RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 IFFO1Q0D2I5 559 aa15.32■□□□□ 0.04
SMARCA4-204ENST00000444061 KNOP1Q1ED39 458 aaKnown RBP15.32■□□□□ 0.04
SMARCA4-204ENST00000444061 PLA2G4FQ68DD2 849 aa15.32■□□□□ 0.04
SMARCA4-204ENST00000444061 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.32■□□□□ 0.04
SMARCA4-204ENST00000444061 RGPD2P0DJD1 1756 aa15.32■□□□□ 0.04
SMARCA4-204ENST00000444061 ADKP55263 362 aaKnown RBP15.32■□□□□ 0.04
SMARCA4-204ENST00000444061 RIOX2Q8IUF8 465 aa15.32■□□□□ 0.04
SMARCA4-204ENST00000444061 FMR1NBQ8N0W7 255 aaPredicted RBP15.32■□□□□ 0.04
SMARCA4-204ENST00000444061 AGXT2Q9BYV1 514 aa15.32■□□□□ 0.04
SMARCA4-204ENST00000444061 GCNT4Q9P109 453 aa15.32■□□□□ 0.04
SMARCA4-204ENST00000444061 ASTN2O75129 1339 aaPredicted RBP15.32■□□□□ 0.04
SMARCA4-204ENST00000444061 ABCB4P21439 1286 aa15.32■□□□□ 0.04
SMARCA4-204ENST00000444061 NSFP46459 744 aaKnown RBP15.32■□□□□ 0.04
SMARCA4-204ENST00000444061 UBL4BQ8N7F7 174 aa15.32■□□□□ 0.04
SMARCA4-204ENST00000444061 TYW1Q9NV66 732 aaKnown RBP15.32■□□□□ 0.04
SMARCA4-204ENST00000444061 C11orf57Q6ZUT1 292 aaPredicted RBP15.31■□□□□ 0.04
SMARCA4-204ENST00000444061 ARMCX2Q7L311 632 aa15.31■□□□□ 0.04
SMARCA4-204ENST00000444061 A1CFQ9NQ94 594 aaKnown RBP15.31■□□□□ 0.04
SMARCA4-204ENST00000444061 ANKEF1Q9NU02 776 aa15.31■□□□□ 0.04
SMARCA4-204ENST00000444061 DOT1LQ8TEK3 1739 aa15.31■□□□□ 0.04
SMARCA4-204ENST00000444061 DCDC2CA8MYV0 355 aa15.31■□□□□ 0.04
SMARCA4-204ENST00000444061 RPS6KA5O75582 802 aa15.31■□□□□ 0.04
SMARCA4-204ENST00000444061 OATP04181 439 aa15.31■□□□□ 0.04
SMARCA4-204ENST00000444061 RSRC2Q7L4I2 434 aaKnown RBP15.31■□□□□ 0.04
SMARCA4-204ENST00000444061 IFIH1Q9BYX4 1025 aaKnown RBP15.31■□□□□ 0.04
SMARCA4-204ENST00000444061 FAM170AA1A519 330 aa15.31■□□□□ 0.04
SMARCA4-204ENST00000444061 USP2O75604 605 aaPredicted RBP15.31■□□□□ 0.04
SMARCA4-204ENST00000444061 ARP10275 920 aa15.31■□□□□ 0.04
SMARCA4-204ENST00000444061 TGFB3P10600 412 aa15.31■□□□□ 0.04
SMARCA4-204ENST00000444061 TAL1P17542 331 aaPredicted RBP15.31■□□□□ 0.04
SMARCA4-204ENST00000444061 NOLC1Q14978 699 aaKnown RBP eCLIP15.31■□□□□ 0.04
SMARCA4-204ENST00000444061 EFCAB12Q6NXP0 572 aa15.31■□□□□ 0.04
SMARCA4-204ENST00000444061 SLC30A10Q6XR72 485 aa15.31■□□□□ 0.04
SMARCA4-204ENST00000444061 KCND2Q9NZV8 630 aa15.31■□□□□ 0.04
SMARCA4-204ENST00000444061 C17orf102A2RUQ5 167 aa15.31■□□□□ 0.04
SMARCA4-204ENST00000444061 CD58P19256 250 aa15.31■□□□□ 0.04
SMARCA4-204ENST00000444061 FXR2P51116 673 aaKnown RBP eCLIP15.31■□□□□ 0.045e-7■■■□□ 19.1
SMARCA4-204ENST00000444061 EVCP57679 992 aa15.31■□□□□ 0.04
SMARCA4-204ENST00000444061 TMEM62Q0P6H9 643 aa15.31■□□□□ 0.04
SMARCA4-204ENST00000444061 NAALADL2Q58DX5 795 aa15.31■□□□□ 0.04
SMARCA4-204ENST00000444061 CYP4F22Q6NT55 531 aa15.31■□□□□ 0.04
SMARCA4-204ENST00000444061 FBXL16Q8N461 479 aa15.31■□□□□ 0.04
SMARCA4-204ENST00000444061 CAPNS2Q96L46 248 aa15.31■□□□□ 0.04
SMARCA4-204ENST00000444061 GOLPH3LQ9H4A5 285 aa15.31■□□□□ 0.04
SMARCA4-204ENST00000444061 HMX1Q9NP08 348 aaPredicted RBP15.31■□□□□ 0.04
SMARCA4-204ENST00000444061 ATP8B3O60423 1300 aa15.3■□□□□ 0.04
SMARCA4-204ENST00000444061 FKTNO75072 461 aa15.3■□□□□ 0.04
SMARCA4-204ENST00000444061 AKR1A1P14550 325 aa15.3■□□□□ 0.04
SMARCA4-204ENST00000444061 FERP16591 822 aa15.3■□□□□ 0.04
SMARCA4-204ENST00000444061 NTRK3Q16288 839 aa15.3■□□□□ 0.04
SMARCA4-204ENST00000444061 KCTD17Q8N5Z5 321 aa15.3■□□□□ 0.04
SMARCA4-204ENST00000444061 VTA1Q9NP79 307 aa15.3■□□□□ 0.04
SMARCA4-204ENST00000444061 COMMD10Q9Y6G5 202 aa15.3■□□□□ 0.04
SMARCA4-204ENST00000444061 MYPNQ86TC9 1320 aa15.3■□□□□ 0.04
SMARCA4-204ENST00000444061 THAP12O43422 761 aa15.3■□□□□ 0.04
SMARCA4-204ENST00000444061 LRRN2O75325 713 aa15.3■□□□□ 0.04
SMARCA4-204ENST00000444061 SCARA5Q6ZMJ2 495 aa15.3■□□□□ 0.04
SMARCA4-204ENST00000444061 LRRC71Q8N4P6 559 aa15.3■□□□□ 0.04
SMARCA4-204ENST00000444061 SECISBP2LQ93073 1101 aaKnown RBP15.3■□□□□ 0.04
SMARCA4-204ENST00000444061 SAMSN1Q9NSI8 373 aaKnown RBP15.3■□□□□ 0.04
SMARCA4-204ENST00000444061 CACNA1FO60840 1977 aa15.3■□□□□ 0.04
SMARCA4-204ENST00000444061 ALDH5A1P51649 535 aaPredicted RBP15.3■□□□□ 0.04
SMARCA4-204ENST00000444061 GPC3P51654 580 aa15.3■□□□□ 0.04
SMARCA4-204ENST00000444061 KYAT1Q16773 422 aa15.3■□□□□ 0.04
SMARCA4-204ENST00000444061 SND1Q7KZF4 910 aaKnown RBP eCLIP15.3■□□□□ 0.04
SMARCA4-204ENST00000444061 OR6B3Q8NGW1 331 aa15.3■□□□□ 0.04
SMARCA4-204ENST00000444061 AFG1LQ8WV93 481 aa15.3■□□□□ 0.04
SMARCA4-204ENST00000444061 RANBP17Q9H2T7 1088 aaKnown RBP15.3■□□□□ 0.04
SMARCA4-204ENST00000444061 SLC37A4O43826 429 aa15.29■□□□□ 0.04
SMARCA4-204ENST00000444061 NPEPPSP55786 919 aa15.29■□□□□ 0.04
SMARCA4-204ENST00000444061 RNASE9P60153 205 aaKnown RBP15.29■□□□□ 0.04
SMARCA4-204ENST00000444061 CNTN2Q02246 1040 aa15.29■□□□□ 0.04
SMARCA4-204ENST00000444061 METTL7BQ6UX53 244 aa15.29■□□□□ 0.04
SMARCA4-204ENST00000444061 GUF1Q8N442 669 aaKnown RBP15.29■□□□□ 0.04
SMARCA4-204ENST00000444061 FAM149B1Q96BN6 582 aa15.29■□□□□ 0.04
SMARCA4-204ENST00000444061 CAPZA3Q96KX2 299 aa15.29■□□□□ 0.04
SMARCA4-204ENST00000444061 UBE2TQ9NPD8 197 aaPredicted RBP15.29■□□□□ 0.04
SMARCA4-204ENST00000444061 STARD7Q9NQZ5 370 aa15.29■□□□□ 0.04
SMARCA4-204ENST00000444061 ZDHHC9Q9Y397 364 aa15.29■□□□□ 0.04
SMARCA4-204ENST00000444061 KPNA6O60684 536 aa15.29■□□□□ 0.04
SMARCA4-204ENST00000444061 PGM5Q15124 567 aa15.29■□□□□ 0.04
SMARCA4-204ENST00000444061 REM2Q8IYK8 340 aaPredicted RBP15.29■□□□□ 0.04
SMARCA4-204ENST00000444061 KRT222Q8N1A0 295 aa15.29■□□□□ 0.04
SMARCA4-204ENST00000444061 TRIM9Q9C026 710 aa15.29■□□□□ 0.04
SMARCA4-204ENST00000444061 UNC45AQ9H3U1 944 aa15.29■□□□□ 0.04
SMARCA4-204ENST00000444061 AGO2Q9UKV8 859 aaKnown RBP15.29■□□□□ 0.04
SMARCA4-204ENST00000444061 ZBTB48P10074 688 aaPredicted RBP15.29■□□□□ 0.04
SMARCA4-204ENST00000444061 THEM5Q8N1Q8 247 aa15.29■□□□□ 0.04
SMARCA4-204ENST00000444061 NAP1L3Q99457 506 aaPredicted RBP15.29■□□□□ 0.04
SMARCA4-204ENST00000444061 NDST4Q9H3R1 872 aa15.29■□□□□ 0.04
SMARCA4-204ENST00000444061 NMT1P30419 496 aaKnown RBP15.29■□□□□ 0.04
SMARCA4-204ENST00000444061 SCYL2Q6P3W7 929 aa15.29■□□□□ 0.04
SMARCA4-204ENST00000444061 RNF208Q9H0X6 261 aa15.29■□□□□ 0.04
SMARCA4-204ENST00000444061 LRRC4Q9HBW1 653 aa15.29■□□□□ 0.04
SMARCA4-204ENST00000444061 GOLGA6L7A0A1B0GV03 622 aa15.28■□□□□ 0.04
SMARCA4-204ENST00000444061 ATP2A1O14983 1001 aa15.28■□□□□ 0.04
SMARCA4-204ENST00000444061 HUS1O60921 280 aa15.28■□□□□ 0.04
SMARCA4-204ENST00000444061 SUPT20HL2P0C7V6 817 aa15.28■□□□□ 0.04
SMARCA4-204ENST00000444061 SEMA3FQ13275 785 aa15.28■□□□□ 0.04
SMARCA4-204ENST00000444061 SYCE1Q8N0S2 351 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms