RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 LAD1O00515 517 aa8.63□□□□□ -1.03
CPSF4-202ENST00000412686 SOX1O00570 391 aaPredicted RBP8.63□□□□□ -1.03
CPSF4-202ENST00000412686 F13A1P00488 732 aa8.63□□□□□ -1.03
CPSF4-202ENST00000412686 ZSCAN22P10073 491 aaPredicted RBP8.63□□□□□ -1.03
CPSF4-202ENST00000412686 GHRP10912 638 aa8.63□□□□□ -1.03
CPSF4-202ENST00000412686 MARCKSP29966 332 aaPredicted RBP8.63□□□□□ -1.03
CPSF4-202ENST00000412686 PRPHP41219 470 aa8.63□□□□□ -1.03
CPSF4-202ENST00000412686 MRPS6P82932 125 aaKnown RBP8.63□□□□□ -1.03
CPSF4-202ENST00000412686 TBC1D8BQ0IIM8 1120 aa8.63□□□□□ -1.03
CPSF4-202ENST00000412686 TMEM266Q2M3C6 531 aa8.63□□□□□ -1.03
CPSF4-202ENST00000412686 XKR9Q5GH70 373 aa8.63□□□□□ -1.03
CPSF4-202ENST00000412686 HABP4Q5JVS0 413 aaKnown RBP8.63□□□□□ -1.03
CPSF4-202ENST00000412686 FAM109BQ6ICB4 259 aaPredicted RBP8.63□□□□□ -1.03
CPSF4-202ENST00000412686 DTHD1Q6ZMT9 781 aa8.63□□□□□ -1.03
CPSF4-202ENST00000412686 KIAA0319LQ8IZA0 1049 aa8.63□□□□□ -1.03
CPSF4-202ENST00000412686 IGSF22Q8N9C0 903 aa8.63□□□□□ -1.03
CPSF4-202ENST00000412686 NEK9Q8TD19 979 aa8.63□□□□□ -1.03
CPSF4-202ENST00000412686 SNX29Q8TEQ0 813 aa8.63□□□□□ -1.03
CPSF4-202ENST00000412686 TMEM40Q8WWA1 233 aa8.63□□□□□ -1.03
CPSF4-202ENST00000412686 TNPO1Q92973 898 aaKnown RBP8.63□□□□□ -1.03
CPSF4-202ENST00000412686 CEP170P1Q96L14 293 aa8.63□□□□□ -1.03
CPSF4-202ENST00000412686 RNPC3Q96LT9 517 aaKnown RBP8.63□□□□□ -1.03
CPSF4-202ENST00000412686 PLIN2Q99541 437 aa8.63□□□□□ -1.03
CPSF4-202ENST00000412686 MMTAG2Q9BU76 263 aaKnown RBP8.63□□□□□ -1.03
CPSF4-202ENST00000412686 AGO3Q9H9G7 860 aaKnown RBP8.63□□□□□ -1.03
CPSF4-202ENST00000412686 CYP26B1Q9NR63 512 aa8.63□□□□□ -1.03
CPSF4-202ENST00000412686 TFIP11Q9UBB9 837 aaKnown RBP8.63□□□□□ -1.03
CPSF4-202ENST00000412686 DAXXQ9UER7 740 aaPredicted RBP8.63□□□□□ -1.03
CPSF4-202ENST00000412686 LRWD1Q9UFC0 647 aa8.63□□□□□ -1.03
CPSF4-202ENST00000412686 TRPV2Q9Y5S1 764 aa8.63□□□□□ -1.03
CPSF4-202ENST00000412686 GBF1Q92538 1859 aa8.63□□□□□ -1.03
CPSF4-202ENST00000412686 IGKV6-21A0A0C4DH24 114 aa8.62□□□□□ -1.03
CPSF4-202ENST00000412686 GRXCR1A8MXD5 290 aa8.62□□□□□ -1.03
CPSF4-202ENST00000412686 DKC1O60832 514 aaKnown RBP eCLIP8.62□□□□□ -1.03
CPSF4-202ENST00000412686 CAND2O75155 1236 aa8.62□□□□□ -1.03
CPSF4-202ENST00000412686 LYPLA2O95372 231 aa8.62□□□□□ -1.03
CPSF4-202ENST00000412686 FGBP02675 491 aa8.62□□□□□ -1.03
CPSF4-202ENST00000412686 CXCL10P02778 98 aa8.62□□□□□ -1.03
CPSF4-202ENST00000412686 RPA1P27694 616 aa8.62□□□□□ -1.03
CPSF4-202ENST00000412686 RFC2P35250 354 aa8.62□□□□□ -1.03
CPSF4-202ENST00000412686 CCT6AP40227 531 aaKnown RBP8.62□□□□□ -1.03
CPSF4-202ENST00000412686 RARRES1P49788 294 aa8.62□□□□□ -1.03
CPSF4-202ENST00000412686 BECN1Q14457 450 aa8.62□□□□□ -1.03
CPSF4-202ENST00000412686 LPIN1Q14693 890 aa8.62□□□□□ -1.03
CPSF4-202ENST00000412686 ZRSR1Q15695 479 aaKnown RBP8.62□□□□□ -1.03
CPSF4-202ENST00000412686 KIZQ2M2Z5 673 aa8.62□□□□□ -1.03
CPSF4-202ENST00000412686 FAM26DQ5JW98 314 aa8.62□□□□□ -1.03
CPSF4-202ENST00000412686 SPECC1Q5M775 1068 aa8.62□□□□□ -1.03
CPSF4-202ENST00000412686 FBXO47Q5MNV8 452 aa8.62□□□□□ -1.03
CPSF4-202ENST00000412686 PSRC1Q6PGN9 363 aaPredicted RBP8.62□□□□□ -1.03
CPSF4-202ENST00000412686 MAEAQ7L5Y9 396 aa8.62□□□□□ -1.03
CPSF4-202ENST00000412686 KCNK18Q7Z418 384 aa8.62□□□□□ -1.03
CPSF4-202ENST00000412686 TMCO2Q7Z6W1 182 aaPredicted RBP8.62□□□□□ -1.03
CPSF4-202ENST00000412686 RPAINQ86UA6 219 aa8.62□□□□□ -1.03
CPSF4-202ENST00000412686 RSPH3Q86UC2 560 aa8.62□□□□□ -1.03
CPSF4-202ENST00000412686 KSR1Q8IVT5 923 aa8.62□□□□□ -1.03
CPSF4-202ENST00000412686 DBF4BQ8NFT6 615 aa8.62□□□□□ -1.03
CPSF4-202ENST00000412686 ERMNQ8TAM6 284 aa8.62□□□□□ -1.03
CPSF4-202ENST00000412686 LRRC15Q8TF66 581 aa8.62□□□□□ -1.03
CPSF4-202ENST00000412686 TMEM143Q96AN5 459 aa8.62□□□□□ -1.03
CPSF4-202ENST00000412686 LRCH3Q96II8 777 aa8.62□□□□□ -1.03
CPSF4-202ENST00000412686 CLIC6Q96NY7 704 aa8.62□□□□□ -1.03
CPSF4-202ENST00000412686 PNMA5Q96PV4 448 aa8.62□□□□□ -1.03
CPSF4-202ENST00000412686 OSMRQ99650 979 aa8.62□□□□□ -1.03
CPSF4-202ENST00000412686 POLR3CQ9BUI4 534 aaPredicted RBP8.62□□□□□ -1.03
CPSF4-202ENST00000412686 CELF4Q9BZC1 486 aaKnown RBP8.62□□□□□ -1.03
CPSF4-202ENST00000412686 ZSCAN16Q9H4T2 348 aaPredicted RBP8.62□□□□□ -1.03
CPSF4-202ENST00000412686 TUFT1Q9NNX1 390 aa8.62□□□□□ -1.03
CPSF4-202ENST00000412686 XPNPEP1Q9NQW7 623 aa8.62□□□□□ -1.03
CPSF4-202ENST00000412686 FBXO2Q9UK22 296 aaPredicted RBP8.62□□□□□ -1.03
CPSF4-202ENST00000412686 AKT3Q9Y243 479 aa8.62□□□□□ -1.03
CPSF4-202ENST00000412686 MICAL3Q7RTP6 2002 aa8.62□□□□□ -1.03
CPSF4-202ENST00000412686 ZBBXA8MT70 800 aa8.61□□□□□ -1.03
CPSF4-202ENST00000412686 E9PMD0 336 aa8.61□□□□□ -1.03
CPSF4-202ENST00000412686 MAGEB2O15479 319 aa8.61□□□□□ -1.03
CPSF4-202ENST00000412686 USO1O60763 962 aaKnown RBP8.61□□□□□ -1.03
CPSF4-202ENST00000412686 GPR32O75388 356 aa8.61□□□□□ -1.03
CPSF4-202ENST00000412686 MAFO75444 373 aaPredicted RBP8.61□□□□□ -1.03
CPSF4-202ENST00000412686 BRD1O95696 1058 aa8.61□□□□□ -1.03
CPSF4-202ENST00000412686 CD52P31358 61 aa8.61□□□□□ -1.03
CPSF4-202ENST00000412686 GPC3P51654 580 aa8.61□□□□□ -1.03
CPSF4-202ENST00000412686 POLGP54098 1239 aaPredicted RBP8.61□□□□□ -1.03
CPSF4-202ENST00000412686 NLRP11P59045 1033 aaKnown RBP8.61□□□□□ -1.03
CPSF4-202ENST00000412686 DEFB103AP81534 67 aa8.61□□□□□ -1.03
CPSF4-202ENST00000412686 DNM1Q05193 864 aaKnown RBP8.61□□□□□ -1.03
CPSF4-202ENST00000412686 PDIA5Q14554 519 aa8.61□□□□□ -1.03
CPSF4-202ENST00000412686 EMC2Q15006 297 aa8.61□□□□□ -1.03
CPSF4-202ENST00000412686 PLEKHG4Q58EX7 1191 aa8.61□□□□□ -1.03
CPSF4-202ENST00000412686 RASIP1Q5U651 963 aa8.61□□□□□ -1.03
CPSF4-202ENST00000412686 IER5Q5VY09 327 aa8.61□□□□□ -1.03
CPSF4-202ENST00000412686 KRT79Q5XKE5 535 aa8.61□□□□□ -1.03
CPSF4-202ENST00000412686 ARL6IP4Q66PJ3 421 aaKnown RBP8.61□□□□□ -1.03
CPSF4-202ENST00000412686 HAUS3Q68CZ6 603 aa8.61□□□□□ -1.03
CPSF4-202ENST00000412686 CNKSR3Q6P9H4 555 aa8.61□□□□□ -1.03
CPSF4-202ENST00000412686 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.61□□□□□ -1.03
CPSF4-202ENST00000412686 USP49Q70CQ1 688 aa8.61□□□□□ -1.03
CPSF4-202ENST00000412686 RPUSD2Q8IZ73 545 aaKnown RBP8.61□□□□□ -1.03
CPSF4-202ENST00000412686 LINC01599Q8WXQ3 324 aa8.61□□□□□ -1.03
CPSF4-202ENST00000412686 HERVK_113Q902F9 699 aa8.61□□□□□ -1.03
CPSF4-202ENST00000412686 CSRNP2Q9H175 543 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms