RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 ZNF213O14771 459 aa20.09■□□□□ 0.81
PVT1-220ENST00000524165 NARSO43776 548 aaKnown RBP20.09■□□□□ 0.81
PVT1-220ENST00000524165 KINO60870 393 aaKnown RBP20.09■□□□□ 0.81
PVT1-220ENST00000524165 ADRB1P08588 477 aa20.09■□□□□ 0.81
PVT1-220ENST00000524165 CFHP08603 1231 aa20.09■□□□□ 0.81
PVT1-220ENST00000524165 PBX3P40426 434 aa20.09■□□□□ 0.81
PVT1-220ENST00000524165 VARS2Q5ST30 1063 aaKnown RBP20.09■□□□□ 0.81
PVT1-220ENST00000524165 GPR149Q86SP6 731 aa20.09■□□□□ 0.81
PVT1-220ENST00000524165 ZNF589Q86UQ0 364 aaPredicted RBP20.09■□□□□ 0.81
PVT1-220ENST00000524165 SLC39A11Q8N1S5 342 aa20.09■□□□□ 0.81
PVT1-220ENST00000524165 RTKNQ9BST9 563 aa20.09■□□□□ 0.81
PVT1-220ENST00000524165 RIOX1Q9H6W3 641 aa20.09■□□□□ 0.81
PVT1-220ENST00000524165 TBC1D17Q9HA65 648 aa20.09■□□□□ 0.81
PVT1-220ENST00000524165 PALM3A6NDB9 673 aaPredicted RBP20.08■□□□□ 0.81
PVT1-220ENST00000524165 CXCL14O95715 111 aa20.08■□□□□ 0.81
PVT1-220ENST00000524165 EPCAMP16422 314 aa20.08■□□□□ 0.81
PVT1-220ENST00000524165 PHLDB3Q6NSJ2 640 aa20.08■□□□□ 0.81
PVT1-220ENST00000524165 TMC5Q6UXY8 1006 aa20.08■□□□□ 0.81
PVT1-220ENST00000524165 SLC22A17Q8WUG5 538 aa20.08■□□□□ 0.81
PVT1-220ENST00000524165 TMEM40Q8WWA1 233 aa20.08■□□□□ 0.81
PVT1-220ENST00000524165 PIGSQ96S52 555 aa20.08■□□□□ 0.81
PVT1-220ENST00000524165 PCYT2Q99447 389 aa20.08■□□□□ 0.81
PVT1-220ENST00000524165 ZSWIM5Q9P217 1185 aa20.08■□□□□ 0.81
PVT1-220ENST00000524165 NCDNQ9UBB6 729 aa20.08■□□□□ 0.81
PVT1-220ENST00000524165 CDV3Q9UKY7 258 aaKnown RBP20.08■□□□□ 0.81
PVT1-220ENST00000524165 IRAK3Q9Y616 596 aa20.08■□□□□ 0.81
PVT1-220ENST00000524165 PNMA6FA0A0J9YX94 578 aa20.07■□□□□ 0.8
PVT1-220ENST00000524165 B4E1Z4 1266 aa20.07■□□□□ 0.8
PVT1-220ENST00000524165 CA8P35219 290 aa20.07■□□□□ 0.8
PVT1-220ENST00000524165 LMNB2Q03252 620 aa20.07■□□□□ 0.8
PVT1-220ENST00000524165 GIT2Q14161 759 aa20.07■□□□□ 0.8
PVT1-220ENST00000524165 NONOQ15233 471 aaKnown RBP eCLIP20.07■□□□□ 0.8
PVT1-220ENST00000524165 SPECC1Q5M775 1068 aa20.07■□□□□ 0.8
PVT1-220ENST00000524165 MTHFD1LQ6UB35 978 aa20.07■□□□□ 0.8
PVT1-220ENST00000524165 CABP7Q86V35 215 aa20.07■□□□□ 0.8
PVT1-220ENST00000524165 ABI1Q8IZP0 508 aa20.07■□□□□ 0.8
PVT1-220ENST00000524165 TMEM87AQ8NBN3 555 aa20.07■□□□□ 0.8
PVT1-220ENST00000524165 TRAPPC12Q8WVT3 735 aa20.07■□□□□ 0.8
PVT1-220ENST00000524165 AZI2Q9H6S1 392 aa20.07■□□□□ 0.8
PVT1-220ENST00000524165 SFXN1Q9H9B4 322 aa20.07■□□□□ 0.8
PVT1-220ENST00000524165 GINS2Q9Y248 185 aa20.07■□□□□ 0.8
PVT1-220ENST00000524165 SIT1Q9Y3P8 196 aa20.07■□□□□ 0.8
PVT1-220ENST00000524165 MIA3Q5JRA6 1907 aa20.06■□□□□ 0.8
PVT1-220ENST00000524165 SPTLC1O15269 473 aa20.06■□□□□ 0.8
PVT1-220ENST00000524165 DCNP07585 359 aaKnown RBP20.06■□□□□ 0.8
PVT1-220ENST00000524165 PLCB4Q15147 1175 aa20.06■□□□□ 0.8
PVT1-220ENST00000524165 SLC35G1Q2M3R5 365 aa20.06■□□□□ 0.8
PVT1-220ENST00000524165 ZNF528Q3MIS6 628 aa20.06■□□□□ 0.8
PVT1-220ENST00000524165 IFIT1BQ5T764 474 aaKnown RBP20.06■□□□□ 0.8
PVT1-220ENST00000524165 CDHR5Q9HBB8 845 aa20.06■□□□□ 0.8
PVT1-220ENST00000524165 RNF19AQ9NV58 838 aa20.06■□□□□ 0.8
PVT1-220ENST00000524165 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.05■□□□□ 0.8
PVT1-220ENST00000524165 DSC3Q14574 896 aa20.05■□□□□ 0.8
PVT1-220ENST00000524165 LETM2Q2VYF4 491 aa20.05■□□□□ 0.8
PVT1-220ENST00000524165 PLPPR4Q7Z2D5 763 aa20.05■□□□□ 0.8
PVT1-220ENST00000524165 SMARCC2Q8TAQ2 1214 aa20.05■□□□□ 0.8
PVT1-220ENST00000524165 CHAMP1Q96JM3 812 aa20.05■□□□□ 0.8
PVT1-220ENST00000524165 UBAC1Q9BSL1 405 aa20.05■□□□□ 0.8
PVT1-220ENST00000524165 ZBP1Q9H171 429 aa20.05■□□□□ 0.8
PVT1-220ENST00000524165 CA14Q9ULX7 337 aa20.05■□□□□ 0.8
PVT1-220ENST00000524165 SALL3Q9BXA9 1300 aa20.04■□□□□ 0.8
PVT1-220ENST00000524165 SRFP11831 508 aa20.04■□□□□ 0.8
PVT1-220ENST00000524165 C15orf39Q6ZRI6 1047 aa20.04■□□□□ 0.8
PVT1-220ENST00000524165 PPFIBP1Q86W92 1011 aa20.04■□□□□ 0.8
PVT1-220ENST00000524165 FEZF2Q8TBJ5 459 aa20.04■□□□□ 0.8
PVT1-220ENST00000524165 SECISBP2LQ93073 1101 aaKnown RBP20.04■□□□□ 0.8
PVT1-220ENST00000524165 PKD1L2Q7Z442 2459 aa20.04■□□□□ 0.8
PVT1-220ENST00000524165 DOCK8Q8NF50 2099 aa20.04■□□□□ 0.8
PVT1-220ENST00000524165 DCDC2BA2VCK2 349 aa20.03■□□□□ 0.8
PVT1-220ENST00000524165 PIK3CDO00329 1044 aa20.03■□□□□ 0.8
PVT1-220ENST00000524165 MAFGO15525 162 aa20.03■□□□□ 0.8
PVT1-220ENST00000524165 ITGB5P18084 799 aa20.03■□□□□ 0.8
PVT1-220ENST00000524165 ALDH7A1P49419 539 aaKnown RBP20.03■□□□□ 0.8
PVT1-220ENST00000524165 POLGP54098 1239 aaPredicted RBP20.03■□□□□ 0.8
PVT1-220ENST00000524165 MFAP1P55081 439 aaKnown RBP20.03■□□□□ 0.8
PVT1-220ENST00000524165 NMIQ13287 307 aaPredicted RBP20.03■□□□□ 0.8
PVT1-220ENST00000524165 COL9A2Q14055 689 aaPredicted RBP20.03■□□□□ 0.8
PVT1-220ENST00000524165 FAM228AQ86W67 206 aa20.03■□□□□ 0.8
PVT1-220ENST00000524165 KIAA0319LQ8IZA0 1049 aa20.03■□□□□ 0.8
PVT1-220ENST00000524165 MAML2Q8IZL2 1156 aaPredicted RBP20.03■□□□□ 0.8
PVT1-220ENST00000524165 VPS52Q8N1B4 723 aa20.03■□□□□ 0.8
PVT1-220ENST00000524165 SLC44A3Q8N4M1 653 aa20.03■□□□□ 0.8
PVT1-220ENST00000524165 CUL5Q93034 780 aa20.03■□□□□ 0.8
PVT1-220ENST00000524165 NXPE3Q969Y0 559 aa20.03■□□□□ 0.8
PVT1-220ENST00000524165 TMEM169Q96HH4 297 aa20.03■□□□□ 0.8
PVT1-220ENST00000524165 JPH1Q9HDC5 661 aaPredicted RBP20.03■□□□□ 0.8
PVT1-220ENST00000524165 PATJQ8NI35 1801 aa20.03■□□□□ 0.8
PVT1-220ENST00000524165 CYTH3O43739 400 aa20.02■□□□□ 0.8
PVT1-220ENST00000524165 CTSAP10619 480 aa20.02■□□□□ 0.8
PVT1-220ENST00000524165 KLRC1P26715 233 aa20.02■□□□□ 0.8
PVT1-220ENST00000524165 CRYBB1P53674 252 aaPredicted RBP20.02■□□□□ 0.8
PVT1-220ENST00000524165 MTMR1Q13613 665 aa20.02■□□□□ 0.8
PVT1-220ENST00000524165 USP17L6PQ6QN14 398 aa20.02■□□□□ 0.8
PVT1-220ENST00000524165 RSAD2Q8WXG1 361 aa20.02■□□□□ 0.8
PVT1-220ENST00000524165 KRT23Q9C075 422 aa20.02■□□□□ 0.8
PVT1-220ENST00000524165 POTEMA6NI47 508 aa20.01■□□□□ 0.79
PVT1-220ENST00000524165 MEIS2O14770 477 aa20.01■□□□□ 0.79
PVT1-220ENST00000524165 METAP2P50579 478 aaKnown RBP eCLIP20.01■□□□□ 0.79
PVT1-220ENST00000524165 STAT5BP51692 787 aa20.01■□□□□ 0.79
PVT1-220ENST00000524165 GRM4Q14833 912 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms