RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 ZMYND8Q9ULU4 1186 aaPredicted RBP34.07■■■■□ 3.04
CSNK1E-206ENST00000413574 IGKV6-21A0A0C4DH24 114 aa34.06■■■■□ 3.04
CSNK1E-206ENST00000413574 SMIM35A0A1B0GVV1 85 aa34.06■■■■□ 3.04
CSNK1E-206ENST00000413574 SSBP05455 408 aaKnown RBP eCLIP34.06■■■■□ 3.04
CSNK1E-206ENST00000413574 CMA1P23946 247 aa34.06■■■■□ 3.04
CSNK1E-206ENST00000413574 THPOP40225 353 aa34.06■■■■□ 3.04
CSNK1E-206ENST00000413574 NAALADL2Q58DX5 795 aa34.06■■■■□ 3.04
CSNK1E-206ENST00000413574 TAF2Q6P1X5 1199 aa34.06■■■■□ 3.04
CSNK1E-206ENST00000413574 PADI6Q6TGC4 694 aa34.06■■■■□ 3.04
CSNK1E-206ENST00000413574 KIAA0319LQ8IZA0 1049 aa34.06■■■■□ 3.04
CSNK1E-206ENST00000413574 LINC01465Q8N7H1 131 aa34.06■■■■□ 3.04
CSNK1E-206ENST00000413574 SLC7A3Q8WY07 619 aa34.06■■■■□ 3.04
CSNK1E-206ENST00000413574 FAM13BQ9NYF5 915 aa34.06■■■■□ 3.04
CSNK1E-206ENST00000413574 PLA2G4BP0C869 781 aa34.05■■■■□ 3.04
CSNK1E-206ENST00000413574 CYP2C18P33260 490 aa34.05■■■■□ 3.04
CSNK1E-206ENST00000413574 TMEM62Q0P6H9 643 aa34.05■■■■□ 3.04
CSNK1E-206ENST00000413574 DHX8Q14562 1220 aaKnown RBP34.05■■■■□ 3.04
CSNK1E-206ENST00000413574 EMC2Q15006 297 aa34.05■■■■□ 3.04
CSNK1E-206ENST00000413574 MAEAQ7L5Y9 396 aa34.05■■■■□ 3.04
CSNK1E-206ENST00000413574 RETREG2Q8NC44 543 aa34.05■■■■□ 3.04
CSNK1E-206ENST00000413574 RAD54LQ92698 747 aa34.05■■■■□ 3.04
CSNK1E-206ENST00000413574 XPNPEP1Q9NQW7 623 aa34.05■■■■□ 3.04
CSNK1E-206ENST00000413574 KIAA0355O15063 1070 aa34.04■■■■□ 3.04
CSNK1E-206ENST00000413574 RFC5P40937 340 aa34.04■■■■□ 3.04
CSNK1E-206ENST00000413574 MCM6Q14566 821 aa34.04■■■■□ 3.04
CSNK1E-206ENST00000413574 PPME1Q9Y570 386 aa34.04■■■■□ 3.04
CSNK1E-206ENST00000413574 CTSHP09668 335 aa34.04■■■■□ 3.04
CSNK1E-206ENST00000413574 CKBP12277 381 aa34.04■■■■□ 3.04
CSNK1E-206ENST00000413574 PFKFB1P16118 471 aa34.04■■■■□ 3.04
CSNK1E-206ENST00000413574 SLC12A3P55017 1021 aa34.04■■■■□ 3.04
CSNK1E-206ENST00000413574 CCDC73Q6ZRK6 1079 aa34.04■■■■□ 3.04
CSNK1E-206ENST00000413574 KCTD17Q8N5Z5 321 aa34.04■■■■□ 3.04
CSNK1E-206ENST00000413574 TMEM143Q96AN5 459 aa34.04■■■■□ 3.04
CSNK1E-206ENST00000413574 POLD4Q9HCU8 107 aa34.04■■■■□ 3.04
CSNK1E-206ENST00000413574 A0A1W2PQ27 194 aa34.03■■■■□ 3.04
CSNK1E-206ENST00000413574 A0A1W2PQ64 194 aa34.03■■■■□ 3.04
CSNK1E-206ENST00000413574 A0A1W2PQD8 194 aa34.03■■■■□ 3.04
CSNK1E-206ENST00000413574 POLR2DO15514 142 aaKnown RBP34.03■■■■□ 3.04
CSNK1E-206ENST00000413574 DGAT1O75907 488 aa34.03■■■■□ 3.04
CSNK1E-206ENST00000413574 VTNP04004 478 aa34.03■■■■□ 3.04
CSNK1E-206ENST00000413574 STAT6P42226 847 aa34.03■■■■□ 3.04
CSNK1E-206ENST00000413574 ZNF618Q5T7W0 954 aa34.03■■■■□ 3.04
CSNK1E-206ENST00000413574 SYT2Q8N9I0 419 aaPredicted RBP34.03■■■■□ 3.04
CSNK1E-206ENST00000413574 DHX58Q96C10 678 aa34.03■■■■□ 3.04
CSNK1E-206ENST00000413574 RUSC1Q9BVN2 902 aa34.03■■■■□ 3.04
CSNK1E-206ENST00000413574 GOLPH3LQ9H4A5 285 aa34.03■■■■□ 3.04
CSNK1E-206ENST00000413574 ATP6V0A4Q9HBG4 840 aa34.03■■■■□ 3.04
CSNK1E-206ENST00000413574 PRKAG2Q9UGJ0 569 aa34.03■■■■□ 3.04
CSNK1E-206ENST00000413574 KCNH3Q9ULD8 1083 aa34.03■■■■□ 3.04
CSNK1E-206ENST00000413574 SIP14410 1827 aa34.02■■■■□ 3.04
CSNK1E-206ENST00000413574 GADD45BO75293 160 aaPredicted RBP34.02■■■■□ 3.04
CSNK1E-206ENST00000413574 E2F4Q16254 413 aa34.02■■■■□ 3.04
CSNK1E-206ENST00000413574 FSIP1Q8NA03 581 aa34.02■■■■□ 3.04
CSNK1E-206ENST00000413574 CAGE1Q8TC20 777 aa34.02■■■■□ 3.04
CSNK1E-206ENST00000413574 LARP4BQ92615 738 aaKnown RBP34.02■■■■□ 3.04
CSNK1E-206ENST00000413574 PPP1R16BQ96T49 567 aa34.02■■■■□ 3.04
CSNK1E-206ENST00000413574 MTRQ99707 1265 aa34.02■■■■□ 3.04
CSNK1E-206ENST00000413574 SCN5AQ14524 2016 aa34.02■■■■□ 3.04
CSNK1E-206ENST00000413574 RAG1P15918 1043 aa34.01■■■■□ 3.04
CSNK1E-206ENST00000413574 CCL23P55773 120 aa34.01■■■■□ 3.04
CSNK1E-206ENST00000413574 BFSP2Q13515 415 aa34.01■■■■□ 3.04
CSNK1E-206ENST00000413574 LTBP2Q14767 1821 aa34.01■■■■□ 3.04
CSNK1E-206ENST00000413574 RINT1Q6NUQ1 792 aa34.01■■■■□ 3.04
CSNK1E-206ENST00000413574 CLEC17AQ6ZS10 378 aa34.01■■■■□ 3.04
CSNK1E-206ENST00000413574 WNT8AQ9H1J5 351 aa34.01■■■■□ 3.04
CSNK1E-206ENST00000413574 GPRC5CQ9NQ84 441 aa34.01■■■■□ 3.04
CSNK1E-206ENST00000413574 AKT3Q9Y243 479 aa34.01■■■■□ 3.04
CSNK1E-206ENST00000413574 TANC1Q9C0D5 1861 aa34.01■■■■□ 3.03
CSNK1E-206ENST00000413574 GOLGA6L4A6NEF3 574 aa34.01■■■■□ 3.03
CSNK1E-206ENST00000413574 TMOD1P28289 359 aa34.01■■■■□ 3.03
CSNK1E-206ENST00000413574 NDUFA8P51970 172 aa34.01■■■■□ 3.03
CSNK1E-206ENST00000413574 CSPP1Q1MSJ5 1256 aa34.01■■■■□ 3.03
CSNK1E-206ENST00000413574 CCDC155Q8N6L0 562 aa34.01■■■■□ 3.03
CSNK1E-206ENST00000413574 MRPS27Q92552 414 aaKnown RBP34.01■■■■□ 3.03
CSNK1E-206ENST00000413574 ZNF668Q96K58 619 aaPredicted RBP34.01■■■■□ 3.03
CSNK1E-206ENST00000413574 JPH2Q9BR39 696 aaPredicted RBP34.01■■■■□ 3.03
CSNK1E-206ENST00000413574 STK17AQ9UEE5 414 aa34.01■■■■□ 3.03
CSNK1E-206ENST00000413574 HPSEQ9Y251 543 aa34.01■■■■□ 3.03
CSNK1E-206ENST00000413574 TIMP1P01033 207 aa34■■■■□ 3.03
CSNK1E-206ENST00000413574 CYP11B2P19099 503 aa34■■■■□ 3.03
CSNK1E-206ENST00000413574 MLLT1Q03111 559 aaPredicted RBP34■■■■□ 3.03
CSNK1E-206ENST00000413574 RBL2Q08999 1139 aa34■■■■□ 3.03
CSNK1E-206ENST00000413574 TRAF7Q6Q0C0 670 aa34■■■■□ 3.03
CSNK1E-206ENST00000413574 TMEM87AQ8NBN3 555 aa34■■■■□ 3.03
CSNK1E-206ENST00000413574 SCLYQ96I15 445 aa34■■■■□ 3.03
CSNK1E-206ENST00000413574 SUCLA2Q9P2R7 463 aaPredicted RBP34■■■■□ 3.03
CSNK1E-206ENST00000413574 PITPNM1O00562 1244 aa33.99■■■■□ 3.03
CSNK1E-206ENST00000413574 RAD51AP2Q09MP3 1159 aa33.99■■■■□ 3.03
CSNK1E-206ENST00000413574 C1orf186Q6ZWK4 172 aa33.99■■■■□ 3.03
CSNK1E-206ENST00000413574 RPAINQ86UA6 219 aa33.99■■■■□ 3.03
CSNK1E-206ENST00000413574 RSPH3Q86UC2 560 aa33.99■■■■□ 3.03
CSNK1E-206ENST00000413574 EXOC8Q8IYI6 725 aa33.99■■■■□ 3.03
CSNK1E-206ENST00000413574 NR2E3Q9Y5X4 410 aa33.99■■■■□ 3.03
CSNK1E-206ENST00000413574 NPHP3-ACAD11A0A0J9YXS1 232 aa33.98■■■■□ 3.03
CSNK1E-206ENST00000413574 CHRNA1P02708 482 aa33.98■■■■□ 3.03
CSNK1E-206ENST00000413574 DNM2P50570 870 aa33.98■■■■□ 3.03
CSNK1E-206ENST00000413574 ARSHQ5FYA8 562 aa33.98■■■■□ 3.03
CSNK1E-206ENST00000413574 KSR1Q8IVT5 923 aa33.98■■■■□ 3.03
CSNK1E-206ENST00000413574 MAP7D2Q96T17 732 aa33.98■■■■□ 3.03
CSNK1E-206ENST00000413574 FAM237AA0A1B0GTK4 181 aa33.97■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms