RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 MYBP10242 640 aa8.82□□□□□ -1
VTI1A-202ENST00000432306 TGFB3P10600 412 aa8.82□□□□□ -1
VTI1A-202ENST00000432306 RBP3P10745 1247 aa8.82□□□□□ -1
VTI1A-202ENST00000432306 CASP1P29466 404 aa8.82□□□□□ -1
VTI1A-202ENST00000432306 PEX19P40855 299 aa8.82□□□□□ -1
VTI1A-202ENST00000432306 MDH1P40925 334 aaKnown RBP8.82□□□□□ -1
VTI1A-202ENST00000432306 CDKN1CP49918 316 aaPredicted RBP8.82□□□□□ -1
VTI1A-202ENST00000432306 C2orf54Q08AI8 447 aa8.82□□□□□ -1
VTI1A-202ENST00000432306 PAK2Q13177 524 aa8.82□□□□□ -1
VTI1A-202ENST00000432306 MTA1Q13330 715 aa8.82□□□□□ -1
VTI1A-202ENST00000432306 ASTE1Q2TB18 679 aaPredicted RBP8.82□□□□□ -1
VTI1A-202ENST00000432306 LACTB2Q53H82 288 aaPredicted RBP8.82□□□□□ -1
VTI1A-202ENST00000432306 TBC1D9BQ66K14 1250 aa8.82□□□□□ -1
VTI1A-202ENST00000432306 ANKRD23Q86SG2 305 aa8.82□□□□□ -1
VTI1A-202ENST00000432306 FAM114A1Q8IWE2 563 aa8.82□□□□□ -1
VTI1A-202ENST00000432306 IFT20Q8IY31 132 aa8.82□□□□□ -1
VTI1A-202ENST00000432306 CNBD1Q8NA66 436 aa8.82□□□□□ -1
VTI1A-202ENST00000432306 MYCBPAPQ8TBZ2 947 aa8.82□□□□□ -1
VTI1A-202ENST00000432306 ZNF473Q8WTR7 871 aaKnown RBP8.82□□□□□ -1
VTI1A-202ENST00000432306 RRP36Q96EU6 259 aaKnown RBP8.82□□□□□ -1
VTI1A-202ENST00000432306 ALS2CR12Q96Q35 445 aa8.82□□□□□ -1
VTI1A-202ENST00000432306 RUFY1Q96T51 708 aa8.82□□□□□ -1
VTI1A-202ENST00000432306 NACAP1Q9BZK3 213 aa8.82□□□□□ -1
VTI1A-202ENST00000432306 CCSER1Q9C0I3 900 aa8.82□□□□□ -1
VTI1A-202ENST00000432306 RNF19AQ9NV58 838 aa8.82□□□□□ -1
VTI1A-202ENST00000432306 VPS54Q9P1Q0 977 aa8.82□□□□□ -1
VTI1A-202ENST00000432306 DNMT3AQ9Y6K1 912 aaPredicted RBP8.82□□□□□ -1
VTI1A-202ENST00000432306 ZNF233A6NK53 670 aa8.81□□□□□ -1
VTI1A-202ENST00000432306 WNT7AO00755 349 aa8.81□□□□□ -1
VTI1A-202ENST00000432306 PSMA7O14818 248 aa8.81□□□□□ -1
VTI1A-202ENST00000432306 DDAH1O94760 285 aa8.81□□□□□ -1
VTI1A-202ENST00000432306 APPP05067 770 aa8.81□□□□□ -1
VTI1A-202ENST00000432306 RRM1P23921 792 aa8.81□□□□□ -1
VTI1A-202ENST00000432306 CCNE1P24864 410 aa8.81□□□□□ -1
VTI1A-202ENST00000432306 ATICP31939 592 aa8.81□□□□□ -1
VTI1A-202ENST00000432306 HSPA9P38646 679 aaKnown RBP8.81□□□□□ -1
VTI1A-202ENST00000432306 BCAMP50895 628 aa8.81□□□□□ -1
VTI1A-202ENST00000432306 IFFO1Q0D2I5 559 aa8.81□□□□□ -1
VTI1A-202ENST00000432306 ITGB3BPQ13352 177 aaPredicted RBP8.81□□□□□ -1
VTI1A-202ENST00000432306 OCLNQ16625 522 aa8.81□□□□□ -1
VTI1A-202ENST00000432306 HSP90AB3PQ58FF7 597 aa8.81□□□□□ -1
VTI1A-202ENST00000432306 MORN1Q5T089 497 aa8.81□□□□□ -1
VTI1A-202ENST00000432306 MAP1SQ66K74 1059 aaPredicted RBP8.81□□□□□ -1
VTI1A-202ENST00000432306 KRT26Q7Z3Y9 468 aa8.81□□□□□ -1
VTI1A-202ENST00000432306 EGFL6Q8IUX8 553 aa8.81□□□□□ -1
VTI1A-202ENST00000432306 GSPT2Q8IYD1 628 aaKnown RBP8.81□□□□□ -1
VTI1A-202ENST00000432306 DEPDC4Q8N2C3 294 aa8.81□□□□□ -1
VTI1A-202ENST00000432306 HDAC7Q8WUI4 952 aa8.81□□□□□ -1
VTI1A-202ENST00000432306 LPIN2Q92539 896 aa8.81□□□□□ -1
VTI1A-202ENST00000432306 CAPZA3Q96KX2 299 aa8.81□□□□□ -1
VTI1A-202ENST00000432306 CAPNS2Q96L46 248 aa8.81□□□□□ -1
VTI1A-202ENST00000432306 ATP6V1G3Q96LB4 118 aa8.81□□□□□ -1
VTI1A-202ENST00000432306 SETDB2Q96T68 719 aa8.81□□□□□ -1
VTI1A-202ENST00000432306 SRA1Q9HD15 236 aaKnown RBP8.81□□□□□ -1
VTI1A-202ENST00000432306 DISC1Q9NRI5 854 aa8.81□□□□□ -1
VTI1A-202ENST00000432306 KLC4Q9NSK0 619 aa8.81□□□□□ -1
VTI1A-202ENST00000432306 ACAD8Q9UKU7 415 aa8.81□□□□□ -1
VTI1A-202ENST00000432306 ATP8A1Q9Y2Q0 1164 aa8.81□□□□□ -1
VTI1A-202ENST00000432306 ATP8B3O60423 1300 aa8.81□□□□□ -1
VTI1A-202ENST00000432306 ZNF541Q9H0D2 1346 aa8.81□□□□□ -1
VTI1A-202ENST00000432306 SOWAHBA6NEL2 793 aa8.8□□□□□ -1
VTI1A-202ENST00000432306 C6orf229H3BNL8 230 aa8.8□□□□□ -1
VTI1A-202ENST00000432306 CA12O43570 354 aa8.8□□□□□ -1
VTI1A-202ENST00000432306 NR1D1P20393 614 aa8.8□□□□□ -1
VTI1A-202ENST00000432306 ELF1P32519 619 aa8.8□□□□□ -1
VTI1A-202ENST00000432306 PAFAH1B1P43034 410 aa8.8□□□□□ -1
VTI1A-202ENST00000432306 PMS1P54277 932 aaKnown RBP8.8□□□□□ -1
VTI1A-202ENST00000432306 TROAPQ12815 778 aa8.8□□□□□ -1
VTI1A-202ENST00000432306 MAP3K12Q12852 859 aa8.8□□□□□ -1
VTI1A-202ENST00000432306 PDCLQ13371 301 aa8.8□□□□□ -1
VTI1A-202ENST00000432306 CRYMQ14894 314 aa8.8□□□□□ -1
VTI1A-202ENST00000432306 SPA17Q15506 151 aa8.8□□□□□ -1
VTI1A-202ENST00000432306 IL17AQ16552 155 aa8.8□□□□□ -1
VTI1A-202ENST00000432306 CCDC40Q4G0X9 1142 aa8.8□□□□□ -1
VTI1A-202ENST00000432306 MIIPQ5JXC2 388 aa8.8□□□□□ -1
VTI1A-202ENST00000432306 METTL24Q5JXM2 366 aa8.8□□□□□ -1
VTI1A-202ENST00000432306 PDXDC1Q6P996 788 aa8.8□□□□□ -1
VTI1A-202ENST00000432306 TMTC3Q6ZXV5 915 aa8.8□□□□□ -1
VTI1A-202ENST00000432306 ANKK1Q8NFD2 765 aa8.8□□□□□ -1
VTI1A-202ENST00000432306 GPR101Q96P66 508 aaPredicted RBP8.8□□□□□ -1
VTI1A-202ENST00000432306 CCT8L2Q96SF2 557 aa8.8□□□□□ -1
VTI1A-202ENST00000432306 TUBGCP2Q9BSJ2 902 aa8.8□□□□□ -1
VTI1A-202ENST00000432306 TLR10Q9BXR5 811 aa8.8□□□□□ -1
VTI1A-202ENST00000432306 SEZ6LQ9BYH1 1024 aa8.8□□□□□ -1
VTI1A-202ENST00000432306 KRTAP3-3Q9BYR6 98 aa8.8□□□□□ -1
VTI1A-202ENST00000432306 KRTAP3-2Q9BYR7 98 aa8.8□□□□□ -1
VTI1A-202ENST00000432306 PTPRHQ9HD43 1115 aa8.8□□□□□ -1
VTI1A-202ENST00000432306 PLCB1Q9NQ66 1216 aa8.8□□□□□ -1
VTI1A-202ENST00000432306 AGPAT5Q9NUQ2 364 aa8.8□□□□□ -1
VTI1A-202ENST00000432306 SLC12A6Q9UHW9 1150 aa8.8□□□□□ -1
VTI1A-202ENST00000432306 TMEM59LQ9UK28 342 aa8.8□□□□□ -1
VTI1A-202ENST00000432306 SUFUQ9UMX1 484 aa8.8□□□□□ -1
VTI1A-202ENST00000432306 GDAQ9Y2T3 454 aa8.8□□□□□ -1
VTI1A-202ENST00000432306 CAPN6Q9Y6Q1 641 aa8.8□□□□□ -1
VTI1A-202ENST00000432306 MYO1FO00160 1098 aa8.8□□□□□ -1
VTI1A-202ENST00000432306 LAD1O00515 517 aa8.8□□□□□ -1
VTI1A-202ENST00000432306 IDH1O75874 414 aaKnown RBP8.8□□□□□ -1
VTI1A-202ENST00000432306 MBD4O95243 580 aa8.8□□□□□ -1
VTI1A-202ENST00000432306 GHRP10912 638 aa8.8□□□□□ -1
VTI1A-202ENST00000432306 TRIM21P19474 475 aaKnown RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms