RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 SLC4A7Q9Y6M7 1214 aa13.2□□□□□ -0.3
HSPG2-206ENST00000439717 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.19□□□□□ -0.3
HSPG2-206ENST00000439717 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.19□□□□□ -0.3
HSPG2-206ENST00000439717 ZBBXA8MT70 800 aa13.19□□□□□ -0.3
HSPG2-206ENST00000439717 GPR32O75388 356 aa13.19□□□□□ -0.3
HSPG2-206ENST00000439717 ZSCAN22P10073 491 aaPredicted RBP13.19□□□□□ -0.3
HSPG2-206ENST00000439717 GHRP10912 638 aa13.19□□□□□ -0.3
HSPG2-206ENST00000439717 CCT6AP40227 531 aaKnown RBP13.19□□□□□ -0.3
HSPG2-206ENST00000439717 CRYBB1P53674 252 aaPredicted RBP13.19□□□□□ -0.3
HSPG2-206ENST00000439717 POLGP54098 1239 aaPredicted RBP13.19□□□□□ -0.3
HSPG2-206ENST00000439717 LPIN1Q14693 890 aa13.19□□□□□ -0.3
HSPG2-206ENST00000439717 ODR4Q5SWX8 454 aa13.19□□□□□ -0.3
HSPG2-206ENST00000439717 KRT79Q5XKE5 535 aa13.19□□□□□ -0.3
HSPG2-206ENST00000439717 LRRC71Q8N4P6 559 aa13.19□□□□□ -0.3
HSPG2-206ENST00000439717 KCTD17Q8N5Z5 321 aa13.19□□□□□ -0.3
HSPG2-206ENST00000439717 ZNF579Q8NAF0 562 aaKnown RBP13.19□□□□□ -0.3
HSPG2-206ENST00000439717 DBF4BQ8NFT6 615 aa13.19□□□□□ -0.3
HSPG2-206ENST00000439717 CCDC43Q96MW1 224 aaKnown RBP13.19□□□□□ -0.3
HSPG2-206ENST00000439717 SH2D3AQ9BRG2 576 aa13.19□□□□□ -0.3
HSPG2-206ENST00000439717 IFIH1Q9BYX4 1025 aaKnown RBP13.19□□□□□ -0.3
HSPG2-206ENST00000439717 CXXC1Q9P0U4 656 aaPredicted RBP13.19□□□□□ -0.3
HSPG2-206ENST00000439717 DBR1Q9UK59 544 aaKnown RBP13.19□□□□□ -0.3
HSPG2-206ENST00000439717 MORC2Q9Y6X9 1032 aaPredicted RBP13.19□□□□□ -0.3
HSPG2-206ENST00000439717 VWA3AA6NCI4 1184 aa13.18□□□□□ -0.3
HSPG2-206ENST00000439717 ZBTB39O15060 712 aa13.18□□□□□ -0.3
HSPG2-206ENST00000439717 SLC26A4O43511 780 aa13.18□□□□□ -0.3
HSPG2-206ENST00000439717 DGAT1O75907 488 aa13.18□□□□□ -0.3
HSPG2-206ENST00000439717 VTNP04004 478 aa13.18□□□□□ -0.3
HSPG2-206ENST00000439717 KCNJ6P48051 423 aa13.18□□□□□ -0.3
HSPG2-206ENST00000439717 RARRES1P49788 294 aa13.18□□□□□ -0.3
HSPG2-206ENST00000439717 FXR1P51114 621 aaKnown RBP eCLIP13.18□□□□□ -0.3
HSPG2-206ENST00000439717 NLRP11P59045 1033 aaKnown RBP13.18□□□□□ -0.3
HSPG2-206ENST00000439717 MKRN4PQ13434 485 aaPredicted RBP13.18□□□□□ -0.3
HSPG2-206ENST00000439717 PTPAQ15257 358 aa13.18□□□□□ -0.3
HSPG2-206ENST00000439717 KIZQ2M2Z5 673 aa13.18□□□□□ -0.3
HSPG2-206ENST00000439717 GPR153Q6NV75 609 aa13.18□□□□□ -0.3
HSPG2-206ENST00000439717 FAM173BQ6P4H8 233 aa13.18□□□□□ -0.3
HSPG2-206ENST00000439717 POTEGQ6S5H5 508 aa13.18□□□□□ -0.3
HSPG2-206ENST00000439717 SNX29Q8TEQ0 813 aa13.18□□□□□ -0.3
HSPG2-206ENST00000439717 PIGOQ8TEQ8 1089 aa13.18□□□□□ -0.3
HSPG2-206ENST00000439717 TCP11Q8WWU5 503 aa13.18□□□□□ -0.3
HSPG2-206ENST00000439717 ZNF396Q96N95 335 aaPredicted RBP13.18□□□□□ -0.3
HSPG2-206ENST00000439717 SLC9A7Q96T83 725 aa13.18□□□□□ -0.3
HSPG2-206ENST00000439717 OSBPL7Q9BZF2 842 aa13.18□□□□□ -0.3
HSPG2-206ENST00000439717 ADAMTS10Q9H324 1103 aa13.18□□□□□ -0.3
HSPG2-206ENST00000439717 SUCLA2Q9P2R7 463 aaPredicted RBP13.18□□□□□ -0.3
HSPG2-206ENST00000439717 CLIC4Q9Y696 253 aa13.18□□□□□ -0.3
HSPG2-206ENST00000439717 F13A1P00488 732 aa13.17□□□□□ -0.3
HSPG2-206ENST00000439717 ATP2A2P16615 1042 aaKnown RBP13.17□□□□□ -0.3
HSPG2-206ENST00000439717 LONP1P36776 959 aaKnown RBP13.17□□□□□ -0.3
HSPG2-206ENST00000439717 GPC3P51654 580 aa13.17□□□□□ -0.3
HSPG2-206ENST00000439717 WDR5P61964 334 aaKnown RBP13.17□□□□□ -0.3
HSPG2-206ENST00000439717 PAK2Q13177 524 aa13.17□□□□□ -0.3
HSPG2-206ENST00000439717 EMC2Q15006 297 aa13.17□□□□□ -0.3
HSPG2-206ENST00000439717 TCTN1Q2MV58 587 aa13.17□□□□□ -0.3
HSPG2-206ENST00000439717 HYIQ5T013 277 aa13.17□□□□□ -0.3
HSPG2-206ENST00000439717 ZNF410Q86VK4 478 aa13.17□□□□□ -0.3
HSPG2-206ENST00000439717 MTRQ99707 1265 aa13.17□□□□□ -0.3
HSPG2-206ENST00000439717 FTHL17Q9BXU8 183 aa13.17□□□□□ -0.3
HSPG2-206ENST00000439717 AGO3Q9H9G7 860 aaKnown RBP13.17□□□□□ -0.3
HSPG2-206ENST00000439717 CDHR5Q9HBB8 845 aa13.17□□□□□ -0.3
HSPG2-206ENST00000439717 ATP6V0A4Q9HBG4 840 aa13.17□□□□□ -0.3
HSPG2-206ENST00000439717 KIAA1024Q9UPX6 916 aa13.17□□□□□ -0.3
HSPG2-206ENST00000439717 GINS2Q9Y248 185 aa13.17□□□□□ -0.3
HSPG2-206ENST00000439717 SIP14410 1827 aa13.16□□□□□ -0.3
HSPG2-206ENST00000439717 PP2D1A8MPX8 630 aa13.16□□□□□ -0.3
HSPG2-206ENST00000439717 SOX1O00570 391 aaPredicted RBP13.16□□□□□ -0.3
HSPG2-206ENST00000439717 GPR182O15218 404 aa13.16□□□□□ -0.3
HSPG2-206ENST00000439717 ASAP2O43150 1006 aa13.16□□□□□ -0.3
HSPG2-206ENST00000439717 RPS6KA5O75582 802 aa13.16□□□□□ -0.3
HSPG2-206ENST00000439717 AMHP03971 560 aa13.16□□□□□ -0.3
HSPG2-206ENST00000439717 CD52P31358 61 aa13.16□□□□□ -0.3
HSPG2-206ENST00000439717 DRP2Q13474 957 aa13.16□□□□□ -0.3
HSPG2-206ENST00000439717 SLC39A14Q15043 492 aa13.16□□□□□ -0.3
HSPG2-206ENST00000439717 ECM1Q16610 540 aa13.16□□□□□ -0.3
HSPG2-206ENST00000439717 ATL3Q6DD88 541 aa13.16□□□□□ -0.3
HSPG2-206ENST00000439717 PSPC1Q8WXF1 523 aaKnown RBP13.16□□□□□ -0.3
HSPG2-206ENST00000439717 USP28Q96RU2 1077 aa13.16□□□□□ -0.3
HSPG2-206ENST00000439717 OSMRQ99650 979 aa13.16□□□□□ -0.3
HSPG2-206ENST00000439717 MMTAG2Q9BU76 263 aaKnown RBP13.16□□□□□ -0.3
HSPG2-206ENST00000439717 NT5C3AQ9H0P0 336 aa13.16□□□□□ -0.3
HSPG2-206ENST00000439717 DDX19AQ9NUU7 478 aaKnown RBP13.16□□□□□ -0.3
HSPG2-206ENST00000439717 PADI3Q9ULW8 664 aa13.16□□□□□ -0.3
HSPG2-206ENST00000439717 DNM3Q9UQ16 869 aa13.16□□□□□ -0.3
HSPG2-206ENST00000439717 SRPRBQ9Y5M8 271 aaKnown RBP13.16□□□□□ -0.3
HSPG2-206ENST00000439717 EVPLQ92817 2033 aa13.15□□□□□ -0.3
HSPG2-206ENST00000439717 TRIOBPQ9H2D6 2365 aa13.15□□□□□ -0.3
HSPG2-206ENST00000439717 TET1Q8NFU7 2136 aa13.15□□□□□ -0.3
HSPG2-206ENST00000439717 ARHGEF35A5YM69 484 aa13.15□□□□□ -0.3
HSPG2-206ENST00000439717 EYA4O95677 639 aa13.15□□□□□ -0.3
HSPG2-206ENST00000439717 DARSP14868 501 aaKnown RBP13.15□□□□□ -0.3
HSPG2-206ENST00000439717 EIF4BP23588 611 aaKnown RBP13.15□□□□□ -0.3
HSPG2-206ENST00000439717 CDC25AP30304 524 aa13.15□□□□□ -0.3
HSPG2-206ENST00000439717 UBA7P41226 1012 aa13.15□□□□□ -0.3
HSPG2-206ENST00000439717 NASPP49321 788 aaPredicted RBP13.15□□□□□ -0.3
HSPG2-206ENST00000439717 PKP1Q13835 747 aa13.15□□□□□ -0.3
HSPG2-206ENST00000439717 MXD4Q14582 209 aaPredicted RBP13.15□□□□□ -0.3
HSPG2-206ENST00000439717 RAB30Q15771 203 aa13.15□□□□□ -0.3
HSPG2-206ENST00000439717 FAM109BQ6ICB4 259 aaPredicted RBP13.15□□□□□ -0.3
HSPG2-206ENST00000439717 RHPN2Q8IUC4 686 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms