RNA–Protein interactions for RNA: ENST00000497318.1

SUPT20H-223, Transcript of SPT20 homolog, SAGA complex component, human

TSL 3

Gene SUPT20H, Length 734 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT20H-223	ENST00000497318	ATG7	O95352	703 aa		18.88	■□□□□ 0.61
SUPT20H-223	ENST00000497318	FOS	P01100	380 aa	Predicted RBP	18.88	■□□□□ 0.61
SUPT20H-223	ENST00000497318	CEP55	Q53EZ4	464 aa		18.88	■□□□□ 0.61
SUPT20H-223	ENST00000497318	LRRC43	Q8N309	656 aa		18.88	■□□□□ 0.61
SUPT20H-223	ENST00000497318	TMEM105	Q8N8V8	129 aa		18.88	■□□□□ 0.61
SUPT20H-223	ENST00000497318	MRPL43	Q8N983	215 aa	Known RBP	18.88	■□□□□ 0.61
SUPT20H-223	ENST00000497318	C2CD4D	B7Z1M9	353 aa		18.87	■□□□□ 0.61
SUPT20H-223	ENST00000497318	PLEKHA8P1	O95397	391 aa		18.87	■□□□□ 0.61
SUPT20H-223	ENST00000497318	IGHD	P01880	384 aa		18.87	■□□□□ 0.61
SUPT20H-223	ENST00000497318	ZSCAN20	P17040	1043 aa	Predicted RBP	18.87	■□□□□ 0.61
SUPT20H-223	ENST00000497318	ANTXR2	P58335	489 aa		18.87	■□□□□ 0.61
SUPT20H-223	ENST00000497318	PTH1R	Q03431	593 aa		18.87	■□□□□ 0.61
SUPT20H-223	ENST00000497318	KIZ	Q2M2Z5	673 aa		18.87	■□□□□ 0.61
SUPT20H-223	ENST00000497318	ATAT1	Q5SQI0	421 aa		18.87	■□□□□ 0.61
SUPT20H-223	ENST00000497318	PDXDC2P	Q6P474	469 aa		18.87	■□□□□ 0.61
SUPT20H-223	ENST00000497318	HEATR3	Q7Z4Q2	680 aa		18.87	■□□□□ 0.61
SUPT20H-223	ENST00000497318	MB21D2	Q8IYB1	491 aa	Predicted RBP	18.87	■□□□□ 0.61
SUPT20H-223	ENST00000497318	ZDHHC14	Q8IZN3	488 aa		18.87	■□□□□ 0.61
SUPT20H-223	ENST00000497318	ZNF710	Q8N1W2	664 aa		18.87	■□□□□ 0.61
SUPT20H-223	ENST00000497318	TDRD5	Q8NAT2	981 aa	Known RBP	18.87	■□□□□ 0.61
SUPT20H-223	ENST00000497318	TMEM40	Q8WWA1	233 aa		18.87	■□□□□ 0.61
SUPT20H-223	ENST00000497318	POMK	Q9H5K3	350 aa		18.87	■□□□□ 0.61
SUPT20H-223	ENST00000497318	AGO4	Q9HCK5	861 aa	Known RBP	18.87	■□□□□ 0.61
SUPT20H-223	ENST00000497318	HCST	Q9UBK5	93 aa		18.87	■□□□□ 0.61
SUPT20H-223	ENST00000497318	HCFC2	Q9Y5Z7	792 aa		18.87	■□□□□ 0.61
SUPT20H-223	ENST00000497318	IGKV6D-21	A0A0A0MT36	114 aa		18.86	■□□□□ 0.61
SUPT20H-223	ENST00000497318	AR	P10275	920 aa		18.86	■□□□□ 0.61
SUPT20H-223	ENST00000497318	ZNF76	P36508	570 aa		18.86	■□□□□ 0.61
SUPT20H-223	ENST00000497318	ID4	P47928	161 aa		18.86	■□□□□ 0.61
SUPT20H-223	ENST00000497318	CKAP2L	Q8IYA6	745 aa		18.86	■□□□□ 0.61
SUPT20H-223	ENST00000497318	METTL13	Q8N6R0	699 aa		18.86	■□□□□ 0.61
SUPT20H-223	ENST00000497318	EXOC6	Q8TAG9	804 aa		18.86	■□□□□ 0.61
SUPT20H-223	ENST00000497318	CYP2W1	Q8TAV3	490 aa		18.86	■□□□□ 0.61
SUPT20H-223	ENST00000497318	CASD1	Q96PB1	797 aa		18.86	■□□□□ 0.61
SUPT20H-223	ENST00000497318	OSMR	Q99650	979 aa		18.86	■□□□□ 0.61
SUPT20H-223	ENST00000497318	ZNF302	Q9NR11	478 aa		18.86	■□□□□ 0.61
SUPT20H-223	ENST00000497318	DZANK1	Q9NVP4	752 aa		18.86	■□□□□ 0.61
SUPT20H-223	ENST00000497318	GVINP1	Q7Z2Y8	2422 aa		18.85	■□□□□ 0.61
SUPT20H-223	ENST00000497318	C2orf71	A6NGG8	1288 aa		18.85	■□□□□ 0.61
SUPT20H-223	ENST00000497318	PRC1	O43663	620 aa		18.85	■□□□□ 0.61
SUPT20H-223	ENST00000497318	MCM5	P33992	734 aa		18.85	■□□□□ 0.61
SUPT20H-223	ENST00000497318	CA8	P35219	290 aa		18.85	■□□□□ 0.61
SUPT20H-223	ENST00000497318	ITGB3BP	Q13352	177 aa	Predicted RBP	18.85	■□□□□ 0.61
SUPT20H-223	ENST00000497318	DSC3	Q14574	896 aa		18.85	■□□□□ 0.61
SUPT20H-223	ENST00000497318	MIS18BP1	Q6P0N0	1132 aa		18.85	■□□□□ 0.61
SUPT20H-223	ENST00000497318	ABHD15	Q6UXT9	468 aa		18.85	■□□□□ 0.61
SUPT20H-223	ENST00000497318	FRMD5	Q7Z6J6	570 aa		18.85	■□□□□ 0.61
SUPT20H-223	ENST00000497318	FAM228A	Q86W67	206 aa		18.85	■□□□□ 0.61
SUPT20H-223	ENST00000497318	ADSSL1	Q8N142	457 aa		18.85	■□□□□ 0.61
SUPT20H-223	ENST00000497318	CMTR1	Q8N1G2	835 aa	Known RBP	18.85	■□□□□ 0.61
SUPT20H-223	ENST00000497318	TMEM87B	Q96K49	555 aa		18.85	■□□□□ 0.61
SUPT20H-223	ENST00000497318	LIMD1	Q9UGP4	676 aa		18.85	■□□□□ 0.61
SUPT20H-223	ENST00000497318	DBR1	Q9UK59	544 aa	Known RBP	18.85	■□□□□ 0.61
SUPT20H-223	ENST00000497318	UST	Q9Y2C2	406 aa		18.85	■□□□□ 0.61
SUPT20H-223	ENST00000497318	KIAA1671	Q9BY89	1806 aa		18.85	■□□□□ 0.61
SUPT20H-223	ENST00000497318	CARNS1	A5YM72	827 aa		18.84	■□□□□ 0.61
SUPT20H-223	ENST00000497318	MEIS1	O00470	390 aa		18.84	■□□□□ 0.61
SUPT20H-223	ENST00000497318	CLASP2	O75122	1294 aa	Known RBP	18.84	■□□□□ 0.61
SUPT20H-223	ENST00000497318	ALDH7A1	P49419	539 aa	Known RBP	18.84	■□□□□ 0.61
SUPT20H-223	ENST00000497318	LRRC55	Q6ZSA7	311 aa		18.84	■□□□□ 0.61
SUPT20H-223	ENST00000497318	CCDC82	Q8N4S0	544 aa		18.84	■□□□□ 0.61
SUPT20H-223	ENST00000497318	GLT8D2	Q9H1C3	349 aa		18.84	■□□□□ 0.61
SUPT20H-223	ENST00000497318	SLC12A7	Q9Y666	1083 aa		18.84	■□□□□ 0.61
SUPT20H-223	ENST00000497318	TAF6L	Q9Y6J9	622 aa		18.84	■□□□□ 0.61
SUPT20H-223	ENST00000497318	WDR87	Q6ZQQ6	2873 aa		18.84	■□□□□ 0.61
SUPT20H-223	ENST00000497318	PLXNA4	Q9HCM2	1894 aa		18.84	■□□□□ 0.61
SUPT20H-223	ENST00000497318	hCG_1642624	A0A1W2PR95	340 aa		18.83	■□□□□ 0.6
SUPT20H-223	ENST00000497318	MAGEB2	O15479	319 aa		18.83	■□□□□ 0.6
SUPT20H-223	ENST00000497318	CXCL14	O95715	111 aa		18.83	■□□□□ 0.6
SUPT20H-223	ENST00000497318	TMOD1	P28289	359 aa		18.83	■□□□□ 0.6
SUPT20H-223	ENST00000497318	LIFR	P42702	1097 aa		18.83	■□□□□ 0.6
SUPT20H-223	ENST00000497318	GIT2	Q14161	759 aa		18.83	■□□□□ 0.6
SUPT20H-223	ENST00000497318	RARS2	Q5T160	578 aa	Known RBP	18.83	■□□□□ 0.6
SUPT20H-223	ENST00000497318	SWSAP1	Q6NVH7	229 aa		18.83	■□□□□ 0.6
SUPT20H-223	ENST00000497318	NIPA1	Q7RTP0	329 aa		18.83	■□□□□ 0.6
SUPT20H-223	ENST00000497318	FANCB	Q8NB91	859 aa		18.83	■□□□□ 0.6
SUPT20H-223	ENST00000497318	RNF169	Q8NCN4	708 aa		18.83	■□□□□ 0.6
SUPT20H-223	ENST00000497318	FLCN	Q8NFG4	579 aa		18.83	■□□□□ 0.6
SUPT20H-223	ENST00000497318	BBX	Q8WY36	941 aa	Predicted RBP	18.83	■□□□□ 0.6
SUPT20H-223	ENST00000497318	ACSF2	Q96CM8	615 aa	Predicted RBP	18.83	■□□□□ 0.6
SUPT20H-223	ENST00000497318	MAP7D2	Q96T17	732 aa		18.83	■□□□□ 0.6
SUPT20H-223	ENST00000497318	PPP1R16B	Q96T49	567 aa		18.83	■□□□□ 0.6
SUPT20H-223	ENST00000497318	MRPL9	Q9BYD2	267 aa	Known RBP	18.83	■□□□□ 0.6
SUPT20H-223	ENST00000497318	RIC8A	Q9NPQ8	531 aa		18.83	■□□□□ 0.6
SUPT20H-223	ENST00000497318	CEP131	Q9UPN4	1083 aa		18.83	■□□□□ 0.6
SUPT20H-223	ENST00000497318	CACNA1A	O00555	2505 aa		18.83	■□□□□ 0.6
SUPT20H-223	ENST00000497318	DDX39A	O00148	427 aa	Known RBP	18.82	■□□□□ 0.6
SUPT20H-223	ENST00000497318	GPR32	O75388	356 aa		18.82	■□□□□ 0.6
SUPT20H-223	ENST00000497318	C22orf31	O95567	290 aa		18.82	■□□□□ 0.6
SUPT20H-223	ENST00000497318	CCNE2	O96020	404 aa		18.82	■□□□□ 0.6
SUPT20H-223	ENST00000497318	ASGR2	P07307	311 aa		18.82	■□□□□ 0.6
SUPT20H-223	ENST00000497318	CHML	P26374	656 aa		18.82	■□□□□ 0.6
SUPT20H-223	ENST00000497318	PBX3	P40426	434 aa		18.82	■□□□□ 0.6
SUPT20H-223	ENST00000497318	NAPA	P54920	295 aa		18.82	■□□□□ 0.6
SUPT20H-223	ENST00000497318	KIAA1841	Q6NSI8	718 aa		18.82	■□□□□ 0.6
SUPT20H-223	ENST00000497318	SYNE3	Q6ZMZ3	975 aa		18.82	■□□□□ 0.6
SUPT20H-223	ENST00000497318	TMTC3	Q6ZXV5	915 aa		18.82	■□□□□ 0.6
SUPT20H-223	ENST00000497318	ECHDC2	Q86YB7	292 aa		18.82	■□□□□ 0.6
SUPT20H-223	ENST00000497318	SLC39A11	Q8N1S5	342 aa		18.82	■□□□□ 0.6
SUPT20H-223	ENST00000497318	RSPH1	Q8WYR4	309 aa		18.82	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms