RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 P4HBP07237 508 aaKnown RBP12.24□□□□□ -0.45
SMPD4-218ENST00000482171 FBXW10Q5XX13 1052 aa12.24□□□□□ -0.45
SMPD4-218ENST00000482171 TAB3Q8N5C8 712 aaPredicted RBP12.24□□□□□ -0.45
SMPD4-218ENST00000482171 ATG4CQ96DT6 458 aa12.24□□□□□ -0.45
SMPD4-218ENST00000482171 REEP2Q9BRK0 252 aa12.24□□□□□ -0.45
SMPD4-218ENST00000482171 A0A1B0GTH6 734 aa12.23□□□□□ -0.45
SMPD4-218ENST00000482171 RHOBTB3O94955 611 aa12.23□□□□□ -0.45
SMPD4-218ENST00000482171 IFNB1P01574 187 aa12.23□□□□□ -0.45
SMPD4-218ENST00000482171 CD58P19256 250 aa12.23□□□□□ -0.45
SMPD4-218ENST00000482171 OSBPP22059 807 aa12.23□□□□□ -0.45
SMPD4-218ENST00000482171 STXBP2Q15833 593 aa12.23□□□□□ -0.45
SMPD4-218ENST00000482171 AMIGO3Q86WK7 504 aa12.23□□□□□ -0.45
SMPD4-218ENST00000482171 APOBEC3FQ8IUX4 373 aaKnown RBP12.23□□□□□ -0.45
SMPD4-218ENST00000482171 THNSL1Q8IYQ7 743 aa12.23□□□□□ -0.45
SMPD4-218ENST00000482171 AKT1S1Q96B36 256 aa12.23□□□□□ -0.45
SMPD4-218ENST00000482171 KCNG1Q9UIX4 513 aa12.23□□□□□ -0.45
SMPD4-218ENST00000482171 HACL1Q9UJ83 578 aa12.23□□□□□ -0.45
SMPD4-218ENST00000482171 PPP1R3GB7ZBB8 358 aa12.23□□□□□ -0.45
SMPD4-218ENST00000482171 IFNAR2P48551 515 aa12.23□□□□□ -0.45
SMPD4-218ENST00000482171 CCNA1P78396 465 aa12.23□□□□□ -0.45
SMPD4-218ENST00000482171 HDLBPQ00341 1268 aaKnown RBP12.23□□□□□ -0.45
SMPD4-218ENST00000482171 ACTN3Q08043 901 aaPredicted RBP12.23□□□□□ -0.45
SMPD4-218ENST00000482171 ORC2Q13416 577 aaPredicted RBP12.23□□□□□ -0.45
SMPD4-218ENST00000482171 TRIM68Q6AZZ1 485 aa12.23□□□□□ -0.45
SMPD4-218ENST00000482171 FUT8Q9BYC5 575 aa12.23□□□□□ -0.45
SMPD4-218ENST00000482171 NKIRAS1Q9NYS0 192 aa12.23□□□□□ -0.45
SMPD4-218ENST00000482171 PCDHB4Q9Y5E5 795 aa12.23□□□□□ -0.45
SMPD4-218ENST00000482171 DISP2A7MBM2 1401 aa12.23□□□□□ -0.45
SMPD4-218ENST00000482171 RGPD2P0DJD1 1756 aa12.23□□□□□ -0.45
SMPD4-218ENST00000482171 DENND3A2RUS2 1198 aa12.23□□□□□ -0.45
SMPD4-218ENST00000482171 NR1D1P20393 614 aa12.23□□□□□ -0.45
SMPD4-218ENST00000482171 TM4SF1P30408 202 aa12.23□□□□□ -0.45
SMPD4-218ENST00000482171 KLK7P49862 253 aa12.23□□□□□ -0.45
SMPD4-218ENST00000482171 DACT2Q5SW24 774 aa12.23□□□□□ -0.45
SMPD4-218ENST00000482171 TBC1D22BQ9NU19 505 aa12.23□□□□□ -0.45
SMPD4-218ENST00000482171 DNAJC12Q9UKB3 198 aa12.23□□□□□ -0.45
SMPD4-218ENST00000482171 A0A087X0B3 334 aa12.23□□□□□ -0.45
SMPD4-218ENST00000482171 H0YCG3 227 aa12.23□□□□□ -0.45
SMPD4-218ENST00000482171 HIP1RO75146 1068 aa12.23□□□□□ -0.45
SMPD4-218ENST00000482171 SERPING1P05155 500 aa12.23□□□□□ -0.45
SMPD4-218ENST00000482171 YARSP54577 528 aaKnown RBP12.23□□□□□ -0.45
SMPD4-218ENST00000482171 ZC2HC1CQ53FD0 456 aaPredicted RBP12.23□□□□□ -0.45
SMPD4-218ENST00000482171 ZNF394Q53GI3 561 aa12.23□□□□□ -0.45
SMPD4-218ENST00000482171 ANKRD42Q8N9B4 389 aa12.23□□□□□ -0.45
SMPD4-218ENST00000482171 NFU1Q9UMS0 254 aa12.23□□□□□ -0.45
SMPD4-218ENST00000482171 FZD1Q9UP38 647 aa12.23□□□□□ -0.45
SMPD4-218ENST00000482171 RGS16O15492 202 aaPredicted RBP12.22□□□□□ -0.45
SMPD4-218ENST00000482171 PTK2Q05397 1052 aa12.22□□□□□ -0.45
SMPD4-218ENST00000482171 MTMR3Q13615 1198 aa12.22□□□□□ -0.45
SMPD4-218ENST00000482171 HIBCHQ6NVY1 386 aaPredicted RBP12.22□□□□□ -0.45
SMPD4-218ENST00000482171 PPP4R3CPQ6ZMV5 832 aa12.22□□□□□ -0.45
SMPD4-218ENST00000482171 ELOA2Q8IYF1 753 aaPredicted RBP12.22□□□□□ -0.45
SMPD4-218ENST00000482171 NKX2-3Q8TAU0 364 aa12.22□□□□□ -0.45
SMPD4-218ENST00000482171 ZNF653Q96CK0 615 aa12.22□□□□□ -0.45
SMPD4-218ENST00000482171 NCAPGQ9BPX3 1015 aa12.22□□□□□ -0.45
SMPD4-218ENST00000482171 ADPGKQ9BRR6 497 aa12.22□□□□□ -0.45
SMPD4-218ENST00000482171 MAK16Q9BXY0 300 aaKnown RBP12.22□□□□□ -0.45
SMPD4-218ENST00000482171 TRIM7Q9C029 511 aa12.22□□□□□ -0.45
SMPD4-218ENST00000482171 ESYT2A0FGR8 921 aa12.22□□□□□ -0.45
SMPD4-218ENST00000482171 TNNC2P02585 160 aa12.22□□□□□ -0.45
SMPD4-218ENST00000482171 SLC8A1P32418 973 aa12.22□□□□□ -0.45
SMPD4-218ENST00000482171 NSFP46459 744 aaKnown RBP12.22□□□□□ -0.45
SMPD4-218ENST00000482171 MFAP3P55082 362 aa12.22□□□□□ -0.45
SMPD4-218ENST00000482171 MXRA7P84157 204 aa12.22□□□□□ -0.45
SMPD4-218ENST00000482171 C6orf163Q5TEZ5 329 aa12.22□□□□□ -0.45
SMPD4-218ENST00000482171 SCARA5Q6ZMJ2 495 aa12.22□□□□□ -0.45
SMPD4-218ENST00000482171 REXO1L1PQ8IX06 675 aa12.22□□□□□ -0.45
SMPD4-218ENST00000482171 TC2NQ8N9U0 490 aa12.22□□□□□ -0.45
SMPD4-218ENST00000482171 GIMAP8Q8ND71 665 aaPredicted RBP12.22□□□□□ -0.45
SMPD4-218ENST00000482171 ZNF280CQ8ND82 737 aa12.22□□□□□ -0.45
SMPD4-218ENST00000482171 C7orf25Q9BPX7 421 aa12.22□□□□□ -0.45
SMPD4-218ENST00000482171 FAM49AQ9H0Q0 323 aaPredicted RBP12.22□□□□□ -0.45
SMPD4-218ENST00000482171 ACAD9Q9H845 621 aa12.22□□□□□ -0.45
SMPD4-218ENST00000482171 WDR46O15213 610 aaKnown RBP12.22□□□□□ -0.45
SMPD4-218ENST00000482171 ATF7P17544 494 aaPredicted RBP12.22□□□□□ -0.45
SMPD4-218ENST00000482171 COG2Q14746 738 aa12.22□□□□□ -0.45
SMPD4-218ENST00000482171 NR1I3Q14994 352 aa12.22□□□□□ -0.45
SMPD4-218ENST00000482171 NAALADL2Q58DX5 795 aa12.22□□□□□ -0.45
SMPD4-218ENST00000482171 CYP2W1Q8TAV3 490 aa12.22□□□□□ -0.45
SMPD4-218ENST00000482171 COG1Q8WTW3 980 aa12.22□□□□□ -0.45
SMPD4-218ENST00000482171 SPON1Q9HCB6 807 aa12.22□□□□□ -0.45
SMPD4-218ENST00000482171 TYW1Q9NV66 732 aaKnown RBP12.22□□□□□ -0.45
SMPD4-218ENST00000482171 TFR2Q9UP52 801 aa12.22□□□□□ -0.45
SMPD4-218ENST00000482171 BZW2Q9Y6E2 419 aaKnown RBP12.22□□□□□ -0.45
SMPD4-218ENST00000482171 ATP2A1O14983 1001 aa12.21□□□□□ -0.45
SMPD4-218ENST00000482171 EYA4O95677 639 aa12.21□□□□□ -0.45
SMPD4-218ENST00000482171 MYBP10242 640 aa12.21□□□□□ -0.45
SMPD4-218ENST00000482171 CAP2P40123 477 aa12.21□□□□□ -0.45
SMPD4-218ENST00000482171 KRT76Q01546 638 aa12.21□□□□□ -0.45
SMPD4-218ENST00000482171 ZNF746Q6NUN9 644 aaPredicted RBP12.21□□□□□ -0.45
SMPD4-218ENST00000482171 LMNTD2Q8IXW0 634 aa12.21□□□□□ -0.45
SMPD4-218ENST00000482171 PROM2Q8N271 834 aa12.21□□□□□ -0.45
SMPD4-218ENST00000482171 CCDC63Q8NA47 563 aa12.21□□□□□ -0.45
SMPD4-218ENST00000482171 XXYLT1Q8NBI6 393 aa12.21□□□□□ -0.45
SMPD4-218ENST00000482171 NOA1Q8NC60 698 aaKnown RBP12.21□□□□□ -0.45
SMPD4-218ENST00000482171 ZNF446Q9NWS9 450 aa12.21□□□□□ -0.45
SMPD4-218ENST00000482171 PLSCR1O15162 318 aa12.21□□□□□ -0.45
SMPD4-218ENST00000482171 RPS6P62753 249 aaKnown RBP12.21□□□□□ -0.45
SMPD4-218ENST00000482171 GRB10Q13322 594 aa12.21□□□□□ -0.45
SMPD4-218ENST00000482171 EPHA7Q15375 998 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms