86SP6 731 aa18.55■□□□□ 0.56
CHMP4A-203ENST00000527154 ECHDC2Q86YB7 292 aa18.55■□□□□ 0.56
CHMP4A-203ENST00000527154 SMC5Q8IY18 1101 aa18.55■□□□□ 0.56
CHMP4A-203ENST00000527154 LINC01465Q8N7H1 131 aa18.55■□□□□ 0.56
CHMP4A-203ENST00000527154 CYP2W1Q8TAV3 490 aa18.55■□□□□ 0.56
CHMP4A-203ENST00000527154 OSMRQ99650 979 aa18.55■□□□□ 0.56
CHMP4A-203ENST00000527154 KCNK12Q9HB15 430 aa18.55■□□□□ 0.56
CHMP4A-203ENST00000527154 PCDHA6Q9UN73 950 aa18.55■□□□□ 0.56
CHMP4A-203ENST00000527154 PCDHA8Q9Y5H6 950 aa18.55■□□□□ 0.56
CHMP4A-203ENST00000527154 KRT37O76014 449 aa18.54■□□□□ 0.56
CHMP4A-203ENST00000527154 CCNE2O96020 404 aa18.54■□□□□ 0.56
CHMP4A-203ENST00000527154 CTSAP10619 480 aa18.54■□□□□ 0.56
CHMP4A-203ENST00000527154 EPCAMP16422 314 aa18.54■□□□□ 0.56
CHMP4A-203ENST00000527154 IBSPP21815 317 aaPredicted RBP18.54■□□□□ 0.56
CHMP4A-203ENST00000527154 POLGP54098 1239 aaPredicted RBP18.54■□□□□ 0.56
CHMP4A-203ENST00000527154 TRDNQ13061 729 aa18.54■□□□□ 0.56
CHMP4A-203ENST00000527154 KIZQ2M2Z5 673 aa18.54■□□□□ 0.56
CHMP4A-203ENST00000527154 ZNF484Q5JVG2 852 aa18.54■□□□□ 0.56
CHMP4A-203ENST00000527154 OTOP3Q7RTS5 596 aa18.54■□□□□ 0.56
CHMP4A-203ENST00000527154 SRBD1Q8N5C6 995 aaKnown RBP18.54■□□□□ 0.56
CHMP4A-203ENST00000527154 PIBF1Q8WXW3 757 aa18.54■□□□□ 0.56
CHMP4A-203ENST00000527154 RSPH1Q8WYR4 309 aa18.54■□□□□ 0.56
CHMP4A-203ENST00000527154 LZTS2Q9BRK4 669 aa18.54■□□□□ 0.56
CHMP4A-203ENST00000527154 AGO4Q9HCK5 861 aaKnown RBP18.54■□□□□ 0.56
CHMP4A-203ENST00000527154 DLGAP2Q9P1A6 1054 aa18.54■□□□□ 0.56
CHMP4A-203ENST00000527154 WNT16Q9UBV4 365 aa18.54■□□□□ 0.56
CHMP4A-203ENST00000527154 A0A0U1RQF3 1178 aa18.53■□□□□ 0.56
CHMP4A-203ENST00000527154 ERICH2A1L162 156 aa18.53■□□□□ 0.56
CHMP4A-203ENST00000527154 DDAH1O94760 285 aa18.53■□□□□ 0.56
CHMP4A-203ENST00000527154 GIT2Q14161 759 aa18.53■□□□□ 0.56
CHMP4A-203ENST00000527154 UBE2SQ16763 222 aa18.53■□□□□ 0.56
CHMP4A-203ENST00000527154 CCDC60Q8IWA6 550 aaPredicted RBP18.53■□□□□ 0.56
CHMP4A-203ENST00000527154 SIX5Q8N196 739 aa18.53■□□□□ 0.56
CHMP4A-203ENST00000527154 ACSF2Q96CM8 615 aaPredicted RBP18.53■□□□□ 0.56
CHMP4A-203ENST00000527154 SDF4Q9BRK5 362 aa18.53■□□□□ 0.56
CHMP4A-203ENST00000527154 RHOBTB2Q9BYZ6 727 aa18.53■□□□□ 0.56
CHMP4A-203ENST00000527154 IGSF9Q9P2J2 1179 aa18.53■□□□□ 0.56
CHMP4A-203ENST00000527154 TAF6LQ9Y6J9 622 aa18.53■□□□□ 0.56
CHMP4A-203ENST00000527154 KRBA1A5PL33 1030 aa18.52■□□□□ 0.56
CHMP4A-203ENST00000527154 SPDYE3A6NKU9 549 aa18.52■□□□□ 0.56
CHMP4A-203ENST00000527154 MEIS1O00470 390 aa18.52■□□□□ 0.56
CHMP4A-203ENST00000527154 PAPLNO95428 1278 aa18.52■□□□□ 0.56
CHMP4A-203ENST00000527154 CXCL14O95715 111 aa18.52■□□□□ 0.56
CHMP4A-203ENST00000527154 KIF5BP33176 963 aa18.52■□□□□ 0.56
CHMP4A-203ENST00000527154 BCAR1P56945 870 aa18.52■□□□□ 0.56
CHMP4A-203ENST00000527154 SART3Q15020 963 aaKnown RBP18.52■□□□□ 0.56
CHMP4A-203ENST00000527154 CEP55Q53EZ4 464 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms