RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 TFR2Q9UP52 801 aa20.14■□□□□ 0.81
COL16A1-215ENST00000488897 TRIM17Q9Y577 477 aa20.14■□□□□ 0.81
COL16A1-215ENST00000488897 LRRIQ3A6PVS8 624 aaPredicted RBP20.13■□□□□ 0.81
COL16A1-215ENST00000488897 FKTNO75072 461 aa20.13■□□□□ 0.81
COL16A1-215ENST00000488897 CENPPQ6IPU0 288 aa20.13■□□□□ 0.81
COL16A1-215ENST00000488897 LEKR1Q6ZMV7 388 aa20.13■□□□□ 0.81
COL16A1-215ENST00000488897 FAM133AQ8N9E0 248 aa20.13■□□□□ 0.81
COL16A1-215ENST00000488897 PXMP2Q9NR77 195 aa20.13■□□□□ 0.81
COL16A1-215ENST00000488897 TELO2Q9Y4R8 837 aa20.13■□□□□ 0.81
COL16A1-215ENST00000488897 DNAJC25-GNG10A0A024R161 153 aa20.13■□□□□ 0.81
COL16A1-215ENST00000488897 RCCD1A6NED2 376 aa20.13■□□□□ 0.81
COL16A1-215ENST00000488897 SRGAP2O75044 1071 aa20.13■□□□□ 0.81
COL16A1-215ENST00000488897 FGFR1OPO95684 399 aaKnown RBP20.13■□□□□ 0.81
COL16A1-215ENST00000488897 HNRNPH3P31942 346 aaKnown RBP20.13■□□□□ 0.81
COL16A1-215ENST00000488897 MRPS9P82933 396 aaKnown RBP20.13■□□□□ 0.81
COL16A1-215ENST00000488897 MORN1Q5T089 497 aa20.13■□□□□ 0.81
COL16A1-215ENST00000488897 CAGE1Q8TC20 777 aa20.13■□□□□ 0.81
COL16A1-215ENST00000488897 GTF3C2Q8WUA4 911 aaPredicted RBP20.13■□□□□ 0.81
COL16A1-215ENST00000488897 SECISBP2LQ93073 1101 aaKnown RBP20.13■□□□□ 0.81
COL16A1-215ENST00000488897 MMTAG2Q9BU76 263 aaKnown RBP20.13■□□□□ 0.81
COL16A1-215ENST00000488897 PDGFCQ9NRA1 345 aa20.13■□□□□ 0.81
COL16A1-215ENST00000488897 MYH7BA7E2Y1 1941 aa20.12■□□□□ 0.81
COL16A1-215ENST00000488897 PVALEFA0A1B0GWK0 134 aa20.12■□□□□ 0.81
COL16A1-215ENST00000488897 ESYT2A0FGR8 921 aa20.12■□□□□ 0.81
COL16A1-215ENST00000488897 FAM86B1E9PN63 330 aa20.12■□□□□ 0.81
COL16A1-215ENST00000488897 USO1O60763 962 aaKnown RBP20.12■□□□□ 0.81
COL16A1-215ENST00000488897 FAM86B2P0C5J1 330 aa20.12■□□□□ 0.81
COL16A1-215ENST00000488897 FCGRTP55899 365 aa20.12■□□□□ 0.81
COL16A1-215ENST00000488897 PGM5Q15124 567 aa20.12■□□□□ 0.81
COL16A1-215ENST00000488897 GJC2Q5T442 439 aaPredicted RBP20.12■□□□□ 0.81
COL16A1-215ENST00000488897 SHCBP1Q8NEM2 672 aa20.12■□□□□ 0.81
COL16A1-215ENST00000488897 EEF2KMTQ96G04 330 aa20.12■□□□□ 0.81
COL16A1-215ENST00000488897 CAPZA3Q96KX2 299 aa20.12■□□□□ 0.81
COL16A1-215ENST00000488897 STK17AQ9UEE5 414 aa20.12■□□□□ 0.81
COL16A1-215ENST00000488897 FBXO40Q9UH90 709 aa20.12■□□□□ 0.81
COL16A1-215ENST00000488897 hCG_1984214I3L0E3 225 aa20.12■□□□□ 0.81
COL16A1-215ENST00000488897 IDEP14735 1019 aa20.12■□□□□ 0.81
COL16A1-215ENST00000488897 AARSP49588 968 aaKnown RBP eCLIP20.12■□□□□ 0.81
COL16A1-215ENST00000488897 TKFCQ3LXA3 575 aa20.12■□□□□ 0.81
COL16A1-215ENST00000488897 PPP1R18Q6NYC8 613 aa20.12■□□□□ 0.81
COL16A1-215ENST00000488897 ZNF713Q8N859 430 aaPredicted RBP20.12■□□□□ 0.81
COL16A1-215ENST00000488897 KIAA0895Q8NCT3 520 aa20.12■□□□□ 0.81
COL16A1-215ENST00000488897 PDCD2LQ9BRP1 358 aa20.12■□□□□ 0.81
COL16A1-215ENST00000488897 WDR11Q9BZH6 1224 aa20.12■□□□□ 0.81
COL16A1-215ENST00000488897 SEMA6BQ9H3T3 888 aa20.12■□□□□ 0.81
COL16A1-215ENST00000488897 PLAGL2Q9UPG8 496 aa20.12■□□□□ 0.81
COL16A1-215ENST00000488897 PIK3CDO00329 1044 aa20.11■□□□□ 0.81
COL16A1-215ENST00000488897 MGAMO43451 1857 aa20.11■□□□□ 0.81
COL16A1-215ENST00000488897 HSPA8P11142 646 aaKnown RBP20.11■□□□□ 0.81
COL16A1-215ENST00000488897 CAPN2P17655 700 aa20.11■□□□□ 0.81
COL16A1-215ENST00000488897 ALDH5A1P51649 535 aaPredicted RBP20.11■□□□□ 0.81
COL16A1-215ENST00000488897 IRX5P78411 483 aaPredicted RBP20.11■□□□□ 0.81
COL16A1-215ENST00000488897 ZNF792Q3KQV3 632 aa20.11■□□□□ 0.81
COL16A1-215ENST00000488897 VWA3BQ502W6 1294 aa20.11■□□□□ 0.81
COL16A1-215ENST00000488897 FBXO16Q8IX29 292 aaPredicted RBP20.11■□□□□ 0.81
COL16A1-215ENST00000488897 TRIM58Q8NG06 486 aa20.11■□□□□ 0.81
COL16A1-215ENST00000488897 LENG1Q96BZ8 264 aaPredicted RBP20.11■□□□□ 0.81
COL16A1-215ENST00000488897 TSPYL1Q9H0U9 437 aa20.11■□□□□ 0.81
COL16A1-215ENST00000488897 SLC37A4O43826 429 aa20.11■□□□□ 0.81
COL16A1-215ENST00000488897 NR3C2P08235 984 aa20.11■□□□□ 0.81
COL16A1-215ENST00000488897 ARHGAP4P98171 946 aa20.11■□□□□ 0.81
COL16A1-215ENST00000488897 MAP2K5Q13163 448 aa20.11■□□□□ 0.81
COL16A1-215ENST00000488897 CCDC70Q6NSX1 233 aa20.11■□□□□ 0.81
COL16A1-215ENST00000488897 UNC13DQ70J99 1090 aa20.11■□□□□ 0.81
COL16A1-215ENST00000488897 NUDT12Q9BQG2 462 aa20.11■□□□□ 0.81
COL16A1-215ENST00000488897 RGS20O76081 388 aa20.1■□□□□ 0.81
COL16A1-215ENST00000488897 IVLP07476 585 aa20.1■□□□□ 0.81
COL16A1-215ENST00000488897 CYP27A1Q02318 531 aa20.1■□□□□ 0.81
COL16A1-215ENST00000488897 RAD51AP2Q09MP3 1159 aa20.1■□□□□ 0.81
COL16A1-215ENST00000488897 SEPT14Q6ZU15 432 aa20.1■□□□□ 0.81
COL16A1-215ENST00000488897 MAML3Q96JK9 1138 aa20.1■□□□□ 0.81
COL16A1-215ENST00000488897 CFHR5Q9BXR6 569 aa20.1■□□□□ 0.81
COL16A1-215ENST00000488897 SLC39A2Q9NP94 309 aa20.1■□□□□ 0.81
COL16A1-215ENST00000488897 JADE2Q9NQC1 790 aa20.1■□□□□ 0.81
COL16A1-215ENST00000488897 LRWD1Q9UFC0 647 aa20.1■□□□□ 0.81
COL16A1-215ENST00000488897 JRKLQ9Y4A0 524 aa20.1■□□□□ 0.81
COL16A1-215ENST00000488897 TACC1O75410 805 aa20.1■□□□□ 0.81
COL16A1-215ENST00000488897 TXKP42681 527 aa20.1■□□□□ 0.81
COL16A1-215ENST00000488897 FXR2P51116 673 aaKnown RBP eCLIP20.1■□□□□ 0.81
COL16A1-215ENST00000488897 KIF22Q14807 665 aa20.1■□□□□ 0.81
COL16A1-215ENST00000488897 TMEM266Q2M3C6 531 aa20.1■□□□□ 0.81
COL16A1-215ENST00000488897 TRIB2Q92519 343 aa20.1■□□□□ 0.81
COL16A1-215ENST00000488897 MTMR9Q96QG7 549 aa20.1■□□□□ 0.81
COL16A1-215ENST00000488897 RAB34Q9BZG1 259 aa20.1■□□□□ 0.81
COL16A1-215ENST00000488897 LRRC27Q9C0I9 530 aa20.1■□□□□ 0.81
COL16A1-215ENST00000488897 NDST4Q9H3R1 872 aa20.1■□□□□ 0.81
COL16A1-215ENST00000488897 SAGE1Q9NXZ1 904 aa20.1■□□□□ 0.81
COL16A1-215ENST00000488897 MACROD2A1Z1Q3 448 aa20.09■□□□□ 0.81
COL16A1-215ENST00000488897 RPS6KA5O75582 802 aa20.09■□□□□ 0.81
COL16A1-215ENST00000488897 ITGB5P18084 799 aa20.09■□□□□ 0.81
COL16A1-215ENST00000488897 TNNT3P45378 269 aaPredicted RBP20.09■□□□□ 0.81
COL16A1-215ENST00000488897 CALCRLQ16602 461 aa20.09■□□□□ 0.81
COL16A1-215ENST00000488897 MAN2A1Q16706 1144 aa20.09■□□□□ 0.81
COL16A1-215ENST00000488897 OTOP1Q7RTM1 612 aa20.09■□□□□ 0.81
COL16A1-215ENST00000488897 POTEDQ86YR6 584 aa20.09■□□□□ 0.81
COL16A1-215ENST00000488897 GUF1Q8N442 669 aaKnown RBP20.09■□□□□ 0.81
COL16A1-215ENST00000488897 GOLGA6L1Q8N7Z2 621 aa20.09■□□□□ 0.81
COL16A1-215ENST00000488897 SH3TC2Q8TF17 1288 aa20.09■□□□□ 0.81
COL16A1-215ENST00000488897 CDK5RAP3Q96JB5 506 aa20.09■□□□□ 0.81
COL16A1-215ENST00000488897 RNF216Q9NWF9 866 aaPredicted RBP20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms