RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 OXER1Q8TDS5 423 aa10.83□□□□□ -0.68
MSH5-218ENST00000494646 TMEM40Q8WWA1 233 aa10.83□□□□□ -0.68
MSH5-218ENST00000494646 MRPL38Q96DV4 380 aaKnown RBP10.83□□□□□ -0.68
MSH5-218ENST00000494646 RIT2Q99578 217 aa10.83□□□□□ -0.68
MSH5-218ENST00000494646 ALG13Q9NP73 1137 aaKnown RBP10.83□□□□□ -0.68
MSH5-218ENST00000494646 LRFN2Q9ULH4 789 aa10.83□□□□□ -0.68
MSH5-218ENST00000494646 AKT3Q9Y243 479 aa10.83□□□□□ -0.68
MSH5-218ENST00000494646 ATG2AQ2TAZ0 1938 aa10.83□□□□□ -0.68
MSH5-218ENST00000494646 KDM3AQ9Y4C1 1321 aa10.83□□□□□ -0.68
MSH5-218ENST00000494646 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.82□□□□□ -0.68
MSH5-218ENST00000494646 CCDC194A0A1B0GVG4 234 aa10.82□□□□□ -0.68
MSH5-218ENST00000494646 DENND3A2RUS2 1198 aa10.82□□□□□ -0.68
MSH5-218ENST00000494646 TMEM150BA6NC51 233 aa10.82□□□□□ -0.68
MSH5-218ENST00000494646 GRM6O15303 877 aa10.82□□□□□ -0.68
MSH5-218ENST00000494646 MAGEB2O15479 319 aa10.82□□□□□ -0.68
MSH5-218ENST00000494646 GPR32O75388 356 aa10.82□□□□□ -0.68
MSH5-218ENST00000494646 CDKL5O76039 1030 aa10.82□□□□□ -0.68
MSH5-218ENST00000494646 OATP04181 439 aa10.82□□□□□ -0.68
MSH5-218ENST00000494646 CRYBB1P53674 252 aaPredicted RBP10.82□□□□□ -0.68
MSH5-218ENST00000494646 PRKCEQ02156 737 aa10.82□□□□□ -0.68
MSH5-218ENST00000494646 ME3Q16798 604 aa10.82□□□□□ -0.68
MSH5-218ENST00000494646 TCEAL5Q5H9L2 206 aa10.82□□□□□ -0.68
MSH5-218ENST00000494646 FAM102BQ5T8I3 360 aa10.82□□□□□ -0.68
MSH5-218ENST00000494646 GALNT17Q6IS24 598 aa10.82□□□□□ -0.68
MSH5-218ENST00000494646 CRIPAKQ8N1N5 446 aa10.82□□□□□ -0.68
MSH5-218ENST00000494646 DAGLBQ8NCG7 672 aa10.82□□□□□ -0.68
MSH5-218ENST00000494646 ADAM2Q99965 735 aa10.82□□□□□ -0.68
MSH5-218ENST00000494646 PHF20Q9BVI0 1012 aa10.82□□□□□ -0.68
MSH5-218ENST00000494646 UBE2ZQ9H832 354 aaPredicted RBP10.82□□□□□ -0.68
MSH5-218ENST00000494646 RC3H2Q9HBD1 1191 aaKnown RBP10.82□□□□□ -0.68
MSH5-218ENST00000494646 ERVK-5Q9HDB9 667 aa10.82□□□□□ -0.68
MSH5-218ENST00000494646 ORC3Q9UBD5 711 aaPredicted RBP10.82□□□□□ -0.68
MSH5-218ENST00000494646 DDX25Q9UHL0 483 aaKnown RBP10.82□□□□□ -0.68
MSH5-218ENST00000494646 CEP131Q9UPN4 1083 aa10.82□□□□□ -0.68
MSH5-218ENST00000494646 PCDHB7Q9Y5E2 793 aa10.82□□□□□ -0.68
MSH5-218ENST00000494646 MRPL42Q9Y6G3 142 aaKnown RBP10.82□□□□□ -0.68
MSH5-218ENST00000494646 ADGRA3Q8IWK6 1321 aa10.82□□□□□ -0.68
MSH5-218ENST00000494646 DDX11L8A8MPP1 907 aa10.81□□□□□ -0.68
MSH5-218ENST00000494646 GPR182O15218 404 aa10.81□□□□□ -0.68
MSH5-218ENST00000494646 SLC37A4O43826 429 aa10.81□□□□□ -0.68
MSH5-218ENST00000494646 MARCH6O60337 910 aa10.81□□□□□ -0.68
MSH5-218ENST00000494646 CCNT1O60563 726 aaKnown RBP10.81□□□□□ -0.68
MSH5-218ENST00000494646 CSDE1O75534 798 aaKnown RBP10.81□□□□□ -0.68
MSH5-218ENST00000494646 LARGE1O95461 756 aa10.81□□□□□ -0.68
MSH5-218ENST00000494646 RB1P06400 928 aa10.81□□□□□ -0.68
MSH5-218ENST00000494646 LINC00271P0C7V0 271 aa10.81□□□□□ -0.68
MSH5-218ENST00000494646 STAG3L1P0CL83 205 aa10.81□□□□□ -0.68
MSH5-218ENST00000494646 FDPSP14324 419 aaKnown RBP10.81□□□□□ -0.68
MSH5-218ENST00000494646 XBP1P17861 261 aa10.81□□□□□ -0.68
MSH5-218ENST00000494646 FGFR4P22455 802 aa10.81□□□□□ -0.68
MSH5-218ENST00000494646 KCNA5P22460 613 aa10.81□□□□□ -0.68
MSH5-218ENST00000494646 TMOD1P28289 359 aa10.81□□□□□ -0.68
MSH5-218ENST00000494646 SFNP31947 248 aa10.81□□□□□ -0.68
MSH5-218ENST00000494646 NEK4P51957 841 aa10.81□□□□□ -0.68
MSH5-218ENST00000494646 JAK3P52333 1124 aa10.81□□□□□ -0.68
MSH5-218ENST00000494646 FOSBP53539 338 aa10.81□□□□□ -0.68
MSH5-218ENST00000494646 ANAPC15P60006 121 aa10.81□□□□□ -0.68
MSH5-218ENST00000494646 ANKRD1Q15327 319 aa10.81□□□□□ -0.68
MSH5-218ENST00000494646 MTERF2Q49AM1 385 aa10.81□□□□□ -0.68
MSH5-218ENST00000494646 EARS2Q5JPH6 523 aaKnown RBP10.81□□□□□ -0.68
MSH5-218ENST00000494646 PIK3AP1Q6ZUJ8 805 aa10.81□□□□□ -0.68
MSH5-218ENST00000494646 KRT25Q7Z3Z0 450 aa10.81□□□□□ -0.68
MSH5-218ENST00000494646 FAM228AQ86W67 206 aa10.81□□□□□ -0.68
MSH5-218ENST00000494646 NPAS4Q8IUM7 802 aa10.81□□□□□ -0.68
MSH5-218ENST00000494646 FAM167AQ96KS9 214 aa10.81□□□□□ -0.68
MSH5-218ENST00000494646 MBOAT7Q96N66 472 aa10.81□□□□□ -0.68
MSH5-218ENST00000494646 IGFLR1Q9H665 355 aa10.81□□□□□ -0.68
MSH5-218ENST00000494646 RGS18Q9NS28 235 aa10.81□□□□□ -0.68
MSH5-218ENST00000494646 SEPT9Q9UHD8 586 aaPredicted RBP10.81□□□□□ -0.68
MSH5-218ENST00000494646 PLXNA4Q9HCM2 1894 aa10.81□□□□□ -0.68
MSH5-218ENST00000494646 FAM205CA6NFA0 338 aa10.8□□□□□ -0.68
MSH5-218ENST00000494646 EML1O00423 815 aa10.8□□□□□ -0.68
MSH5-218ENST00000494646 STBD1O95210 358 aa10.8□□□□□ -0.68
MSH5-218ENST00000494646 SARSP49591 514 aaKnown RBP10.8□□□□□ -0.68
MSH5-218ENST00000494646 TBC1D8BQ0IIM8 1120 aa10.8□□□□□ -0.68
MSH5-218ENST00000494646 NR5A1Q13285 461 aa10.8□□□□□ -0.68
MSH5-218ENST00000494646 DRP2Q13474 957 aa10.8□□□□□ -0.68
MSH5-218ENST00000494646 ODR4Q5SWX8 454 aa10.8□□□□□ -0.68
MSH5-218ENST00000494646 SPOUT1Q5T280 376 aaKnown RBP10.8□□□□□ -0.68
MSH5-218ENST00000494646 B3GNT9Q6UX72 402 aa10.8□□□□□ -0.68
MSH5-218ENST00000494646 SLC24A5Q71RS6 500 aa10.8□□□□□ -0.68
MSH5-218ENST00000494646 LINC01465Q8N7H1 131 aa10.8□□□□□ -0.68
MSH5-218ENST00000494646 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.8□□□□□ -0.68
MSH5-218ENST00000494646 ETNPPLQ8TBG4 499 aa10.8□□□□□ -0.68
MSH5-218ENST00000494646 CLP1Q92989 425 aaKnown RBP10.8□□□□□ -0.68
MSH5-218ENST00000494646 MAP7D2Q96T17 732 aa10.8□□□□□ -0.68
MSH5-218ENST00000494646 ADAMTS10Q9H324 1103 aa10.8□□□□□ -0.68
MSH5-218ENST00000494646 PLAGL2Q9UPG8 496 aa10.8□□□□□ -0.68
MSH5-218ENST00000494646 STK36Q9NRP7 1315 aa10.8□□□□□ -0.68
MSH5-218ENST00000494646 COL4A6Q14031 1691 aa10.79□□□□□ -0.68
MSH5-218ENST00000494646 TBKBP1A7MCY6 615 aa10.79□□□□□ -0.68
MSH5-218ENST00000494646 C9IYK1 514 aa10.79□□□□□ -0.68
MSH5-218ENST00000494646 C5orf67F2Z3F1 127 aa10.79□□□□□ -0.68
MSH5-218ENST00000494646 H3BQ06 376 aaPredicted RBP10.79□□□□□ -0.68
MSH5-218ENST00000494646 JAK2O60674 1132 aa10.79□□□□□ -0.68
MSH5-218ENST00000494646 CENPBP07199 599 aaPredicted RBP10.79□□□□□ -0.68
MSH5-218ENST00000494646 ZSCAN20P17040 1043 aaPredicted RBP10.79□□□□□ -0.68
MSH5-218ENST00000494646 DNAJB1P25685 340 aa10.79□□□□□ -0.68
MSH5-218ENST00000494646 GPC3P51654 580 aa10.79□□□□□ -0.68
MSH5-218ENST00000494646 CAMK1Q14012 370 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms