RNA–Protein interactions for RNA: ENST00000443528.5

ACTB-206, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 569 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-206ENST00000443528 AKT3Q9Y243 479 aa17.59■□□□□ 0.41
ACTB-206ENST00000443528 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.58■□□□□ 0.4
ACTB-206ENST00000443528 LAD1O00515 517 aa17.58■□□□□ 0.4
ACTB-206ENST00000443528 CD52P31358 61 aa17.58■□□□□ 0.4
ACTB-206ENST00000443528 PRPHP41219 470 aa17.58■□□□□ 0.4
ACTB-206ENST00000443528 KCNJ6P48051 423 aa17.58■□□□□ 0.4
ACTB-206ENST00000443528 ATP2C1P98194 919 aaPredicted RBP17.58■□□□□ 0.4
ACTB-206ENST00000443528 RESTQ13127 1097 aa17.58■□□□□ 0.4
ACTB-206ENST00000443528 PDIA5Q14554 519 aa17.58■□□□□ 0.4
ACTB-206ENST00000443528 TMEM266Q2M3C6 531 aa17.58■□□□□ 0.4
ACTB-206ENST00000443528 OTUD6AQ7L8S5 288 aa17.58■□□□□ 0.4
ACTB-206ENST00000443528 TMCO2Q7Z6W1 182 aaPredicted RBP17.58■□□□□ 0.4
ACTB-206ENST00000443528 HERC6Q8IVU3 1022 aa17.58■□□□□ 0.4
ACTB-206ENST00000443528 IGSF22Q8N9C0 903 aa17.58■□□□□ 0.4
ACTB-206ENST00000443528 USP38Q8NB14 1042 aa17.58■□□□□ 0.4
ACTB-206ENST00000443528 MAP7D2Q96T17 732 aa17.58■□□□□ 0.4
ACTB-206ENST00000443528 POLR3CQ9BUI4 534 aaPredicted RBP17.58■□□□□ 0.4
ACTB-206ENST00000443528 ADAMTS10Q9H324 1103 aa17.58■□□□□ 0.4
ACTB-206ENST00000443528 TUFT1Q9NNX1 390 aa17.58■□□□□ 0.4
ACTB-206ENST00000443528 MTMR6Q9Y217 621 aa17.58■□□□□ 0.4
ACTB-206ENST00000443528 GINS2Q9Y248 185 aa17.58■□□□□ 0.4
ACTB-206ENST00000443528 YBX2Q9Y2T7 364 aaKnown RBP17.58■□□□□ 0.4
ACTB-206ENST00000443528 PPME1Q9Y570 386 aa17.58■□□□□ 0.4
ACTB-206ENST00000443528 CHD9Q3L8U1 2897 aa17.58■□□□□ 0.4
ACTB-206ENST00000443528 EVPLQ92817 2033 aa17.57■□□□□ 0.4
ACTB-206ENST00000443528 A0A087WWV3 80 aa17.57■□□□□ 0.4
ACTB-206ENST00000443528 MYOGP15173 224 aa17.57■□□□□ 0.4
ACTB-206ENST00000443528 RPA1P27694 616 aa17.57■□□□□ 0.4
ACTB-206ENST00000443528 CRYBB1P53674 252 aaPredicted RBP17.57■□□□□ 0.4
ACTB-206ENST00000443528 NLRP11P59045 1033 aaKnown RBP17.57■□□□□ 0.4
ACTB-206ENST00000443528 XKR9Q5GH70 373 aa17.57■□□□□ 0.4
ACTB-206ENST00000443528 DEFB123Q8N688 67 aa17.57■□□□□ 0.4
ACTB-206ENST00000443528 PIGOQ8TEQ8 1089 aa17.57■□□□□ 0.4
ACTB-206ENST00000443528 OSMRQ99650 979 aa17.57■□□□□ 0.4
ACTB-206ENST00000443528 TTYH1Q9H313 450 aaPredicted RBP17.57■□□□□ 0.4
ACTB-206ENST00000443528 DHX33Q9H6R0 707 aaKnown RBP17.57■□□□□ 0.4
ACTB-206ENST00000443528 ANKEF1Q9NU02 776 aa17.57■□□□□ 0.4
ACTB-206ENST00000443528 LRWD1Q9UFC0 647 aa17.57■□□□□ 0.4
ACTB-206ENST00000443528 PADI3Q9ULW8 664 aa17.57■□□□□ 0.4
ACTB-206ENST00000443528 NOC2LQ9Y3T9 749 aaKnown RBP17.57■□□□□ 0.4
ACTB-206ENST00000443528 STX6O43752 255 aa17.56■□□□□ 0.4
ACTB-206ENST00000443528 RFC5P40937 340 aa17.56■□□□□ 0.4
ACTB-206ENST00000443528 GPC3P51654 580 aa17.56■□□□□ 0.4
ACTB-206ENST00000443528 RAB30Q15771 203 aa17.56■□□□□ 0.4
ACTB-206ENST00000443528 ECM1Q16610 540 aa17.56■□□□□ 0.4
ACTB-206ENST00000443528 DTHD1Q6ZMT9 781 aa17.56■□□□□ 0.4
ACTB-206ENST00000443528 ERMNQ8TAM6 284 aa17.56■□□□□ 0.4
ACTB-206ENST00000443528 LINC01599Q8WXQ3 324 aa17.56■□□□□ 0.4
ACTB-206ENST00000443528 TIFAQ96CG3 184 aa17.56■□□□□ 0.4
ACTB-206ENST00000443528 ZNF668Q96K58 619 aaPredicted RBP17.56■□□□□ 0.4
ACTB-206ENST00000443528 ERVK-5Q9HDB9 667 aa17.56■□□□□ 0.4
ACTB-206ENST00000443528 MSRAQ9UJ68 235 aa17.56■□□□□ 0.4
ACTB-206ENST00000443528 PCDHA11Q9Y5I1 949 aa17.56■□□□□ 0.4
ACTB-206ENST00000443528 PTPRSQ13332 1948 aa17.55■□□□□ 0.4
ACTB-206ENST00000443528 PP2D1A8MPX8 630 aa17.55■□□□□ 0.4
ACTB-206ENST00000443528 ENPP3O14638 875 aa17.55■□□□□ 0.4
ACTB-206ENST00000443528 XRCC6P12956 609 aaKnown RBP eCLIP17.55■□□□□ 0.44e-22■□□□□ 8.8
ACTB-206ENST00000443528 RARRES1P49788 294 aa17.55■□□□□ 0.4
ACTB-206ENST00000443528 DNM2P50570 870 aa17.55■□□□□ 0.4
ACTB-206ENST00000443528 POLGP54098 1239 aaPredicted RBP17.55■□□□□ 0.4
ACTB-206ENST00000443528 PAK2Q13177 524 aa17.55■□□□□ 0.4
ACTB-206ENST00000443528 ZNF697Q5TEC3 545 aa17.55■□□□□ 0.4
ACTB-206ENST00000443528 FAM173BQ6P4H8 233 aa17.55■□□□□ 0.4
ACTB-206ENST00000443528 POTEGQ6S5H5 508 aa17.55■□□□□ 0.4
ACTB-206ENST00000443528 RTN4RL1Q86UN2 441 aaPredicted RBP17.55■□□□□ 0.4
ACTB-206ENST00000443528 SLC7A3Q8WY07 619 aa17.55■□□□□ 0.4
ACTB-206ENST00000443528 JPH2Q9BR39 696 aaPredicted RBP17.55■□□□□ 0.4
ACTB-206ENST00000443528 NKX2-4Q9H2Z4 354 aa17.55■□□□□ 0.4
ACTB-206ENST00000443528 TMX1Q9H3N1 280 aa17.55■□□□□ 0.4
ACTB-206ENST00000443528 SEMA6BQ9H3T3 888 aa17.55■□□□□ 0.4
ACTB-206ENST00000443528 XPNPEP1Q9NQW7 623 aa17.55■□□□□ 0.4
ACTB-206ENST00000443528 BMP2KQ9NSY1 1161 aaPredicted RBP17.55■□□□□ 0.4
ACTB-206ENST00000443528 SUCLA2Q9P2R7 463 aaPredicted RBP17.55■□□□□ 0.4
ACTB-206ENST00000443528 TMEM265A0A087WTH1 108 aa17.54■□□□□ 0.4
ACTB-206ENST00000443528 RPS6KA5O75582 802 aa17.54■□□□□ 0.4
ACTB-206ENST00000443528 GJB5O95377 273 aa17.54■□□□□ 0.4
ACTB-206ENST00000443528 AMHP03971 560 aa17.54■□□□□ 0.4
ACTB-206ENST00000443528 CDC25AP30304 524 aa17.54■□□□□ 0.4
ACTB-206ENST00000443528 EMC2Q15006 297 aa17.54■□□□□ 0.4
ACTB-206ENST00000443528 FAM228AQ86W67 206 aa17.54■□□□□ 0.4
ACTB-206ENST00000443528 EXOC8Q8IYI6 725 aa17.54■□□□□ 0.4
ACTB-206ENST00000443528 MYOCDQ8IZQ8 938 aa17.54■□□□□ 0.4
ACTB-206ENST00000443528 ZNF710Q8N1W2 664 aa17.54■□□□□ 0.4
ACTB-206ENST00000443528 SPRYD3Q8NCJ5 442 aa17.54■□□□□ 0.4
ACTB-206ENST00000443528 TOP1MTQ969P6 601 aa17.54■□□□□ 0.4
ACTB-206ENST00000443528 TMEM143Q96AN5 459 aa17.54■□□□□ 0.4
ACTB-206ENST00000443528 FAM161BQ96MY7 647 aa17.54■□□□□ 0.4
ACTB-206ENST00000443528 MMTAG2Q9BU76 263 aaKnown RBP17.54■□□□□ 0.4
ACTB-206ENST00000443528 MTMR10Q9NXD2 777 aa17.54■□□□□ 0.4
ACTB-206ENST00000443528 ST3GAL5Q9UNP4 418 aa17.54■□□□□ 0.4
ACTB-206ENST00000443528 MICAL3Q7RTP6 2002 aa17.54■□□□□ 0.4
ACTB-206ENST00000443528 HSP90AA1P07900 732 aaKnown RBP17.53■□□□□ 0.4
ACTB-206ENST00000443528 MUTP22033 750 aa17.53■□□□□ 0.4
ACTB-206ENST00000443528 EIF4BP23588 611 aaKnown RBP17.53■□□□□ 0.4
ACTB-206ENST00000443528 CCT6AP40227 531 aaKnown RBP17.53■□□□□ 0.4
ACTB-206ENST00000443528 NFX1Q12986 1120 aaKnown RBP17.53■□□□□ 0.4
ACTB-206ENST00000443528 SF3A1Q15459 793 aaKnown RBP17.53■□□□□ 0.4
ACTB-206ENST00000443528 ARL6IP4Q66PJ3 421 aaKnown RBP17.53■□□□□ 0.4
ACTB-206ENST00000443528 HAUS3Q68CZ6 603 aa17.53■□□□□ 0.4
ACTB-206ENST00000443528 FAM117BQ6P1L5 589 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms