RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 DSC3Q14574 896 aa19.33■□□□□ 0.68
CPSF4-203ENST00000430038 Q4G0T1 1027 aa19.33■□□□□ 0.68
CPSF4-203ENST00000430038 CMTR2Q8IYT2 770 aaKnown RBP19.33■□□□□ 0.68
CPSF4-203ENST00000430038 SPPL3Q8TCT6 385 aa19.33■□□□□ 0.68
CPSF4-203ENST00000430038 MBOAT7Q96N66 472 aa19.33■□□□□ 0.68
CPSF4-203ENST00000430038 SH2D3AQ9BRG2 576 aa19.33■□□□□ 0.68
CPSF4-203ENST00000430038 NSUN3Q9H649 340 aaKnown RBP19.33■□□□□ 0.68
CPSF4-203ENST00000430038 RGS18Q9NS28 235 aa19.33■□□□□ 0.68
CPSF4-203ENST00000430038 TPCN1Q9ULQ1 816 aa19.33■□□□□ 0.68
CPSF4-203ENST00000430038 SAMM50Q9Y512 469 aa19.33■□□□□ 0.68
CPSF4-203ENST00000430038 GRXCR2A6NFK2 248 aa19.32■□□□□ 0.68
CPSF4-203ENST00000430038 WDR64B1ANS9 1081 aa19.32■□□□□ 0.68
CPSF4-203ENST00000430038 LINC01565O15544 149 aa19.32■□□□□ 0.68
CPSF4-203ENST00000430038 DEXIO95424 95 aa19.32■□□□□ 0.68
CPSF4-203ENST00000430038 COL9A1P20849 921 aa19.32■□□□□ 0.68
CPSF4-203ENST00000430038 SARSP49591 514 aaKnown RBP19.32■□□□□ 0.68
CPSF4-203ENST00000430038 CRYBB1P53674 252 aaPredicted RBP19.32■□□□□ 0.68
CPSF4-203ENST00000430038 CTC1Q2NKJ3 1217 aa19.32■□□□□ 0.68
CPSF4-203ENST00000430038 TIGD5Q53EQ6 642 aa19.32■□□□□ 0.68
CPSF4-203ENST00000430038 EFCAB12Q6NXP0 572 aa19.32■□□□□ 0.68
CPSF4-203ENST00000430038 FAM178BQ8IXR5 827 aa19.32■□□□□ 0.68
CPSF4-203ENST00000430038 KLHL23Q8NBE8 558 aa19.32■□□□□ 0.68
CPSF4-203ENST00000430038 DAGLBQ8NCG7 672 aa19.32■□□□□ 0.68
CPSF4-203ENST00000430038 ETNPPLQ8TBG4 499 aa19.32■□□□□ 0.68
CPSF4-203ENST00000430038 PABPC5Q96DU9 382 aaKnown RBP19.32■□□□□ 0.68
CPSF4-203ENST00000430038 RIT2Q99578 217 aa19.32■□□□□ 0.68
CPSF4-203ENST00000430038 PCDHGC5Q9Y5F6 944 aa19.32■□□□□ 0.68
CPSF4-203ENST00000430038 SLC37A4O43826 429 aa19.31■□□□□ 0.68
CPSF4-203ENST00000430038 OATP04181 439 aa19.31■□□□□ 0.68
CPSF4-203ENST00000430038 NLRP11P59045 1033 aaKnown RBP19.31■□□□□ 0.68
CPSF4-203ENST00000430038 FAM189BP81408 668 aa19.31■□□□□ 0.68
CPSF4-203ENST00000430038 PRKCEQ02156 737 aa19.31■□□□□ 0.68
CPSF4-203ENST00000430038 TARBP2Q15633 366 aaKnown RBP19.31■□□□□ 0.68
CPSF4-203ENST00000430038 LRCH2Q5VUJ6 765 aa19.31■□□□□ 0.68
CPSF4-203ENST00000430038 PTCRAQ6ISU1 281 aaPredicted RBP19.31■□□□□ 0.68
CPSF4-203ENST00000430038 ADGRD2Q7Z7M1 963 aa19.31■□□□□ 0.68
CPSF4-203ENST00000430038 TRIM22Q8IYM9 498 aa19.31■□□□□ 0.68
CPSF4-203ENST00000430038 OXER1Q8TDS5 423 aa19.31■□□□□ 0.68
CPSF4-203ENST00000430038 C11orf84Q9BUA3 381 aaPredicted RBP19.31■□□□□ 0.68
CPSF4-203ENST00000430038 C11orf16Q9NQ32 467 aa19.31■□□□□ 0.68
CPSF4-203ENST00000430038 RNF19AQ9NV58 838 aa19.31■□□□□ 0.68
CPSF4-203ENST00000430038 CPLX1O14810 134 aa19.3■□□□□ 0.68
CPSF4-203ENST00000430038 GAS7O60861 476 aa19.3■□□□□ 0.68
CPSF4-203ENST00000430038 CSDE1O75534 798 aaKnown RBP19.3■□□□□ 0.68
CPSF4-203ENST00000430038 MMP1P03956 469 aa19.3■□□□□ 0.68
CPSF4-203ENST00000430038 FGFR1P11362 822 aa19.3■□□□□ 0.68
CPSF4-203ENST00000430038 FGFR4P22455 802 aa19.3■□□□□ 0.68
CPSF4-203ENST00000430038 INF2Q27J81 1249 aa19.3■□□□□ 0.68
CPSF4-203ENST00000430038 EARS2Q5JPH6 523 aaKnown RBP19.3■□□□□ 0.68
CPSF4-203ENST00000430038 PHF20Q9BVI0 1012 aa19.3■□□□□ 0.68
CPSF4-203ENST00000430038 TEKT3Q9BXF9 490 aa19.3■□□□□ 0.68
CPSF4-203ENST00000430038 CLDND1Q9NY35 253 aa19.3■□□□□ 0.68
CPSF4-203ENST00000430038 EML1O00423 815 aa19.29■□□□□ 0.68
CPSF4-203ENST00000430038 LARGE1O95461 756 aa19.29■□□□□ 0.68
CPSF4-203ENST00000430038 STAG3L1P0CL83 205 aa19.29■□□□□ 0.68
CPSF4-203ENST00000430038 FDPSP14324 419 aaKnown RBP19.29■□□□□ 0.68
CPSF4-203ENST00000430038 LRRC55Q6ZSA7 311 aa19.29■□□□□ 0.68
CPSF4-203ENST00000430038 EP400NLQ6ZTU2 488 aa19.29■□□□□ 0.68
CPSF4-203ENST00000430038 SLC24A5Q71RS6 500 aa19.29■□□□□ 0.68
CPSF4-203ENST00000430038 P2RX5Q93086 422 aa19.29■□□□□ 0.68
CPSF4-203ENST00000430038 PLVAPQ9BX97 442 aa19.29■□□□□ 0.68
CPSF4-203ENST00000430038 LMAN2LQ9H0V9 348 aa19.29■□□□□ 0.68
CPSF4-203ENST00000430038 RWDD3Q9Y3V2 267 aa19.29■□□□□ 0.68
CPSF4-203ENST00000430038 PCDHB7Q9Y5E2 793 aa19.29■□□□□ 0.68
CPSF4-203ENST00000430038 FAM205CA6NFA0 338 aa19.28■□□□□ 0.68
CPSF4-203ENST00000430038 GPR182O15218 404 aa19.28■□□□□ 0.68
CPSF4-203ENST00000430038 MAGEB2O15479 319 aa19.28■□□□□ 0.68
CPSF4-203ENST00000430038 PFKFB2O60825 505 aa19.28■□□□□ 0.68
CPSF4-203ENST00000430038 TBX10O75333 385 aa19.28■□□□□ 0.68
CPSF4-203ENST00000430038 GPC3P51654 580 aa19.28■□□□□ 0.68
CPSF4-203ENST00000430038 CLUL1Q15846 466 aa19.28■□□□□ 0.68
CPSF4-203ENST00000430038 POF1BQ8WVV4 589 aa19.28■□□□□ 0.68
CPSF4-203ENST00000430038 IGFLR1Q9H665 355 aa19.28■□□□□ 0.68
CPSF4-203ENST00000430038 CWH43Q9H720 699 aa19.28■□□□□ 0.68
CPSF4-203ENST00000430038 NRBP2Q9NSY0 501 aa19.28■□□□□ 0.68
CPSF4-203ENST00000430038 TYW1Q9NV66 732 aaKnown RBP19.28■□□□□ 0.68
CPSF4-203ENST00000430038 LRFN2Q9ULH4 789 aa19.28■□□□□ 0.68
CPSF4-203ENST00000430038 AKT3Q9Y243 479 aa19.28■□□□□ 0.68
CPSF4-203ENST00000430038 TRIOO75962 3097 aa19.27■□□□□ 0.68
CPSF4-203ENST00000430038 DENND3A2RUS2 1198 aa19.27■□□□□ 0.68
CPSF4-203ENST00000430038 TBKBP1A7MCY6 615 aa19.27■□□□□ 0.68
CPSF4-203ENST00000430038 SEC24BO95487 1268 aa19.27■□□□□ 0.68
CPSF4-203ENST00000430038 JAK3P52333 1124 aa19.27■□□□□ 0.68
CPSF4-203ENST00000430038 AK2P54819 239 aa19.27■□□□□ 0.68
CPSF4-203ENST00000430038 MIER3Q7Z3K6 550 aa19.27■□□□□ 0.68
CPSF4-203ENST00000430038 NECAB1Q8N987 351 aa19.27■□□□□ 0.68
CPSF4-203ENST00000430038 ZNF579Q8NAF0 562 aaKnown RBP19.27■□□□□ 0.68
CPSF4-203ENST00000430038 FAM167AQ96KS9 214 aa19.27■□□□□ 0.68
CPSF4-203ENST00000430038 NIFKQ9BYG3 293 aaKnown RBP19.27■□□□□ 0.68
CPSF4-203ENST00000430038 PPP4R2Q9NY27 417 aa19.27■□□□□ 0.68
CPSF4-203ENST00000430038 WRAP73Q9P2S5 460 aaPredicted RBP19.27■□□□□ 0.68
CPSF4-203ENST00000430038 CEP131Q9UPN4 1083 aa19.27■□□□□ 0.68
CPSF4-203ENST00000430038 IGKV6-21A0A0C4DH24 114 aa19.26■□□□□ 0.67
CPSF4-203ENST00000430038 EIF4BP23588 611 aaKnown RBP19.26■□□□□ 0.67
CPSF4-203ENST00000430038 SFNP31947 248 aa19.26■□□□□ 0.67
CPSF4-203ENST00000430038 RBM10P98175 930 aaKnown RBP19.26■□□□□ 0.67
CPSF4-203ENST00000430038 ADAM15Q13444 863 aa19.26■□□□□ 0.67
CPSF4-203ENST00000430038 NONOQ15233 471 aaKnown RBP eCLIP19.26■□□□□ 0.67
CPSF4-203ENST00000430038 LETM2Q2VYF4 491 aa19.26■□□□□ 0.67
CPSF4-203ENST00000430038 MTERF2Q49AM1 385 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms