RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	RWDD3	Q9Y3V2	267 aa		14.32	□□□□□ -0.12
FDPS-204	ENST00000461507	MAFB	Q9Y5Q3	323 aa	Predicted RBP	14.32	□□□□□ -0.12
FDPS-204	ENST00000461507		M0QZ92	97 aa		14.31	□□□□□ -0.12
FDPS-204	ENST00000461507	SLC37A4	O43826	429 aa		14.31	□□□□□ -0.12
FDPS-204	ENST00000461507	DGKI	O75912	1065 aa		14.31	□□□□□ -0.12
FDPS-204	ENST00000461507	C22orf31	O95567	290 aa		14.31	□□□□□ -0.12
FDPS-204	ENST00000461507	RB1	P06400	928 aa		14.31	□□□□□ -0.12
FDPS-204	ENST00000461507	PSAP	P07602	524 aa		14.31	□□□□□ -0.12
FDPS-204	ENST00000461507	GPM6B	Q13491	265 aa		14.31	□□□□□ -0.12
FDPS-204	ENST00000461507		Q4G0T1	1027 aa		14.31	□□□□□ -0.12
FDPS-204	ENST00000461507	RTN4RL1	Q86UN2	441 aa	Predicted RBP	14.31	□□□□□ -0.12
FDPS-204	ENST00000461507	HSCB	Q8IWL3	235 aa		14.31	□□□□□ -0.12
FDPS-204	ENST00000461507	FIBCD1	Q8N539	461 aa		14.31	□□□□□ -0.12
FDPS-204	ENST00000461507	BBX	Q8WY36	941 aa	Predicted RBP	14.31	□□□□□ -0.12
FDPS-204	ENST00000461507	NECAB3	Q96P71	396 aa	Predicted RBP	14.31	□□□□□ -0.12
FDPS-204	ENST00000461507	LMAN2L	Q9H0V9	348 aa		14.31	□□□□□ -0.12
FDPS-204	ENST00000461507	PADI3	Q9ULW8	664 aa		14.31	□□□□□ -0.12
FDPS-204	ENST00000461507	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	14.31	□□□□□ -0.12
FDPS-204	ENST00000461507	WDR64	B1ANS9	1081 aa		14.3	□□□□□ -0.12
FDPS-204	ENST00000461507	HSP90AA1	P07900	732 aa	Known RBP	14.3	□□□□□ -0.12
FDPS-204	ENST00000461507	GCFC2	P16383	781 aa	Known RBP	14.3	□□□□□ -0.12
FDPS-204	ENST00000461507	KLRC1	P26715	233 aa		14.3	□□□□□ -0.12
FDPS-204	ENST00000461507	TMEM62	Q0P6H9	643 aa		14.3	□□□□□ -0.12
FDPS-204	ENST00000461507	PAK2	Q13177	524 aa		14.3	□□□□□ -0.12
FDPS-204	ENST00000461507	LEXM	Q3ZCV2	418 aa		14.3	□□□□□ -0.12
FDPS-204	ENST00000461507	SWSAP1	Q6NVH7	229 aa		14.3	□□□□□ -0.12
FDPS-204	ENST00000461507	PDXDC2P	Q6P474	469 aa		14.3	□□□□□ -0.12
FDPS-204	ENST00000461507	MIER3	Q7Z3K6	550 aa		14.3	□□□□□ -0.12
FDPS-204	ENST00000461507	POTED	Q86YR6	584 aa		14.3	□□□□□ -0.12
FDPS-204	ENST00000461507	NPAS4	Q8IUM7	802 aa		14.3	□□□□□ -0.12
FDPS-204	ENST00000461507	CMTR2	Q8IYT2	770 aa	Known RBP	14.3	□□□□□ -0.12
FDPS-204	ENST00000461507	KIAA0319L	Q8IZA0	1049 aa		14.3	□□□□□ -0.12
FDPS-204	ENST00000461507	FBXO18	Q8NFZ0	1043 aa		14.3	□□□□□ -0.12
FDPS-204	ENST00000461507	C11orf84	Q9BUA3	381 aa	Predicted RBP	14.3	□□□□□ -0.12
FDPS-204	ENST00000461507	NOL7	Q9UMY1	257 aa	Known RBP	14.3	□□□□□ -0.12
FDPS-204	ENST00000461507	PCDHA10	Q9Y5I2	948 aa		14.3	□□□□□ -0.12
FDPS-204	ENST00000461507	BAG4	O95429	457 aa	Known RBP	14.29	□□□□□ -0.12
FDPS-204	ENST00000461507	MCM7	P33993	719 aa		14.29	□□□□□ -0.12
FDPS-204	ENST00000461507	CTNNB1	P35222	781 aa		14.29	□□□□□ -0.12
FDPS-204	ENST00000461507	BMPR1A	P36894	532 aa		14.29	□□□□□ -0.12
FDPS-204	ENST00000461507	MOXD1	Q6UVY6	613 aa		14.29	□□□□□ -0.12
FDPS-204	ENST00000461507	LINC01465	Q8N7H1	131 aa		14.29	□□□□□ -0.12
FDPS-204	ENST00000461507	BANK1	Q8NDB2	785 aa		14.29	□□□□□ -0.12
FDPS-204	ENST00000461507	NEK9	Q8TD19	979 aa		14.29	□□□□□ -0.12
FDPS-204	ENST00000461507	SLC5A5	Q92911	643 aa		14.29	□□□□□ -0.12
FDPS-204	ENST00000461507	FAM167A	Q96KS9	214 aa		14.29	□□□□□ -0.12
FDPS-204	ENST00000461507	RIT2	Q99578	217 aa		14.29	□□□□□ -0.12
FDPS-204	ENST00000461507	PLVAP	Q9BX97	442 aa		14.29	□□□□□ -0.12
FDPS-204	ENST00000461507	TMX1	Q9H3N1	280 aa		14.29	□□□□□ -0.12
FDPS-204	ENST00000461507	UNC45A	Q9H3U1	944 aa		14.29	□□□□□ -0.12
FDPS-204	ENST00000461507	NSUN3	Q9H649	340 aa	Known RBP	14.29	□□□□□ -0.12
FDPS-204	ENST00000461507	ERVK-5	Q9HDB9	667 aa		14.29	□□□□□ -0.12
FDPS-204	ENST00000461507	GABBR1	Q9UBS5	961 aa		14.29	□□□□□ -0.12
FDPS-204	ENST00000461507	CYP3A7-CYP3A51P	A0A087WV96	503 aa		14.28	□□□□□ -0.12
FDPS-204	ENST00000461507	VPS37C	A5D8V6	355 aa	Predicted RBP	14.28	□□□□□ -0.12
FDPS-204	ENST00000461507		K7ELQ4	463 aa	Predicted RBP	14.28	□□□□□ -0.12
FDPS-204	ENST00000461507	NEMF	O60524	1076 aa		14.28	□□□□□ -0.12
FDPS-204	ENST00000461507	CYP3A7	P24462	503 aa		14.28	□□□□□ -0.12
FDPS-204	ENST00000461507	JAK3	P52333	1124 aa		14.28	□□□□□ -0.12
FDPS-204	ENST00000461507	BTG3	Q14201	252 aa	Predicted RBP	14.28	□□□□□ -0.12
FDPS-204	ENST00000461507	CALCRL	Q16602	461 aa		14.28	□□□□□ -0.12
FDPS-204	ENST00000461507	LARP1B	Q659C4	914 aa	Known RBP	14.28	□□□□□ -0.12
FDPS-204	ENST00000461507	NCAPH2	Q6IBW4	605 aa		14.28	□□□□□ -0.12
FDPS-204	ENST00000461507	PPP4R3A	Q6IN85	833 aa		14.28	□□□□□ -0.12
FDPS-204	ENST00000461507	TMEM40	Q8WWA1	233 aa		14.28	□□□□□ -0.12
FDPS-204	ENST00000461507	TNFRSF25	Q93038	417 aa		14.28	□□□□□ -0.12
FDPS-204	ENST00000461507	P2RX5	Q93086	422 aa		14.28	□□□□□ -0.12
FDPS-204	ENST00000461507	PABPC5	Q96DU9	382 aa	Known RBP	14.28	□□□□□ -0.12
FDPS-204	ENST00000461507	MBOAT7	Q96N66	472 aa		14.28	□□□□□ -0.12
FDPS-204	ENST00000461507	FOXP1	Q9H334	677 aa	Predicted RBP	14.28	□□□□□ -0.12
FDPS-204	ENST00000461507	DISC1	Q9NRI5	854 aa		14.28	□□□□□ -0.12
FDPS-204	ENST00000461507	CEP131	Q9UPN4	1083 aa		14.28	□□□□□ -0.12
FDPS-204	ENST00000461507	PLXNA4	Q9HCM2	1894 aa		14.27	□□□□□ -0.12
FDPS-204	ENST00000461507	STAG3L1	P0CL83	205 aa		14.27	□□□□□ -0.13
FDPS-204	ENST00000461507	SFN	P31947	248 aa		14.27	□□□□□ -0.13
FDPS-204	ENST00000461507	NAALADL2	Q58DX5	795 aa		14.27	□□□□□ -0.13
FDPS-204	ENST00000461507	TCEAL5	Q5H9L2	206 aa		14.27	□□□□□ -0.13
FDPS-204	ENST00000461507	B3GNT9	Q6UX72	402 aa		14.27	□□□□□ -0.13
FDPS-204	ENST00000461507	NOSTRIN	Q8IVI9	506 aa		14.27	□□□□□ -0.13
FDPS-204	ENST00000461507	RDM1	Q8NG50	284 aa		14.27	□□□□□ -0.13
FDPS-204	ENST00000461507	ETNPPL	Q8TBG4	499 aa		14.27	□□□□□ -0.13
FDPS-204	ENST00000461507	NOC2L	Q9Y3T9	749 aa	Known RBP	14.27	□□□□□ -0.13
FDPS-204	ENST00000461507	MRPL42	Q9Y6G3	142 aa	Known RBP	14.27	□□□□□ -0.13
FDPS-204	ENST00000461507	GRM6	O15303	877 aa		14.26	□□□□□ -0.13
FDPS-204	ENST00000461507	MAGEB2	O15479	319 aa		14.26	□□□□□ -0.13
FDPS-204	ENST00000461507	ZNF862	O60290	1169 aa		14.26	□□□□□ -0.13
FDPS-204	ENST00000461507	MGEA5	O60502	916 aa		14.26	□□□□□ -0.13
FDPS-204	ENST00000461507	GPR32	O75388	356 aa		14.26	□□□□□ -0.13
FDPS-204	ENST00000461507	RPS6KA5	O75582	802 aa		14.26	□□□□□ -0.13
FDPS-204	ENST00000461507	PSMD10	O75832	226 aa		14.26	□□□□□ -0.13
FDPS-204	ENST00000461507	OAT	P04181	439 aa		14.26	□□□□□ -0.13
FDPS-204	ENST00000461507	KCNA5	P22460	613 aa		14.26	□□□□□ -0.13
FDPS-204	ENST00000461507	SARS	P49591	514 aa	Known RBP	14.26	□□□□□ -0.13
FDPS-204	ENST00000461507	CRYBB1	P53674	252 aa	Predicted RBP	14.26	□□□□□ -0.13
FDPS-204	ENST00000461507	ZNF174	Q15697	407 aa		14.26	□□□□□ -0.13
FDPS-204	ENST00000461507	TMEM266	Q2M3C6	531 aa		14.26	□□□□□ -0.13
FDPS-204	ENST00000461507	PUS10	Q3MIT2	529 aa	Known RBP	14.26	□□□□□ -0.13
FDPS-204	ENST00000461507	TTC38	Q5R3I4	469 aa		14.26	□□□□□ -0.13
FDPS-204	ENST00000461507	ODR4	Q5SWX8	454 aa		14.26	□□□□□ -0.13
FDPS-204	ENST00000461507	SLFN12	Q8IYM2	578 aa		14.26	□□□□□ -0.13

Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms