RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 CD248Q9HCU0 757 aa5.24□□□□□ -1.57
HMGB3P23-201ENST00000414981 CDC42EP3Q9UKI2 254 aa5.24□□□□□ -1.57
HMGB3P23-201ENST00000414981 VWA7Q9Y334 891 aa5.24□□□□□ -1.57
HMGB3P23-201ENST00000414981 PMS2P1A4D2B8 440 aa5.23□□□□□ -1.57
HMGB3P23-201ENST00000414981 C1QTNF3-AMACRE9PGA6 284 aa5.23□□□□□ -1.57
HMGB3P23-201ENST00000414981 GAS7O60861 476 aa5.23□□□□□ -1.57
HMGB3P23-201ENST00000414981 PRLP01236 227 aa5.23□□□□□ -1.57
HMGB3P23-201ENST00000414981 ATP2A2P16615 1042 aaKnown RBP5.23□□□□□ -1.57
HMGB3P23-201ENST00000414981 MEOX1P50221 254 aa5.23□□□□□ -1.57
HMGB3P23-201ENST00000414981 KRTAP10-2P60368 255 aa5.23□□□□□ -1.57
HMGB3P23-201ENST00000414981 RNF151Q2KHN1 245 aa5.23□□□□□ -1.57
HMGB3P23-201ENST00000414981 TTC38Q5R3I4 469 aa5.23□□□□□ -1.57
HMGB3P23-201ENST00000414981 CREB3L3Q68CJ9 461 aa5.23□□□□□ -1.57
HMGB3P23-201ENST00000414981 CNNM4Q6P4Q7 775 aa5.23□□□□□ -1.57
HMGB3P23-201ENST00000414981 TAX1BP1Q86VP1 789 aa5.23□□□□□ -1.57
HMGB3P23-201ENST00000414981 ZZZ3Q8IYH5 903 aa5.23□□□□□ -1.57
HMGB3P23-201ENST00000414981 PPM1KQ8N3J5 372 aa5.23□□□□□ -1.57
HMGB3P23-201ENST00000414981 DVL3Q92997 716 aaPredicted RBP5.23□□□□□ -1.57
HMGB3P23-201ENST00000414981 C8orf49Q96NF6 230 aa5.23□□□□□ -1.57
HMGB3P23-201ENST00000414981 PUS7Q96PZ0 661 aaKnown RBP5.23□□□□□ -1.57
HMGB3P23-201ENST00000414981 ELF4Q99607 663 aaPredicted RBP5.23□□□□□ -1.57
HMGB3P23-201ENST00000414981 SEMA4AQ9H3S1 761 aa5.23□□□□□ -1.57
HMGB3P23-201ENST00000414981 OXSMQ9NWU1 459 aa5.23□□□□□ -1.57
HMGB3P23-201ENST00000414981 USP35Q9P2H5 1018 aa5.23□□□□□ -1.57
HMGB3P23-201ENST00000414981 MYRFQ9Y2G1 1151 aa5.23□□□□□ -1.57
HMGB3P23-201ENST00000414981 TBX22Q9Y458 520 aa5.23□□□□□ -1.57
HMGB3P23-201ENST00000414981 UBA6A0AVT1 1052 aaPredicted RBP5.22□□□□□ -1.57
HMGB3P23-201ENST00000414981 ARHGAP6O43182 974 aa5.22□□□□□ -1.57
HMGB3P23-201ENST00000414981 ZNF623O75123 536 aa5.22□□□□□ -1.57
HMGB3P23-201ENST00000414981 HMGB1P09429 215 aaKnown RBP5.22□□□□□ -1.57
HMGB3P23-201ENST00000414981 SLC9A1P19634 815 aa5.22□□□□□ -1.57
HMGB3P23-201ENST00000414981 CR2P20023 1033 aa5.22□□□□□ -1.57
HMGB3P23-201ENST00000414981 PTX3P26022 381 aaPredicted RBP5.22□□□□□ -1.57
HMGB3P23-201ENST00000414981 RRADP55042 308 aa5.22□□□□□ -1.57
HMGB3P23-201ENST00000414981 SESN2P58004 480 aaPredicted RBP5.22□□□□□ -1.57
HMGB3P23-201ENST00000414981 SLC6A3Q01959 620 aa5.22□□□□□ -1.57
HMGB3P23-201ENST00000414981 DSG1Q02413 1049 aa5.22□□□□□ -1.57
HMGB3P23-201ENST00000414981 LRRC32Q14392 662 aa5.22□□□□□ -1.57
HMGB3P23-201ENST00000414981 ICAM4Q14773 271 aa5.22□□□□□ -1.57
HMGB3P23-201ENST00000414981 PCOLCEQ15113 449 aa5.22□□□□□ -1.57
HMGB3P23-201ENST00000414981 ZXDCQ2QGD7 858 aaPredicted RBP5.22□□□□□ -1.57
HMGB3P23-201ENST00000414981 PLEKHG4Q58EX7 1191 aa5.22□□□□□ -1.57
HMGB3P23-201ENST00000414981 LCE5AQ5TCM9 118 aa5.22□□□□□ -1.57
HMGB3P23-201ENST00000414981 AGBL4Q5VU57 503 aa5.22□□□□□ -1.57
HMGB3P23-201ENST00000414981 PASD1Q8IV76 773 aa5.22□□□□□ -1.57
HMGB3P23-201ENST00000414981 DHX37Q8IY37 1157 aaKnown RBP5.22□□□□□ -1.57
HMGB3P23-201ENST00000414981 RTKN2Q8IZC4 609 aa5.22□□□□□ -1.57
HMGB3P23-201ENST00000414981 BCL6BQ8N143 479 aaPredicted RBP5.22□□□□□ -1.57
HMGB3P23-201ENST00000414981 LPPQ93052 612 aa5.22□□□□□ -1.57
HMGB3P23-201ENST00000414981 MFSD3Q96ES6 412 aa5.22□□□□□ -1.57
HMGB3P23-201ENST00000414981 KRTAP3-1Q9BYR8 98 aa5.22□□□□□ -1.57
HMGB3P23-201ENST00000414981 OR10A2Q9H208 303 aa5.22□□□□□ -1.57
HMGB3P23-201ENST00000414981 SAE1Q9UBE0 346 aaPredicted RBP5.22□□□□□ -1.57
HMGB3P23-201ENST00000414981 NR2E1Q9Y466 385 aa5.22□□□□□ -1.57
HMGB3P23-201ENST00000414981 CCDC180Q9P1Z9 1646 aa5.22□□□□□ -1.57
HMGB3P23-201ENST00000414981 MAFGO15525 162 aa5.21□□□□□ -1.58
HMGB3P23-201ENST00000414981 KPNA6O60684 536 aa5.21□□□□□ -1.58
HMGB3P23-201ENST00000414981 ZNF20P17024 532 aa5.21□□□□□ -1.58
HMGB3P23-201ENST00000414981 MRE11P49959 708 aa5.21□□□□□ -1.58
HMGB3P23-201ENST00000414981 SCNN1BP51168 640 aa5.21□□□□□ -1.58
HMGB3P23-201ENST00000414981 BCAR1P56945 870 aa5.21□□□□□ -1.58
HMGB3P23-201ENST00000414981 NOLC1Q14978 699 aaKnown RBP eCLIP5.21□□□□□ -1.58
HMGB3P23-201ENST00000414981 PCBP1Q15365 356 aaKnown RBP eCLIP5.21□□□□□ -1.58
HMGB3P23-201ENST00000414981 TBR1Q16650 682 aa5.21□□□□□ -1.58
HMGB3P23-201ENST00000414981 DGKDQ16760 1214 aa5.21□□□□□ -1.58
HMGB3P23-201ENST00000414981 SLFN12LQ6IEE8 588 aa5.21□□□□□ -1.58
HMGB3P23-201ENST00000414981 TIGD7Q6NT04 549 aaPredicted RBP5.21□□□□□ -1.58
HMGB3P23-201ENST00000414981 TCTN3Q6NUS6 607 aa5.21□□□□□ -1.58
HMGB3P23-201ENST00000414981 KANSL1Q7Z3B3 1105 aa5.21□□□□□ -1.58
HMGB3P23-201ENST00000414981 FILIP1Q7Z7B0 1213 aa5.21□□□□□ -1.58
HMGB3P23-201ENST00000414981 PHYKPLQ8IUZ5 450 aa5.21□□□□□ -1.58
HMGB3P23-201ENST00000414981 NXPE1Q8N323 547 aa5.21□□□□□ -1.58
HMGB3P23-201ENST00000414981 EFHBQ8N7U6 833 aa5.21□□□□□ -1.58
HMGB3P23-201ENST00000414981 Q8TCH9 128 aa5.21□□□□□ -1.58
HMGB3P23-201ENST00000414981 TUBGCP5Q96RT8 1024 aa5.21□□□□□ -1.58
HMGB3P23-201ENST00000414981 CDK5RAP1Q96SZ6 601 aaKnown RBP5.21□□□□□ -1.58
HMGB3P23-201ENST00000414981 DEF6Q9H4E7 631 aa5.21□□□□□ -1.58
HMGB3P23-201ENST00000414981 KCMF1Q9P0J7 381 aa5.21□□□□□ -1.58
HMGB3P23-201ENST00000414981 PUF60Q9UHX1 559 aaKnown RBP5.21□□□□□ -1.58
HMGB3P23-201ENST00000414981 ST6GALNAC2Q9UJ37 374 aa5.21□□□□□ -1.58
HMGB3P23-201ENST00000414981 ZFR2Q9UPR6 939 aaKnown RBP5.21□□□□□ -1.58
HMGB3P23-201ENST00000414981 MATN2O00339 956 aa5.2□□□□□ -1.58
HMGB3P23-201ENST00000414981 H2AFYO75367 372 aaKnown RBP5.2□□□□□ -1.58
HMGB3P23-201ENST00000414981 RPS19P39019 145 aaKnown RBP5.2□□□□□ -1.58
HMGB3P23-201ENST00000414981 RGS3P49796 1198 aa5.2□□□□□ -1.58
HMGB3P23-201ENST00000414981 SMAD3P84022 425 aaKnown RBP5.2□□□□□ -1.58
HMGB3P23-201ENST00000414981 OCRLQ01968 901 aa5.2□□□□□ -1.58
HMGB3P23-201ENST00000414981 TAF7LQ5H9L4 462 aa5.2□□□□□ -1.58
HMGB3P23-201ENST00000414981 GPR158Q5T848 1215 aa5.2□□□□□ -1.58
HMGB3P23-201ENST00000414981 KLHDC10Q6PID8 442 aa5.2□□□□□ -1.58
HMGB3P23-201ENST00000414981 GIMAP8Q8ND71 665 aaPredicted RBP5.2□□□□□ -1.58
HMGB3P23-201ENST00000414981 CFHR4Q92496 578 aa5.2□□□□□ -1.58
HMGB3P23-201ENST00000414981 GFM2Q969S9 779 aaKnown RBP5.2□□□□□ -1.58
HMGB3P23-201ENST00000414981 WWC2-AS2Q96NR7 200 aa5.2□□□□□ -1.58
HMGB3P23-201ENST00000414981 GNRHR2Q96P88 292 aa5.2□□□□□ -1.58
HMGB3P23-201ENST00000414981 LRRC37BQ96QE4 947 aa5.2□□□□□ -1.58
HMGB3P23-201ENST00000414981 TARS2Q9BW92 718 aaKnown RBP5.2□□□□□ -1.58
HMGB3P23-201ENST00000414981 KLC2Q9H0B6 622 aa5.2□□□□□ -1.58
HMGB3P23-201ENST00000414981 NELFAQ9H3P2 528 aa5.2□□□□□ -1.58
HMGB3P23-201ENST00000414981 TOMM22Q9NS69 142 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms