RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 CFHR4Q92496 578 aa5.03□□□□□ -1.6
HMGB1P29-201ENST00000505659 NINJ1Q92982 152 aa5.03□□□□□ -1.6
HMGB1P29-201ENST00000505659 C16orf92Q96LL3 132 aa5.03□□□□□ -1.6
HMGB1P29-201ENST00000505659 SEC61A2Q9H9S3 476 aa5.03□□□□□ -1.6
HMGB1P29-201ENST00000505659 INTS7Q9NVH2 962 aaKnown RBP5.03□□□□□ -1.6
HMGB1P29-201ENST00000505659 OXSMQ9NWU1 459 aa5.03□□□□□ -1.6
HMGB1P29-201ENST00000505659 FBXO10Q9UK96 956 aa5.03□□□□□ -1.6
HMGB1P29-201ENST00000505659 OAZ3Q9UMX2 235 aa5.03□□□□□ -1.6
HMGB1P29-201ENST00000505659 UBA6A0AVT1 1052 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P29-201ENST00000505659 ARHGAP6O43182 974 aa5.02□□□□□ -1.61
HMGB1P29-201ENST00000505659 ANTXR2P58335 489 aa5.02□□□□□ -1.61
HMGB1P29-201ENST00000505659 RAC3P60763 192 aa5.02□□□□□ -1.61
HMGB1P29-201ENST00000505659 DSG1Q02413 1049 aa5.02□□□□□ -1.61
HMGB1P29-201ENST00000505659 PUM1Q14671 1186 aaKnown RBP eCLIP5.02□□□□□ -1.61
HMGB1P29-201ENST00000505659 MYBPC3Q14896 1274 aa5.02□□□□□ -1.61
HMGB1P29-201ENST00000505659 ACAP1Q15027 740 aa5.02□□□□□ -1.61
HMGB1P29-201ENST00000505659 SEPT7Q16181 437 aaKnown RBP5.02□□□□□ -1.61
HMGB1P29-201ENST00000505659 ZMAT1Q5H9K5 638 aa5.02□□□□□ -1.61
HMGB1P29-201ENST00000505659 SLFN12LQ6IEE8 588 aa5.02□□□□□ -1.61
HMGB1P29-201ENST00000505659 RTKN2Q8IZC4 609 aa5.02□□□□□ -1.61
HMGB1P29-201ENST00000505659 SYNPOQ8N3V7 929 aa5.02□□□□□ -1.61
HMGB1P29-201ENST00000505659 GIMAP8Q8ND71 665 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P29-201ENST00000505659 Q8TCH9 128 aa5.02□□□□□ -1.61
HMGB1P29-201ENST00000505659 CALML6Q8TD86 181 aa5.02□□□□□ -1.61
HMGB1P29-201ENST00000505659 CHTF18Q8WVB6 975 aa5.02□□□□□ -1.61
HMGB1P29-201ENST00000505659 SCYL1Q96KG9 808 aa5.02□□□□□ -1.61
HMGB1P29-201ENST00000505659 GPR20Q99678 358 aa5.02□□□□□ -1.61
HMGB1P29-201ENST00000505659 TARS2Q9BW92 718 aaKnown RBP5.02□□□□□ -1.61
HMGB1P29-201ENST00000505659 KLC2Q9H0B6 622 aa5.02□□□□□ -1.61
HMGB1P29-201ENST00000505659 ACSS2Q9NR19 701 aa5.02□□□□□ -1.61
HMGB1P29-201ENST00000505659 FAM184BQ9ULE4 1060 aa5.02□□□□□ -1.61
HMGB1P29-201ENST00000505659 JAG2Q9Y219 1238 aa5.02□□□□□ -1.61
HMGB1P29-201ENST00000505659 ZNF623O75123 536 aa5.01□□□□□ -1.61
HMGB1P29-201ENST00000505659 STAT3P40763 770 aa5.01□□□□□ -1.61
HMGB1P29-201ENST00000505659 MEOX1P50221 254 aa5.01□□□□□ -1.61
HMGB1P29-201ENST00000505659 DUSP8Q13202 625 aa5.01□□□□□ -1.61
HMGB1P29-201ENST00000505659 ZNF174Q15697 407 aa5.01□□□□□ -1.61
HMGB1P29-201ENST00000505659 DALRD3Q5D0E6 543 aaKnown RBP5.01□□□□□ -1.61
HMGB1P29-201ENST00000505659 PRAMEF9Q5VWM5 478 aa5.01□□□□□ -1.61
HMGB1P29-201ENST00000505659 USP30Q70CQ3 517 aa5.01□□□□□ -1.61
HMGB1P29-201ENST00000505659 FUKQ8N0W3 1084 aa5.01□□□□□ -1.61
HMGB1P29-201ENST00000505659 OR5AN1Q8NGI8 311 aa5.01□□□□□ -1.61
HMGB1P29-201ENST00000505659 RTF1Q92541 710 aaKnown RBP5.01□□□□□ -1.61
HMGB1P29-201ENST00000505659 DVL3Q92997 716 aaPredicted RBP5.01□□□□□ -1.61
HMGB1P29-201ENST00000505659 MAML3Q96JK9 1138 aa5.01□□□□□ -1.61
HMGB1P29-201ENST00000505659 C1QTNF3Q9BXJ4 246 aa5.01□□□□□ -1.61
HMGB1P29-201ENST00000505659 C12orf65Q9H3J6 166 aaKnown RBP5.01□□□□□ -1.61
HMGB1P29-201ENST00000505659 MS4A5Q9H3V2 200 aa5.01□□□□□ -1.61
HMGB1P29-201ENST00000505659 TOMM22Q9NS69 142 aa5.01□□□□□ -1.61
HMGB1P29-201ENST00000505659 THG1LQ9NWX6 298 aaKnown RBP5.01□□□□□ -1.61
HMGB1P29-201ENST00000505659 ZFR2Q9UPR6 939 aaKnown RBP5.01□□□□□ -1.61
HMGB1P29-201ENST00000505659 TBX22Q9Y458 520 aa5.01□□□□□ -1.61
HMGB1P29-201ENST00000505659 LCHNA4D1U4 455 aa5□□□□□ -1.61
HMGB1P29-201ENST00000505659 CDC14BO60729 498 aa5□□□□□ -1.61
HMGB1P29-201ENST00000505659 F2P00734 622 aa5□□□□□ -1.61
HMGB1P29-201ENST00000505659 CR2P20023 1033 aa5□□□□□ -1.61
HMGB1P29-201ENST00000505659 ROM1Q03395 351 aa5□□□□□ -1.61
HMGB1P29-201ENST00000505659 HGFACQ04756 655 aa5□□□□□ -1.61
HMGB1P29-201ENST00000505659 ADAM15Q13444 863 aa5□□□□□ -1.61
HMGB1P29-201ENST00000505659 NFYCQ13952 458 aa5□□□□□ -1.61
HMGB1P29-201ENST00000505659 R3HDM1Q15032 1099 aaKnown RBP5□□□□□ -1.61
HMGB1P29-201ENST00000505659 EPHA7Q15375 998 aa5□□□□□ -1.61
HMGB1P29-201ENST00000505659 TTC38Q5R3I4 469 aa5□□□□□ -1.61
HMGB1P29-201ENST00000505659 OR14A2Q96R54 314 aa5□□□□□ -1.61
HMGB1P29-201ENST00000505659 TUBGCP5Q96RT8 1024 aa5□□□□□ -1.61
HMGB1P29-201ENST00000505659 FEZ1Q99689 392 aa5□□□□□ -1.61
HMGB1P29-201ENST00000505659 ORAI3Q9BRQ5 295 aa5□□□□□ -1.61
HMGB1P29-201ENST00000505659 PLA2G12BQ9BX93 195 aa5□□□□□ -1.61
HMGB1P29-201ENST00000505659 OR10A2Q9H208 303 aa5□□□□□ -1.61
HMGB1P29-201ENST00000505659 SEMA4AQ9H3S1 761 aa5□□□□□ -1.61
HMGB1P29-201ENST00000505659 POFUT1Q9H488 388 aa5□□□□□ -1.61
HMGB1P29-201ENST00000505659 DEF6Q9H4E7 631 aa5□□□□□ -1.61
HMGB1P29-201ENST00000505659 ZMAT4Q9H898 229 aa5□□□□□ -1.61
HMGB1P29-201ENST00000505659 ZKSCAN5Q9Y2L8 839 aa5□□□□□ -1.61
HMGB1P29-201ENST00000505659 SPO11Q9Y5K1 396 aa5□□□□□ -1.61
HMGB1P29-201ENST00000505659 TGM5O43548 720 aa4.99□□□□□ -1.61
HMGB1P29-201ENST00000505659 GAS7O60861 476 aa4.99□□□□□ -1.61
HMGB1P29-201ENST00000505659 APOL3O95236 402 aa4.99□□□□□ -1.61
HMGB1P29-201ENST00000505659 CYP17A1P05093 508 aa4.99□□□□□ -1.61
HMGB1P29-201ENST00000505659 POU3F2P20265 443 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P29-201ENST00000505659 SELENOPP49908 381 aa4.99□□□□□ -1.61
HMGB1P29-201ENST00000505659 ZXDCQ2QGD7 858 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P29-201ENST00000505659 UNQ6494/PRO21346Q6UXR6 183 aa4.99□□□□□ -1.61
HMGB1P29-201ENST00000505659 DBX2Q6ZNG2 339 aa4.99□□□□□ -1.61
HMGB1P29-201ENST00000505659 SPRED1Q7Z699 444 aa4.99□□□□□ -1.61
HMGB1P29-201ENST00000505659 KIAA0907Q7Z7F0 614 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P29-201ENST00000505659 GPR135Q8IZ08 494 aa4.99□□□□□ -1.61
HMGB1P29-201ENST00000505659 MFSD3Q96ES6 412 aa4.99□□□□□ -1.61
HMGB1P29-201ENST00000505659 GPR101Q96P66 508 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P29-201ENST00000505659 MYL10Q9BUA6 226 aa4.99□□□□□ -1.61
HMGB1P29-201ENST00000505659 PUF60Q9UHX1 559 aaKnown RBP4.99□□□□□ -1.61
HMGB1P29-201ENST00000505659 MATN3O15232 486 aa4.98□□□□□ -1.61
HMGB1P29-201ENST00000505659 MAFO75444 373 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P29-201ENST00000505659 RAD17O75943 681 aa4.98□□□□□ -1.61
HMGB1P29-201ENST00000505659 TNFRSF1AP19438 455 aa4.98□□□□□ -1.61
HMGB1P29-201ENST00000505659 MAP3K12Q12852 859 aa4.98□□□□□ -1.61
HMGB1P29-201ENST00000505659 SAFB2Q14151 953 aaKnown RBP eCLIP4.98□□□□□ -1.61
HMGB1P29-201ENST00000505659 SPDYAQ5MJ70 313 aa4.98□□□□□ -1.61
HMGB1P29-201ENST00000505659 GIMAP6Q6P9H5 292 aa4.98□□□□□ -1.61
HMGB1P29-201ENST00000505659 SH3RF3Q8TEJ3 882 aaPredicted RBP4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms