RNA–Protein interactions for RNA: ENST00000485402.5

TTC3-219, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,626 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-219ENST00000485402 KCNMA1Q12791 1236 aa16.2■□□□□ 0.18
TTC3-219ENST00000485402 CPLX4Q7Z7G2 160 aa16.2■□□□□ 0.18
TTC3-219ENST00000485402 PSTPIP2Q9H939 334 aa16.2■□□□□ 0.18
TTC3-219ENST00000485402 VCPKMTQ9H867 229 aa16.19■□□□□ 0.18
TTC3-219ENST00000485402 GDF3Q9NR23 364 aa16.19■□□□□ 0.18
TTC3-219ENST00000485402 USP17L15C9J2P7 530 aa16.19■□□□□ 0.18
TTC3-219ENST00000485402 USP17L13C9JLJ4 530 aa16.19■□□□□ 0.18
TTC3-219ENST00000485402 USP17L11C9JVI0 530 aa16.19■□□□□ 0.18
TTC3-219ENST00000485402 USP17L18D6R9N7 530 aa16.19■□□□□ 0.18
TTC3-219ENST00000485402 USP17L22D6RA61 530 aa16.19■□□□□ 0.18
TTC3-219ENST00000485402 USP17L17D6RBQ6 530 aa16.19■□□□□ 0.18
TTC3-219ENST00000485402 USP17L19D6RCP7 530 aa16.19■□□□□ 0.18
TTC3-219ENST00000485402 USP17L20D6RJB6 530 aa16.19■□□□□ 0.18
TTC3-219ENST00000485402 TLR2O60603 784 aa16.19■□□□□ 0.18
TTC3-219ENST00000485402 TDP2O95551 362 aa16.19■□□□□ 0.18
TTC3-219ENST00000485402 FNTAP49354 379 aa16.19■□□□□ 0.18
TTC3-219ENST00000485402 IFFO1Q0D2I5 559 aa16.19■□□□□ 0.18
TTC3-219ENST00000485402 USP17L24Q0WX57 530 aa16.19■□□□□ 0.18
TTC3-219ENST00000485402 DCAF15Q66K64 600 aa16.19■□□□□ 0.18
TTC3-219ENST00000485402 CCDC174Q6PII3 467 aa16.19■□□□□ 0.18
TTC3-219ENST00000485402 USP17L6PQ6QN14 398 aa16.19■□□□□ 0.18
TTC3-219ENST00000485402 CYFIP2Q96F07 1278 aa16.19■□□□□ 0.18
TTC3-219ENST00000485402 SPAG5Q96R06 1193 aa16.19■□□□□ 0.18
TTC3-219ENST00000485402 PRR12Q9ULL5 1215 aa16.19■□□□□ 0.18
TTC3-219ENST00000485402 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.19■□□□□ 0.18
TTC3-219ENST00000485402 ACTN1P12814 892 aa16.19■□□□□ 0.18
TTC3-219ENST00000485402 HSD17B3P37058 310 aa16.19■□□□□ 0.18
TTC3-219ENST00000485402 ITIH3Q06033 890 aa16.19■□□□□ 0.18
TTC3-219ENST00000485402 GLE1Q53GS7 698 aaKnown RBP16.19■□□□□ 0.18
TTC3-219ENST00000485402 KCNK18Q7Z418 384 aa16.19■□□□□ 0.18
TTC3-219ENST00000485402 KIRREL3Q8IZU9 778 aa16.19■□□□□ 0.18
TTC3-219ENST00000485402 GREB1LQ9C091 1923 aaPredicted RBP16.19■□□□□ 0.18
TTC3-219ENST00000485402 A6NNZ2 444 aa16.18■□□□□ 0.18
TTC3-219ENST00000485402 M0R2N6 131 aa16.18■□□□□ 0.18
TTC3-219ENST00000485402 ERVK-9P63128 1117 aa16.18■□□□□ 0.18
TTC3-219ENST00000485402 MAP3K10Q02779 954 aa16.18■□□□□ 0.18
TTC3-219ENST00000485402 GRB10Q13322 594 aa16.18■□□□□ 0.18
TTC3-219ENST00000485402 TUBB8Q3ZCM7 444 aa16.18■□□□□ 0.18
TTC3-219ENST00000485402 HGSNATQ68CP4 663 aa16.18■□□□□ 0.18
TTC3-219ENST00000485402 KRT25Q7Z3Z0 450 aa16.18■□□□□ 0.18
TTC3-219ENST00000485402 DAGLBQ8NCG7 672 aa16.18■□□□□ 0.18
TTC3-219ENST00000485402 UHMK1Q8TAS1 419 aaKnown RBP16.18■□□□□ 0.18
TTC3-219ENST00000485402 CUEDC2Q9H467 287 aa16.18■□□□□ 0.18
TTC3-219ENST00000485402 HAUS2Q9NVX0 235 aa16.18■□□□□ 0.18
TTC3-219ENST00000485402 AMACRQ9UHK6 382 aa16.18■□□□□ 0.18
TTC3-219ENST00000485402 KRT18P05783 430 aaKnown RBP16.18■□□□□ 0.18
TTC3-219ENST00000485402 HNRNPH3P31942 346 aaKnown RBP16.18■□□□□ 0.18
TTC3-219ENST00000485402 SPP2Q13103 211 aa16.18■□□□□ 0.18
TTC3-219ENST00000485402 QPCTQ16769 361 aa16.18■□□□□ 0.18
TTC3-219ENST00000485402 KRT71Q3SY84 523 aa16.18■□□□□ 0.18
TTC3-219ENST00000485402 TCERG1LQ5VWI1 586 aa16.18■□□□□ 0.18
TTC3-219ENST00000485402 FBXO11Q86XK2 927 aa16.18■□□□□ 0.18
TTC3-219ENST00000485402 MDM1Q8TC05 714 aa16.18■□□□□ 0.18
TTC3-219ENST00000485402 AK8Q96MA6 479 aa16.18■□□□□ 0.18
TTC3-219ENST00000485402 SLC40A1Q9NP59 571 aa16.18■□□□□ 0.18
TTC3-219ENST00000485402 BLOC1S4Q9NUP1 217 aa16.18■□□□□ 0.18
TTC3-219ENST00000485402 CTNND1O60716 968 aaKnown RBP16.18■□□□□ 0.18
TTC3-219ENST00000485402 FAM107AO95990 144 aa16.18■□□□□ 0.18
TTC3-219ENST00000485402 RPSAP08865 295 aaKnown RBP16.18■□□□□ 0.18
TTC3-219ENST00000485402 FLT3P36888 993 aa16.18■□□□□ 0.18
TTC3-219ENST00000485402 KRT79Q5XKE5 535 aa16.18■□□□□ 0.18
TTC3-219ENST00000485402 UNC13DQ70J99 1090 aa16.18■□□□□ 0.18
TTC3-219ENST00000485402 MYOCDQ8IZQ8 938 aa16.18■□□□□ 0.18
TTC3-219ENST00000485402 CUL5Q93034 780 aa16.18■□□□□ 0.18
TTC3-219ENST00000485402 DCPSQ96C86 337 aaKnown RBP16.18■□□□□ 0.18
TTC3-219ENST00000485402 AMNQ9BXJ7 453 aa16.18■□□□□ 0.18
TTC3-219ENST00000485402 ADARB2Q9NS39 739 aaKnown RBP16.18■□□□□ 0.18
TTC3-219ENST00000485402 DAPK3O43293 454 aa16.17■□□□□ 0.18
TTC3-219ENST00000485402 SERPING1P05155 500 aa16.17■□□□□ 0.18
TTC3-219ENST00000485402 MRPL12P52815 198 aaKnown RBP16.17■□□□□ 0.18
TTC3-219ENST00000485402 ITGB3BPQ13352 177 aaPredicted RBP16.17■□□□□ 0.18
TTC3-219ENST00000485402 TMEM266Q2M3C6 531 aa16.17■□□□□ 0.18
TTC3-219ENST00000485402 RNF10Q8N5U6 811 aaKnown RBP16.17■□□□□ 0.18
TTC3-219ENST00000485402 TSKSQ9UJT2 592 aa16.17■□□□□ 0.18
TTC3-219ENST00000485402 FBXL5Q9UKA1 691 aa16.17■□□□□ 0.18
TTC3-219ENST00000485402 POLR2AP24928 1970 aaKnown RBP16.17■□□□□ 0.18
TTC3-219ENST00000485402 NPHP3-ACAD11A0A0J9YXS1 232 aa16.17■□□□□ 0.18
TTC3-219ENST00000485402 GMNCA6NCL1 334 aa16.17■□□□□ 0.18
TTC3-219ENST00000485402 DCDC2CA8MYV0 355 aa16.17■□□□□ 0.18
TTC3-219ENST00000485402 HMGB1P1B2RPK0 211 aaPredicted RBP16.17■□□□□ 0.18
TTC3-219ENST00000485402 hCG_1984214I3L0E3 225 aa16.17■□□□□ 0.18
TTC3-219ENST00000485402 MAGOHP61326 146 aaKnown RBP16.17■□□□□ 0.18
TTC3-219ENST00000485402 SPRED3Q2MJR0 410 aa16.17■□□□□ 0.18
TTC3-219ENST00000485402 EP400NLQ6ZTU2 488 aa16.17■□□□□ 0.18
TTC3-219ENST00000485402 SULF1Q8IWU6 871 aa16.17■□□□□ 0.18
TTC3-219ENST00000485402 ZNF713Q8N859 430 aaPredicted RBP16.17■□□□□ 0.18
TTC3-219ENST00000485402 MAGOHBQ96A72 148 aaKnown RBP16.17■□□□□ 0.18
TTC3-219ENST00000485402 CELF4Q9BZC1 486 aaKnown RBP16.17■□□□□ 0.18
TTC3-219ENST00000485402 TAF1DQ9H5J8 278 aaPredicted RBP16.17■□□□□ 0.18
TTC3-219ENST00000485402 PICK1Q9NRD5 415 aa16.17■□□□□ 0.18
TTC3-219ENST00000485402 COL4A3BPQ9Y5P4 624 aa16.17■□□□□ 0.18
TTC3-219ENST00000485402 SBF1O95248 1867 aa16.17■□□□□ 0.18
TTC3-219ENST00000485402 ADM5C9JUS6 153 aa16.17■□□□□ 0.18
TTC3-219ENST00000485402 LAD1O00515 517 aa16.17■□□□□ 0.18
TTC3-219ENST00000485402 KRIT1O00522 736 aa16.17■□□□□ 0.18
TTC3-219ENST00000485402 NF2P35240 595 aa16.17■□□□□ 0.18
TTC3-219ENST00000485402 MTMR2Q13614 643 aa16.17■□□□□ 0.18
TTC3-219ENST00000485402 ASIC2Q16515 512 aa16.17■□□□□ 0.18
TTC3-219ENST00000485402 EAPPQ56P03 285 aaPredicted RBP16.17■□□□□ 0.18
TTC3-219ENST00000485402 ARFGAP2Q8N6H7 521 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms