RNA–Protein interactions for RNA: ENST00000461098.1

HCFC1-204, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-204ENST00000461098 TNPO1Q92973 898 aaKnown RBP13.56□□□□□ -0.24
HCFC1-204ENST00000461098 NECTIN4Q96NY8 510 aa13.56□□□□□ -0.24
HCFC1-204ENST00000461098 MXRA8Q9BRK3 442 aa13.56□□□□□ -0.24
HCFC1-204ENST00000461098 TMEM117Q9H0C3 514 aa13.56□□□□□ -0.24
HCFC1-204ENST00000461098 ATP6V0A4Q9HBG4 840 aa13.56□□□□□ -0.24
HCFC1-204ENST00000461098 LY9Q9HBG7 655 aa13.56□□□□□ -0.24
HCFC1-204ENST00000461098 LIMD1Q9UGP4 676 aa13.56□□□□□ -0.24
HCFC1-204ENST00000461098 PUF60Q9UHX1 559 aaKnown RBP13.56□□□□□ -0.24
HCFC1-204ENST00000461098 GPR182O15218 404 aa13.55□□□□□ -0.24
HCFC1-204ENST00000461098 CCNE2O96020 404 aa13.55□□□□□ -0.24
HCFC1-204ENST00000461098 IGHDP01880 384 aa13.55□□□□□ -0.24
HCFC1-204ENST00000461098 ATP4AP20648 1035 aa13.55□□□□□ -0.24
HCFC1-204ENST00000461098 COL9A3Q14050 684 aaPredicted RBP13.55□□□□□ -0.24
HCFC1-204ENST00000461098 KIZQ2M2Z5 673 aa13.55□□□□□ -0.24
HCFC1-204ENST00000461098 MCTP2Q6DN12 878 aa13.55□□□□□ -0.24
HCFC1-204ENST00000461098 TMC7Q7Z402 723 aa13.55□□□□□ -0.24
HCFC1-204ENST00000461098 MB21D2Q8IYB1 491 aaPredicted RBP13.55□□□□□ -0.24
HCFC1-204ENST00000461098 ZNF654Q8IZM8 581 aa13.55□□□□□ -0.24
HCFC1-204ENST00000461098 C12orf76Q8N812 135 aaPredicted RBP13.55□□□□□ -0.24
HCFC1-204ENST00000461098 PPP1R16BQ96T49 567 aa13.55□□□□□ -0.24
HCFC1-204ENST00000461098 OSMRQ99650 979 aa13.55□□□□□ -0.24
HCFC1-204ENST00000461098 RNF216Q9NWF9 866 aaPredicted RBP13.55□□□□□ -0.24
HCFC1-204ENST00000461098 U3KPZ7 1027 aaPredicted RBP13.55□□□□□ -0.24
HCFC1-204ENST00000461098 DENND4AQ7Z401 1863 aa13.55□□□□□ -0.24
HCFC1-204ENST00000461098 hCG_1642624A0A1W2PR95 340 aa13.54□□□□□ -0.24
HCFC1-204ENST00000461098 HBP1O60381 514 aa13.54□□□□□ -0.24
HCFC1-204ENST00000461098 DDAH1O94760 285 aa13.54□□□□□ -0.24
HCFC1-204ENST00000461098 SLC26A2P50443 739 aa13.54□□□□□ -0.24
HCFC1-204ENST00000461098 CRYBB1P53674 252 aaPredicted RBP13.54□□□□□ -0.24
HCFC1-204ENST00000461098 CES5AQ6NT32 575 aa13.54□□□□□ -0.24
HCFC1-204ENST00000461098 ABHD15Q6UXT9 468 aa13.54□□□□□ -0.24
HCFC1-204ENST00000461098 SLC39A11Q8N1S5 342 aa13.54□□□□□ -0.24
HCFC1-204ENST00000461098 NCOA7Q8NI08 942 aa13.54□□□□□ -0.24
HCFC1-204ENST00000461098 ZNF558Q96NG5 402 aa13.54□□□□□ -0.24
HCFC1-204ENST00000461098 AGO4Q9HCK5 861 aaKnown RBP13.54□□□□□ -0.24
HCFC1-204ENST00000461098 SPG21Q9NZD8 308 aa13.54□□□□□ -0.24
HCFC1-204ENST00000461098 SEC63Q9UGP8 760 aaKnown RBP13.54□□□□□ -0.24
HCFC1-204ENST00000461098 EP300Q09472 2414 aaPredicted RBP13.54□□□□□ -0.24
HCFC1-204ENST00000461098 SPDYE3A6NKU9 549 aa13.53□□□□□ -0.24
HCFC1-204ENST00000461098 C22orf31O95567 290 aa13.53□□□□□ -0.24
HCFC1-204ENST00000461098 AOC1P19801 751 aa13.53□□□□□ -0.24
HCFC1-204ENST00000461098 KIF5BP33176 963 aa13.53□□□□□ -0.24
HCFC1-204ENST00000461098 PPM1AP35813 382 aa13.53□□□□□ -0.24
HCFC1-204ENST00000461098 MTHFRP42898 656 aa13.53□□□□□ -0.24
HCFC1-204ENST00000461098 KRT17Q04695 432 aa13.53□□□□□ -0.24
HCFC1-204ENST00000461098 SMC1AQ14683 1233 aaKnown RBP13.53□□□□□ -0.24
HCFC1-204ENST00000461098 SART3Q15020 963 aaKnown RBP13.53□□□□□ -0.24
HCFC1-204ENST00000461098 CLLU1OSQ5K130 101 aa13.53□□□□□ -0.24
HCFC1-204ENST00000461098 ODR4Q5SWX8 454 aa13.53□□□□□ -0.24
HCFC1-204ENST00000461098 KIAA1841Q6NSI8 718 aa13.53□□□□□ -0.24
HCFC1-204ENST00000461098 CCDC60Q8IWA6 550 aaPredicted RBP13.53□□□□□ -0.24
HCFC1-204ENST00000461098 CCDC105Q8IYK2 499 aa13.53□□□□□ -0.24
HCFC1-204ENST00000461098 CTCFLQ8NI51 663 aaPredicted RBP13.53□□□□□ -0.24
HCFC1-204ENST00000461098 LZTS2Q9BRK4 669 aa13.53□□□□□ -0.24
HCFC1-204ENST00000461098 SDF4Q9BRK5 362 aa13.53□□□□□ -0.24
HCFC1-204ENST00000461098 USTQ9Y2C2 406 aa13.53□□□□□ -0.24
HCFC1-204ENST00000461098 COL1A2P08123 1366 aa13.53□□□□□ -0.24
HCFC1-204ENST00000461098 MED19A0JLT2 244 aaPredicted RBP13.52□□□□□ -0.25
HCFC1-204ENST00000461098 MEIS1O00470 390 aa13.52□□□□□ -0.25
HCFC1-204ENST00000461098 DHX15O43143 795 aaKnown RBP13.52□□□□□ -0.25
HCFC1-204ENST00000461098 EOMESO95936 686 aa13.52□□□□□ -0.25
HCFC1-204ENST00000461098 VTNP04004 478 aa13.52□□□□□ -0.25
HCFC1-204ENST00000461098 GSPT1P15170 499 aaKnown RBP13.52□□□□□ -0.25
HCFC1-204ENST00000461098 RXRAP19793 462 aa13.52□□□□□ -0.25
HCFC1-204ENST00000461098 ANGPT1Q15389 498 aa13.52□□□□□ -0.25
HCFC1-204ENST00000461098 CEP55Q53EZ4 464 aa13.52□□□□□ -0.25
HCFC1-204ENST00000461098 ZNF484Q5JVG2 852 aa13.52□□□□□ -0.25
HCFC1-204ENST00000461098 RARS2Q5T160 578 aaKnown RBP13.52□□□□□ -0.25
HCFC1-204ENST00000461098 TYW1BQ6NUM6 668 aa13.52□□□□□ -0.25
HCFC1-204ENST00000461098 RALYLQ86SE5 291 aaKnown RBP13.52□□□□□ -0.25
HCFC1-204ENST00000461098 ECHDC2Q86YB7 292 aa13.52□□□□□ -0.25
HCFC1-204ENST00000461098 LRRC43Q8N309 656 aa13.52□□□□□ -0.25
HCFC1-204ENST00000461098 TDRD5Q8NAT2 981 aaKnown RBP13.52□□□□□ -0.25
HCFC1-204ENST00000461098 FLCNQ8NFG4 579 aa13.52□□□□□ -0.25
HCFC1-204ENST00000461098 SLC22A17Q8WUG5 538 aa13.52□□□□□ -0.25
HCFC1-204ENST00000461098 RMDN1Q96DB5 314 aa13.52□□□□□ -0.25
HCFC1-204ENST00000461098 PGBD1Q96JS3 809 aa13.52□□□□□ -0.25
HCFC1-204ENST00000461098 MFSD1Q9H3U5 465 aa13.52□□□□□ -0.25
HCFC1-204ENST00000461098 NT5C1B-RDH14C9J2C7 533 aa13.51□□□□□ -0.25
HCFC1-204ENST00000461098 CXCL14O95715 111 aa13.51□□□□□ -0.25
HCFC1-204ENST00000461098 EPCAMP16422 314 aa13.51□□□□□ -0.25
HCFC1-204ENST00000461098 ZNF598Q86UK7 904 aaKnown RBP13.51□□□□□ -0.25
HCFC1-204ENST00000461098 TMEM173Q86WV6 379 aaPredicted RBP13.51□□□□□ -0.25
HCFC1-204ENST00000461098 PLCD3Q8N3E9 789 aa13.51□□□□□ -0.25
HCFC1-204ENST00000461098 LINC01465Q8N7H1 131 aa13.51□□□□□ -0.25
HCFC1-204ENST00000461098 ADAMTS10Q9H324 1103 aa13.51□□□□□ -0.25
HCFC1-204ENST00000461098 IRAK3Q9Y616 596 aa13.51□□□□□ -0.25
HCFC1-204ENST00000461098 HOXA2O43364 376 aa13.5□□□□□ -0.25
HCFC1-204ENST00000461098 GNAQP50148 359 aa13.5□□□□□ -0.25
HCFC1-204ENST00000461098 ATAT1Q5SQI0 421 aa13.5□□□□□ -0.25
HCFC1-204ENST00000461098 SWSAP1Q6NVH7 229 aa13.5□□□□□ -0.25
HCFC1-204ENST00000461098 PDXDC2PQ6P474 469 aa13.5□□□□□ -0.25
HCFC1-204ENST00000461098 DTWD2Q8NBA8 298 aa13.5□□□□□ -0.25
HCFC1-204ENST00000461098 AUTS2Q8WXX7 1259 aa13.5□□□□□ -0.25
HCFC1-204ENST00000461098 ZBP1Q9H171 429 aa13.5□□□□□ -0.25
HCFC1-204ENST00000461098 ZNF302Q9NR11 478 aa13.5□□□□□ -0.25
HCFC1-204ENST00000461098 CYP26B1Q9NR63 512 aa13.5□□□□□ -0.25
HCFC1-204ENST00000461098 DBR1Q9UK59 544 aaKnown RBP13.5□□□□□ -0.25
HCFC1-204ENST00000461098 MAFBQ9Y5Q3 323 aaPredicted RBP13.5□□□□□ -0.25
HCFC1-204ENST00000461098 C2orf16Q68DN1 1984 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms