RNA–Protein interactions for RNA: ENST00000464053.1

GYPC-205, Transcript of glycophorin C (Gerbich blood group), humanhuman

TSL 1 (best)

Gene GYPC, Length 1,805 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-205ENST00000464053 TRIB2Q92519 343 aa17.07■□□□□ 0.32
GYPC-205ENST00000464053 PPP1R9BQ96SB3 815 aa17.07■□□□□ 0.32
GYPC-205ENST00000464053 PRPF6O94906 941 aaKnown RBP17.07■□□□□ 0.32
GYPC-205ENST00000464053 GCNT3O95395 438 aa17.07■□□□□ 0.32
GYPC-205ENST00000464053 XRCC5P13010 732 aaKnown RBP17.07■□□□□ 0.32
GYPC-205ENST00000464053 FANCCQ00597 558 aa17.07■□□□□ 0.32
GYPC-205ENST00000464053 CCDC173Q0VFZ6 552 aa17.07■□□□□ 0.32
GYPC-205ENST00000464053 PLCB4Q15147 1175 aa17.07■□□□□ 0.32
GYPC-205ENST00000464053 TARBP2Q15633 366 aaKnown RBP17.07■□□□□ 0.32
GYPC-205ENST00000464053 TPD52L1Q16890 204 aaPredicted RBP17.07■□□□□ 0.32
GYPC-205ENST00000464053 OR6J1Q8NGC5 347 aa17.07■□□□□ 0.32
GYPC-205ENST00000464053 NRBP2Q9NSY0 501 aa17.07■□□□□ 0.32
GYPC-205ENST00000464053 GNEQ9Y223 722 aaKnown RBP17.07■□□□□ 0.32
GYPC-205ENST00000464053 NKRFO15226 690 aaKnown RBP eCLIP17.06■□□□□ 0.32
GYPC-205ENST00000464053 DGAT1O75907 488 aa17.06■□□□□ 0.32
GYPC-205ENST00000464053 LGALS2P05162 132 aa17.06■□□□□ 0.32
GYPC-205ENST00000464053 KCNA1Q09470 495 aa17.06■□□□□ 0.32
GYPC-205ENST00000464053 IRF5Q13568 498 aa17.06■□□□□ 0.32
GYPC-205ENST00000464053 KIF22Q14807 665 aa17.06■□□□□ 0.32
GYPC-205ENST00000464053 ZC2HC1CQ53FD0 456 aaPredicted RBP17.06■□□□□ 0.32
GYPC-205ENST00000464053 ZNF720Q7Z2F6 126 aa17.06■□□□□ 0.32
GYPC-205ENST00000464053 IRF2BP1Q8IU81 584 aa17.06■□□□□ 0.32
GYPC-205ENST00000464053 FAM178BQ8IXR5 827 aa17.06■□□□□ 0.32
GYPC-205ENST00000464053 TRPV1Q8NER1 839 aa17.06■□□□□ 0.32
GYPC-205ENST00000464053 CD99L2Q8TCZ2 262 aa17.06■□□□□ 0.32
GYPC-205ENST00000464053 EEF2KMTQ96G04 330 aa17.06■□□□□ 0.32
GYPC-205ENST00000464053 TIPINQ9BVW5 301 aa17.06■□□□□ 0.32
GYPC-205ENST00000464053 SMARCAD1Q9H4L7 1026 aa17.06■□□□□ 0.32
GYPC-205ENST00000464053 IFNKQ9P0W0 207 aa17.06■□□□□ 0.32
GYPC-205ENST00000464053 SEL1LQ9UBV2 794 aa17.06■□□□□ 0.32
GYPC-205ENST00000464053 BICDL2A1A5D9 508 aa17.05■□□□□ 0.32
GYPC-205ENST00000464053 DYNC1LI2O43237 492 aaPredicted RBP17.05■□□□□ 0.32
GYPC-205ENST00000464053 MMP3P08254 477 aa17.05■□□□□ 0.32
GYPC-205ENST00000464053 ZNF286BP0CG31 522 aa17.05■□□□□ 0.32
GYPC-205ENST00000464053 PLS3P13797 630 aa17.05■□□□□ 0.32
GYPC-205ENST00000464053 CDK11BP21127 795 aaKnown RBP17.05■□□□□ 0.32
GYPC-205ENST00000464053 IRX5P78411 483 aaPredicted RBP17.05■□□□□ 0.32
GYPC-205ENST00000464053 ZCWPW2Q504Y3 356 aa17.05■□□□□ 0.32
GYPC-205ENST00000464053 KSR1Q8IVT5 923 aa17.05■□□□□ 0.32
GYPC-205ENST00000464053 ZNF507Q8TCN5 953 aa17.05■□□□□ 0.32
GYPC-205ENST00000464053 BBXQ8WY36 941 aaPredicted RBP17.05■□□□□ 0.32
GYPC-205ENST00000464053 DRC1Q96MC2 740 aa17.05■□□□□ 0.32
GYPC-205ENST00000464053 SRRTQ9BXP5 876 aaKnown RBP17.05■□□□□ 0.32
GYPC-205ENST00000464053 KCTD10Q9H3F6 313 aa17.05■□□□□ 0.32
GYPC-205ENST00000464053 ATP6V0A4Q9HBG4 840 aa17.05■□□□□ 0.32
GYPC-205ENST00000464053 ZBTB42B2RXF5 422 aa17.05■□□□□ 0.32
GYPC-205ENST00000464053 GPR25O00155 361 aa17.05■□□□□ 0.32
GYPC-205ENST00000464053 TRIM32Q13049 653 aa17.05■□□□□ 0.32
GYPC-205ENST00000464053 EMC2Q15006 297 aa17.05■□□□□ 0.32
GYPC-205ENST00000464053 CSGALNACT2Q8N6G5 542 aa17.05■□□□□ 0.32
GYPC-205ENST00000464053 ATP8B4Q8TF62 1192 aa17.05■□□□□ 0.32
GYPC-205ENST00000464053 BSNDQ8WZ55 320 aa17.05■□□□□ 0.32
GYPC-205ENST00000464053 FAM167AQ96KS9 214 aa17.05■□□□□ 0.32
GYPC-205ENST00000464053 NAP1L5Q96NT1 182 aaPredicted RBP17.05■□□□□ 0.32
GYPC-205ENST00000464053 C16orf70Q9BSU1 422 aa17.05■□□□□ 0.32
GYPC-205ENST00000464053 XPO4Q9C0E2 1151 aaKnown RBP17.05■□□□□ 0.32
GYPC-205ENST00000464053 IKZF4Q9H2S9 585 aa17.05■□□□□ 0.32
GYPC-205ENST00000464053 RNPEPQ9H4A4 650 aa17.05■□□□□ 0.32
GYPC-205ENST00000464053 DHX33Q9H6R0 707 aaKnown RBP17.05■□□□□ 0.32
GYPC-205ENST00000464053 CASP8AP2Q9UKL3 1982 aa17.04■□□□□ 0.32
GYPC-205ENST00000464053 PPFIA4O75335 1185 aa17.04■□□□□ 0.32
GYPC-205ENST00000464053 SERPINC1P01008 464 aa17.04■□□□□ 0.32
GYPC-205ENST00000464053 POLGP54098 1239 aaPredicted RBP17.04■□□□□ 0.32
GYPC-205ENST00000464053 BMT2Q1RMZ1 405 aa17.04■□□□□ 0.32
GYPC-205ENST00000464053 APTXQ7Z2E3 356 aaKnown RBP17.04■□□□□ 0.32
GYPC-205ENST00000464053 TMEM143Q96AN5 459 aa17.04■□□□□ 0.32
GYPC-205ENST00000464053 STRA6Q9BX79 667 aa17.04■□□□□ 0.32
GYPC-205ENST00000464053 LARSQ9P2J5 1176 aaKnown RBP17.04■□□□□ 0.32
GYPC-205ENST00000464053 HOXD8P13378 290 aaPredicted RBP17.03■□□□□ 0.32
GYPC-205ENST00000464053 SLC26A2P50443 739 aa17.03■□□□□ 0.32
GYPC-205ENST00000464053 PEX3P56589 373 aa17.03■□□□□ 0.32
GYPC-205ENST00000464053 LRRC63Q05C16 580 aa17.03■□□□□ 0.32
GYPC-205ENST00000464053 KNOP1Q1ED39 458 aaKnown RBP17.03■□□□□ 0.32
GYPC-205ENST00000464053 TLK2Q86UE8 772 aa17.03■□□□□ 0.32
GYPC-205ENST00000464053 MCPH1Q8NEM0 835 aa17.03■□□□□ 0.32
GYPC-205ENST00000464053 ERAP1Q9NZ08 941 aa17.03■□□□□ 0.32
GYPC-205ENST00000464053 FAM184BQ9ULE4 1060 aa17.03■□□□□ 0.32
GYPC-205ENST00000464053 K7ENM7 598 aa17.03■□□□□ 0.32
GYPC-205ENST00000464053 PPP1R37O75864 691 aa17.03■□□□□ 0.32
GYPC-205ENST00000464053 KIF20AO95235 890 aa17.03■□□□□ 0.32
GYPC-205ENST00000464053 CYBAP13498 195 aa17.03■□□□□ 0.32
GYPC-205ENST00000464053 UBASH3AP57075 661 aa17.03■□□□□ 0.32
GYPC-205ENST00000464053 TRAPPC12Q8WVT3 735 aa17.03■□□□□ 0.32
GYPC-205ENST00000464053 KIFAP3Q92845 792 aa17.03■□□□□ 0.32
GYPC-205ENST00000464053 MRFAP1L1Q96HT8 127 aa17.03■□□□□ 0.32
GYPC-205ENST00000464053 POLR3FQ9H1D9 316 aaPredicted RBP17.03■□□□□ 0.32
GYPC-205ENST00000464053 THAP9Q9H5L6 903 aa17.03■□□□□ 0.32
GYPC-205ENST00000464053 TRPC6Q9Y210 931 aa17.03■□□□□ 0.32
GYPC-205ENST00000464053 ZMYM2Q9UBW7 1377 aa17.02■□□□□ 0.32
GYPC-205ENST00000464053 A6NJR5 290 aa17.02■□□□□ 0.31
GYPC-205ENST00000464053 KCNJ18B7U540 433 aa17.02■□□□□ 0.31
GYPC-205ENST00000464053 EIF3DO15371 548 aaKnown RBP eCLIP17.02■□□□□ 0.31
GYPC-205ENST00000464053 SLC16A4O15374 487 aa17.02■□□□□ 0.31
GYPC-205ENST00000464053 MAFO75444 373 aaPredicted RBP17.02■□□□□ 0.31
GYPC-205ENST00000464053 ELNP15502 786 aa17.02■□□□□ 0.31
GYPC-205ENST00000464053 RFC5P40937 340 aa17.02■□□□□ 0.31
GYPC-205ENST00000464053 NPTX2P47972 431 aa17.02■□□□□ 0.31
GYPC-205ENST00000464053 KCNJ12Q14500 433 aa17.02■□□□□ 0.31
GYPC-205ENST00000464053 DGKDQ16760 1214 aa17.02■□□□□ 0.31
GYPC-205ENST00000464053 TCP11X2Q5H9J9 407 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms