RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 CMTR1Q8N1G2 835 aaKnown RBP21.64■■□□□ 1.05
NCKIPSD-209ENST00000470006 RNF169Q8NCN4 708 aa21.64■■□□□ 1.05
NCKIPSD-209ENST00000470006 OSMRQ99650 979 aa21.64■■□□□ 1.05
NCKIPSD-209ENST00000470006 MXRA8Q9BRK3 442 aa21.64■■□□□ 1.05
NCKIPSD-209ENST00000470006 SPG21Q9NZD8 308 aa21.64■■□□□ 1.05
NCKIPSD-209ENST00000470006 DBR1Q9UK59 544 aaKnown RBP21.64■■□□□ 1.05
NCKIPSD-209ENST00000470006 hCG_1642624A0A1W2PR95 340 aa21.63■■□□□ 1.05
NCKIPSD-209ENST00000470006 DDX39AO00148 427 aaKnown RBP21.63■■□□□ 1.05
NCKIPSD-209ENST00000470006 HBP1O60381 514 aa21.63■■□□□ 1.05
NCKIPSD-209ENST00000470006 PLEKHA8P1O95397 391 aa21.63■■□□□ 1.05
NCKIPSD-209ENST00000470006 SMARCA1P28370 1054 aa21.63■■□□□ 1.05
NCKIPSD-209ENST00000470006 SLC26A2P50443 739 aa21.63■■□□□ 1.05
NCKIPSD-209ENST00000470006 CLCN5P51795 746 aa21.63■■□□□ 1.05
NCKIPSD-209ENST00000470006 FAM160B1Q5W0V3 765 aa21.63■■□□□ 1.05
NCKIPSD-209ENST00000470006 LRRC43Q8N309 656 aa21.63■■□□□ 1.05
NCKIPSD-209ENST00000470006 IGDCC4Q8TDY8 1250 aa21.63■■□□□ 1.05
NCKIPSD-209ENST00000470006 MAP3K14Q99558 947 aa21.63■■□□□ 1.05
NCKIPSD-209ENST00000470006 ELAC1Q9H777 363 aaKnown RBP21.63■■□□□ 1.05
NCKIPSD-209ENST00000470006 NFASCO94856 1347 aa21.62■■□□□ 1.05
NCKIPSD-209ENST00000470006 DDAH1O94760 285 aa21.62■■□□□ 1.05
NCKIPSD-209ENST00000470006 CRYBB1P53674 252 aaPredicted RBP21.62■■□□□ 1.05
NCKIPSD-209ENST00000470006 FAM189BP81408 668 aa21.62■■□□□ 1.05
NCKIPSD-209ENST00000470006 ATAT1Q5SQI0 421 aa21.62■■□□□ 1.05
NCKIPSD-209ENST00000470006 LRRC55Q6ZSA7 311 aa21.62■■□□□ 1.05
NCKIPSD-209ENST00000470006 FAM228AQ86W67 206 aa21.62■■□□□ 1.05
NCKIPSD-209ENST00000470006 SMC5Q8IY18 1101 aa21.62■■□□□ 1.05
NCKIPSD-209ENST00000470006 CCDC82Q8N4S0 544 aa21.62■■□□□ 1.05
NCKIPSD-209ENST00000470006 SRBD1Q8N5C6 995 aaKnown RBP21.62■■□□□ 1.05
NCKIPSD-209ENST00000470006 METTL13Q8N6R0 699 aa21.62■■□□□ 1.05
NCKIPSD-209ENST00000470006 C12orf76Q8N812 135 aaPredicted RBP21.62■■□□□ 1.05
NCKIPSD-209ENST00000470006 MRPL43Q8N983 215 aaKnown RBP21.62■■□□□ 1.05
NCKIPSD-209ENST00000470006 CYP2W1Q8TAV3 490 aa21.62■■□□□ 1.05
NCKIPSD-209ENST00000470006 KCNG4Q8TDN1 519 aa21.62■■□□□ 1.05
NCKIPSD-209ENST00000470006 CASD1Q96PB1 797 aa21.62■■□□□ 1.05
NCKIPSD-209ENST00000470006 C2orf71A6NGG8 1288 aa21.61■■□□□ 1.05
NCKIPSD-209ENST00000470006 CLASP2O75122 1294 aaKnown RBP21.61■■□□□ 1.05
NCKIPSD-209ENST00000470006 ARP10275 920 aa21.61■■□□□ 1.05
NCKIPSD-209ENST00000470006 ZSCAN20P17040 1043 aaPredicted RBP21.61■■□□□ 1.05
NCKIPSD-209ENST00000470006 NUCB1Q02818 461 aa21.61■■□□□ 1.05
NCKIPSD-209ENST00000470006 CASC1Q6TDU7 716 aa21.61■■□□□ 1.05
NCKIPSD-209ENST00000470006 TRMT1LQ7Z2T5 733 aaKnown RBP21.61■■□□□ 1.05
NCKIPSD-209ENST00000470006 HEATR3Q7Z4Q2 680 aa21.61■■□□□ 1.05
NCKIPSD-209ENST00000470006 CKAP2LQ8IYA6 745 aa21.61■■□□□ 1.05
NCKIPSD-209ENST00000470006 PLCD3Q8N3E9 789 aa21.61■■□□□ 1.05
NCKIPSD-209ENST00000470006 TAF6LQ9Y6J9 622 aa21.61■■□□□ 1.05
NCKIPSD-209ENST00000470006 GVINP1Q7Z2Y8 2422 aa21.61■■□□□ 1.05
NCKIPSD-209ENST00000470006 CXCL14O95715 111 aa21.6■■□□□ 1.05
NCKIPSD-209ENST00000470006 VTNP04004 478 aa21.6■■□□□ 1.05
NCKIPSD-209ENST00000470006 ANTXR2P58335 489 aa21.6■■□□□ 1.05
NCKIPSD-209ENST00000470006 PTH1RQ03431 593 aa21.6■■□□□ 1.05
NCKIPSD-209ENST00000470006 ZNF484Q5JVG2 852 aa21.6■■□□□ 1.05
NCKIPSD-209ENST00000470006 PDXDC2PQ6P474 469 aa21.6■■□□□ 1.05
NCKIPSD-209ENST00000470006 ZDHHC14Q8IZN3 488 aa21.6■■□□□ 1.05
NCKIPSD-209ENST00000470006 DCHS1Q96JQ0 3298 aa21.6■■□□□ 1.05
NCKIPSD-209ENST00000470006 CCDC69A6NI79 296 aa21.59■■□□□ 1.05
NCKIPSD-209ENST00000470006 SPDYE4A6NLX3 237 aa21.59■■□□□ 1.05
NCKIPSD-209ENST00000470006 RXRAP19793 462 aa21.59■■□□□ 1.05
NCKIPSD-209ENST00000470006 ZNF76P36508 570 aa21.59■■□□□ 1.05
NCKIPSD-209ENST00000470006 ITGB3BPQ13352 177 aaPredicted RBP21.59■■□□□ 1.05
NCKIPSD-209ENST00000470006 KANK3Q6NY19 840 aa21.59■■□□□ 1.05
NCKIPSD-209ENST00000470006 RUFY2Q8WXA3 655 aa21.59■■□□□ 1.05
NCKIPSD-209ENST00000470006 PGBD1Q96JS3 809 aa21.59■■□□□ 1.05
NCKIPSD-209ENST00000470006 LY9Q9HBG7 655 aa21.59■■□□□ 1.05
NCKIPSD-209ENST00000470006 AGO4Q9HCK5 861 aaKnown RBP21.59■■□□□ 1.05
NCKIPSD-209ENST00000470006 ZNF302Q9NR11 478 aa21.59■■□□□ 1.05
NCKIPSD-209ENST00000470006 FBXL21Q9UKT6 434 aa21.59■■□□□ 1.05
NCKIPSD-209ENST00000470006 COL1A2P08123 1366 aa21.59■■□□□ 1.05
NCKIPSD-209ENST00000470006 STK25O00506 426 aa21.58■■□□□ 1.05
NCKIPSD-209ENST00000470006 ATG7O95352 703 aa21.58■■□□□ 1.05
NCKIPSD-209ENST00000470006 METAP2P50579 478 aaKnown RBP eCLIP21.58■■□□□ 1.05
NCKIPSD-209ENST00000470006 DSC3Q14574 896 aa21.58■■□□□ 1.05
NCKIPSD-209ENST00000470006 CEP55Q53EZ4 464 aa21.58■■□□□ 1.05
NCKIPSD-209ENST00000470006 CYP26B1Q9NR63 512 aa21.58■■□□□ 1.05
NCKIPSD-209ENST00000470006 DZANK1Q9NVP4 752 aa21.58■■□□□ 1.05
NCKIPSD-209ENST00000470006 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.57■■□□□ 1.04
NCKIPSD-209ENST00000470006 NT5C1B-RDH14C9J2C7 533 aa21.57■■□□□ 1.04
NCKIPSD-209ENST00000470006 PI15O43692 258 aa21.57■■□□□ 1.04
NCKIPSD-209ENST00000470006 ALDH7A1P49419 539 aaKnown RBP21.57■■□□□ 1.04
NCKIPSD-209ENST00000470006 ANGPT1Q15389 498 aa21.57■■□□□ 1.04
NCKIPSD-209ENST00000470006 KIAA1841Q6NSI8 718 aa21.57■■□□□ 1.04
NCKIPSD-209ENST00000470006 SWSAP1Q6NVH7 229 aa21.57■■□□□ 1.04
NCKIPSD-209ENST00000470006 MIS18BP1Q6P0N0 1132 aa21.57■■□□□ 1.04
NCKIPSD-209ENST00000470006 RAB11FIP4Q86YS3 637 aa21.57■■□□□ 1.04
NCKIPSD-209ENST00000470006 ACSF2Q96CM8 615 aaPredicted RBP21.57■■□□□ 1.04
NCKIPSD-209ENST00000470006 TMEM169Q96HH4 297 aa21.57■■□□□ 1.04
NCKIPSD-209ENST00000470006 RNF19AQ9NV58 838 aa21.57■■□□□ 1.04
NCKIPSD-209ENST00000470006 AKT3Q9Y243 479 aa21.57■■□□□ 1.04
NCKIPSD-209ENST00000470006 EOMESO95936 686 aa21.56■■□□□ 1.04
NCKIPSD-209ENST00000470006 CWF19L1Q69YN2 538 aaKnown RBP21.56■■□□□ 1.04
NCKIPSD-209ENST00000470006 ABHD15Q6UXT9 468 aa21.56■■□□□ 1.04
NCKIPSD-209ENST00000470006 ECHDC2Q86YB7 292 aa21.56■■□□□ 1.04
NCKIPSD-209ENST00000470006 CCDC60Q8IWA6 550 aaPredicted RBP21.56■■□□□ 1.04
NCKIPSD-209ENST00000470006 MB21D2Q8IYB1 491 aaPredicted RBP21.56■■□□□ 1.04
NCKIPSD-209ENST00000470006 VPS52Q8N1B4 723 aa21.56■■□□□ 1.04
NCKIPSD-209ENST00000470006 SLC39A11Q8N1S5 342 aa21.56■■□□□ 1.04
NCKIPSD-209ENST00000470006 HELQQ8TDG4 1101 aa21.56■■□□□ 1.04
NCKIPSD-209ENST00000470006 USTQ9Y2C2 406 aa21.56■■□□□ 1.04
NCKIPSD-209ENST00000470006 EP300Q09472 2414 aaPredicted RBP21.56■■□□□ 1.04
NCKIPSD-209ENST00000470006 IGKV6D-21A0A0A0MT36 114 aa21.55■■□□□ 1.04
NCKIPSD-209ENST00000470006 PRC1O43663 620 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 201.9 ms