RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 KIF11P52732 1056 aa5.8□□□□□ -1.48
HMGB3P13-201ENST00000511263 DLX2Q07687 328 aaPredicted RBP5.8□□□□□ -1.48
HMGB3P13-201ENST00000511263 DALRD3Q5D0E6 543 aaKnown RBP5.8□□□□□ -1.48
HMGB3P13-201ENST00000511263 UTP14CQ5TAP6 766 aaKnown RBP5.8□□□□□ -1.48
HMGB3P13-201ENST00000511263 CPZQ66K79 652 aa5.8□□□□□ -1.48
HMGB3P13-201ENST00000511263 MCTP2Q6DN12 878 aa5.8□□□□□ -1.48
HMGB3P13-201ENST00000511263 ABHD17CQ6PCB6 329 aa5.8□□□□□ -1.48
HMGB3P13-201ENST00000511263 MTERF4Q7Z6M4 381 aaKnown RBP5.8□□□□□ -1.48
HMGB3P13-201ENST00000511263 ZNF761Q86XN6 746 aaPredicted RBP5.8□□□□□ -1.48
HMGB3P13-201ENST00000511263 TXNDC5Q8NBS9 432 aaKnown RBP5.8□□□□□ -1.48
HMGB3P13-201ENST00000511263 DLG3Q92796 817 aa5.8□□□□□ -1.48
HMGB3P13-201ENST00000511263 GBP4Q96PP9 640 aa5.8□□□□□ -1.48
HMGB3P13-201ENST00000511263 BTBD2Q9BX70 525 aa5.8□□□□□ -1.48
HMGB3P13-201ENST00000511263 MAPRE3Q9UPY8 281 aa5.8□□□□□ -1.48
HMGB3P13-201ENST00000511263 PRKAB1Q9Y478 270 aa5.8□□□□□ -1.48
HMGB3P13-201ENST00000511263 TARBP1Q13395 1621 aaKnown RBP5.79□□□□□ -1.48
HMGB3P13-201ENST00000511263 A0A1B0GTL3 188 aa5.79□□□□□ -1.48
HMGB3P13-201ENST00000511263 KPNA6O60684 536 aa5.79□□□□□ -1.48
HMGB3P13-201ENST00000511263 SOX5P35711 763 aa5.79□□□□□ -1.48
HMGB3P13-201ENST00000511263 GLRBP48167 497 aa5.79□□□□□ -1.48
HMGB3P13-201ENST00000511263 ZNF460Q14592 562 aa5.79□□□□□ -1.48
HMGB3P13-201ENST00000511263 PUM1Q14671 1186 aaKnown RBP eCLIP5.79□□□□□ -1.48
HMGB3P13-201ENST00000511263 TKFCQ3LXA3 575 aa5.79□□□□□ -1.48
HMGB3P13-201ENST00000511263 WDR72Q3MJ13 1102 aa5.79□□□□□ -1.48
HMGB3P13-201ENST00000511263 SPATS1Q496A3 300 aa5.79□□□□□ -1.48
HMGB3P13-201ENST00000511263 TM4SF20Q53R12 229 aa5.79□□□□□ -1.48
HMGB3P13-201ENST00000511263 PROSER1Q86XN7 944 aa5.79□□□□□ -1.48
HMGB3P13-201ENST00000511263 SLC39A2Q9NP94 309 aa5.79□□□□□ -1.48
HMGB3P13-201ENST00000511263 KCND1Q9NSA2 647 aa5.79□□□□□ -1.48
HMGB3P13-201ENST00000511263 KIAA0586Q9BVV6 1533 aa5.79□□□□□ -1.48
HMGB3P13-201ENST00000511263 SYNJ2O15056 1496 aa5.78□□□□□ -1.48
HMGB3P13-201ENST00000511263 KCNK3O14649 394 aa5.78□□□□□ -1.48
HMGB3P13-201ENST00000511263 ECE1P42892 770 aa5.78□□□□□ -1.48
HMGB3P13-201ENST00000511263 KPNA1P52294 538 aaPredicted RBP5.78□□□□□ -1.48
HMGB3P13-201ENST00000511263 GYS2P54840 703 aa5.78□□□□□ -1.48
HMGB3P13-201ENST00000511263 IRX6P78412 446 aaPredicted RBP5.78□□□□□ -1.48
HMGB3P13-201ENST00000511263 ROM1Q03395 351 aa5.78□□□□□ -1.48
HMGB3P13-201ENST00000511263 CT47A1Q5JQC4 288 aaPredicted RBP5.78□□□□□ -1.48
HMGB3P13-201ENST00000511263 UBXN11Q5T124 520 aa5.78□□□□□ -1.48
HMGB3P13-201ENST00000511263 TIGD7Q6NT04 549 aaPredicted RBP5.78□□□□□ -1.48
HMGB3P13-201ENST00000511263 STPG3Q8N7X2 389 aa5.78□□□□□ -1.48
HMGB3P13-201ENST00000511263 KIAA1958Q8N8K9 716 aa5.78□□□□□ -1.48
HMGB3P13-201ENST00000511263 ASB15Q8WXK1 588 aa5.78□□□□□ -1.48
HMGB3P13-201ENST00000511263 TACO1Q9BSH4 297 aaKnown RBP5.78□□□□□ -1.48
HMGB3P13-201ENST00000511263 SPO11Q9Y5K1 396 aa5.78□□□□□ -1.48
HMGB3P13-201ENST00000511263 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.77□□□□□ -1.49
HMGB3P13-201ENST00000511263 NOBOXO60393 691 aa5.77□□□□□ -1.49
HMGB3P13-201ENST00000511263 F2P00734 622 aa5.77□□□□□ -1.49
HMGB3P13-201ENST00000511263 KNG1P01042 644 aa5.77□□□□□ -1.49
HMGB3P13-201ENST00000511263 ZBTB48P10074 688 aaPredicted RBP5.77□□□□□ -1.49
HMGB3P13-201ENST00000511263 MYCLP1P12525 358 aaPredicted RBP5.77□□□□□ -1.49
HMGB3P13-201ENST00000511263 APEX1P27695 318 aaKnown RBP5.77□□□□□ -1.49
HMGB3P13-201ENST00000511263 POLD1P28340 1107 aa5.77□□□□□ -1.49
HMGB3P13-201ENST00000511263 MMP14P50281 582 aa5.77□□□□□ -1.49
HMGB3P13-201ENST00000511263 NFATC3Q12968 1075 aa5.77□□□□□ -1.49
HMGB3P13-201ENST00000511263 EPHA7Q15375 998 aa5.77□□□□□ -1.49
HMGB3P13-201ENST00000511263 C21orf62-AS1Q17RA5 79 aa5.77□□□□□ -1.49
HMGB3P13-201ENST00000511263 ZMAT1Q5H9K5 638 aa5.77□□□□□ -1.49
HMGB3P13-201ENST00000511263 ZFYVE27Q5T4F4 411 aa5.77□□□□□ -1.49
HMGB3P13-201ENST00000511263 EFHBQ8N7U6 833 aa5.77□□□□□ -1.49
HMGB3P13-201ENST00000511263 RPGRQ92834 1020 aaKnown RBP5.77□□□□□ -1.49
HMGB3P13-201ENST00000511263 BORCS6Q96GS4 357 aa5.77□□□□□ -1.49
HMGB3P13-201ENST00000511263 FOXB1Q99853 325 aa5.77□□□□□ -1.49
HMGB3P13-201ENST00000511263 CARD11Q9BXL7 1154 aa5.77□□□□□ -1.49
HMGB3P13-201ENST00000511263 OR10A5Q9H207 317 aa5.77□□□□□ -1.49
HMGB3P13-201ENST00000511263 PNNQ9H307 717 aaKnown RBP5.77□□□□□ -1.49
HMGB3P13-201ENST00000511263 UCKL1Q9NWZ5 548 aa5.77□□□□□ -1.49
HMGB3P13-201ENST00000511263 USP36Q9P275 1121 aaKnown RBP5.77□□□□□ -1.49
HMGB3P13-201ENST00000511263 KIF21AQ7Z4S6 1674 aa5.77□□□□□ -1.49
HMGB3P13-201ENST00000511263 ZNF608Q9ULD9 1512 aaPredicted RBP5.77□□□□□ -1.49
HMGB3P13-201ENST00000511263 THOC2Q8NI27 1593 aaKnown RBP5.76□□□□□ -1.49
HMGB3P13-201ENST00000511263 UBA6A0AVT1 1052 aaPredicted RBP5.76□□□□□ -1.49
HMGB3P13-201ENST00000511263 PRAMEF22A3QJZ6 481 aa5.76□□□□□ -1.49
HMGB3P13-201ENST00000511263 GOLGA6L3A6NEY3 463 aa5.76□□□□□ -1.49
HMGB3P13-201ENST00000511263 GOLGA6L22H0YM25 854 aa5.76□□□□□ -1.49
HMGB3P13-201ENST00000511263 TRAF5O00463 557 aa5.76□□□□□ -1.49
HMGB3P13-201ENST00000511263 PDE8AO60658 829 aa5.76□□□□□ -1.49
HMGB3P13-201ENST00000511263 MMEP08473 750 aa5.76□□□□□ -1.49
HMGB3P13-201ENST00000511263 CD40P25942 277 aa5.76□□□□□ -1.49
HMGB3P13-201ENST00000511263 MLLT6P55198 1093 aaPredicted RBP5.76□□□□□ -1.49
HMGB3P13-201ENST00000511263 SESN2P58004 480 aaPredicted RBP5.76□□□□□ -1.49
HMGB3P13-201ENST00000511263 TTC38Q5R3I4 469 aa5.76□□□□□ -1.49
HMGB3P13-201ENST00000511263 Q6ZUG5 572 aa5.76□□□□□ -1.49
HMGB3P13-201ENST00000511263 DDX46Q7L014 1031 aaKnown RBP5.76□□□□□ -1.49
HMGB3P13-201ENST00000511263 OTOP2Q7RTS6 562 aa5.76□□□□□ -1.49
HMGB3P13-201ENST00000511263 RALYLQ86SE5 291 aaKnown RBP5.76□□□□□ -1.49
HMGB3P13-201ENST00000511263 FERMT3Q86UX7 667 aa5.76□□□□□ -1.49
HMGB3P13-201ENST00000511263 PHYKPLQ8IUZ5 450 aa5.76□□□□□ -1.49
HMGB3P13-201ENST00000511263 C7orf31Q8N865 590 aa5.76□□□□□ -1.49
HMGB3P13-201ENST00000511263 USP7Q93009 1102 aa5.76□□□□□ -1.49
HMGB3P13-201ENST00000511263 TARS2Q9BW92 718 aaKnown RBP5.76□□□□□ -1.49
HMGB3P13-201ENST00000511263 CAAP1Q9H8G2 361 aa5.76□□□□□ -1.49
HMGB3P13-201ENST00000511263 BTBD7Q9P203 1132 aa5.76□□□□□ -1.49
HMGB3P13-201ENST00000511263 KCNG1Q9UIX4 513 aa5.76□□□□□ -1.49
HMGB3P13-201ENST00000511263 ADAM29Q9UKF5 820 aa5.76□□□□□ -1.49
HMGB3P13-201ENST00000511263 CNOT11Q9UKZ1 510 aaKnown RBP5.76□□□□□ -1.49
HMGB3P13-201ENST00000511263 SYNPO2Q9UMS6 1093 aa5.76□□□□□ -1.49
HMGB3P13-201ENST00000511263 ZDHHC9Q9Y397 364 aa5.76□□□□□ -1.49
HMGB3P13-201ENST00000511263 RAB11FIP3O75154 756 aa5.75□□□□□ -1.49
HMGB3P13-201ENST00000511263 MAFO75444 373 aaPredicted RBP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms