RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 TMX2Q9Y320 296 aa17.34■□□□□ 0.37
HOXD3-202ENST00000410016 COL2A1P02458 1487 aaPredicted RBP17.34■□□□□ 0.37
HOXD3-202ENST00000410016 SHTN1A0MZ66 631 aa17.33■□□□□ 0.37
HOXD3-202ENST00000410016 H0YIN7 160 aa17.33■□□□□ 0.37
HOXD3-202ENST00000410016 HSF2BPO75031 334 aa17.33■□□□□ 0.37
HOXD3-202ENST00000410016 NOP2P46087 812 aaKnown RBP17.33■□□□□ 0.37
HOXD3-202ENST00000410016 PAK2Q13177 524 aa17.33■□□□□ 0.37
HOXD3-202ENST00000410016 COG2Q14746 738 aa17.33■□□□□ 0.37
HOXD3-202ENST00000410016 IFI16Q16666 785 aaKnown RBP17.33■□□□□ 0.37
HOXD3-202ENST00000410016 KSR1Q8IVT5 923 aa17.33■□□□□ 0.37
HOXD3-202ENST00000410016 FAM186BQ8IYM0 893 aa17.33■□□□□ 0.37
HOXD3-202ENST00000410016 SLC30A5Q8TAD4 765 aa17.33■□□□□ 0.37
HOXD3-202ENST00000410016 PIK3R5Q8WYR1 880 aa17.33■□□□□ 0.37
HOXD3-202ENST00000410016 PBKQ96KB5 322 aa17.33■□□□□ 0.37
HOXD3-202ENST00000410016 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.33■□□□□ 0.37
HOXD3-202ENST00000410016 DMAC2Q9NW81 257 aa17.33■□□□□ 0.37
HOXD3-202ENST00000410016 HERC5Q9UII4 1024 aaKnown RBP17.33■□□□□ 0.37
HOXD3-202ENST00000410016 A0A0A6YYK5 440 aaPredicted RBP17.33■□□□□ 0.36
HOXD3-202ENST00000410016 YDJCA8MPS7 323 aa17.33■□□□□ 0.36
HOXD3-202ENST00000410016 CHMP2AO43633 222 aa17.33■□□□□ 0.36
HOXD3-202ENST00000410016 TAF4BQ92750 862 aa17.33■□□□□ 0.36
HOXD3-202ENST00000410016 MKNK1Q9BUB5 465 aa17.33■□□□□ 0.36
HOXD3-202ENST00000410016 INTUQ9ULD6 942 aa17.33■□□□□ 0.36
HOXD3-202ENST00000410016 STXBP5LQ9Y2K9 1186 aa17.33■□□□□ 0.36
HOXD3-202ENST00000410016 ZNF233A6NK53 670 aa17.32■□□□□ 0.36
HOXD3-202ENST00000410016 GCOM1H8Y6P7 765 aaPredicted RBP17.32■□□□□ 0.36
HOXD3-202ENST00000410016 H2AFZP0C0S5 128 aa17.32■□□□□ 0.36
HOXD3-202ENST00000410016 POLR2MP0CAP2 368 aa17.32■□□□□ 0.36
HOXD3-202ENST00000410016 CEP55Q53EZ4 464 aa17.32■□□□□ 0.36
HOXD3-202ENST00000410016 B3GNT9Q6UX72 402 aa17.32■□□□□ 0.36
HOXD3-202ENST00000410016 H2AFVQ71UI9 128 aa17.32■□□□□ 0.36
HOXD3-202ENST00000410016 METTL13Q8N6R0 699 aa17.32■□□□□ 0.36
HOXD3-202ENST00000410016 FLAD1Q8NFF5 587 aa17.32■□□□□ 0.36
HOXD3-202ENST00000410016 BRWD3Q6RI45 1802 aa17.32■□□□□ 0.36
HOXD3-202ENST00000410016 SLX4Q8IY92 1834 aa17.32■□□□□ 0.36
HOXD3-202ENST00000410016 BHMG1C9JSJ3 638 aaPredicted RBP17.32■□□□□ 0.36
HOXD3-202ENST00000410016 TRIM66O15016 1216 aa17.32■□□□□ 0.36
HOXD3-202ENST00000410016 EVI5O60447 810 aa17.32■□□□□ 0.36
HOXD3-202ENST00000410016 KRT14P02533 472 aa17.32■□□□□ 0.36
HOXD3-202ENST00000410016 VIL1P09327 827 aaKnown RBP17.32■□□□□ 0.36
HOXD3-202ENST00000410016 FERP16591 822 aa17.32■□□□□ 0.36
HOXD3-202ENST00000410016 PRELPP51888 382 aa17.32■□□□□ 0.36
HOXD3-202ENST00000410016 TNNC1P63316 161 aa17.32■□□□□ 0.36
HOXD3-202ENST00000410016 TRAF1Q13077 416 aa17.32■□□□□ 0.36
HOXD3-202ENST00000410016 SYT11Q9BT88 431 aa17.32■□□□□ 0.36
HOXD3-202ENST00000410016 RANBP17Q9H2T7 1088 aaKnown RBP17.32■□□□□ 0.36
HOXD3-202ENST00000410016 SEL1LQ9UBV2 794 aa17.32■□□□□ 0.36
HOXD3-202ENST00000410016 RSPH14Q9UHP6 348 aa17.32■□□□□ 0.36
HOXD3-202ENST00000410016 FRMPD4Q14CM0 1322 aa17.32■□□□□ 0.36
HOXD3-202ENST00000410016 GFPT2O94808 682 aa17.31■□□□□ 0.36
HOXD3-202ENST00000410016 MUTP22033 750 aa17.31■□□□□ 0.36
HOXD3-202ENST00000410016 CHRNA5P30532 468 aa17.31■□□□□ 0.36
HOXD3-202ENST00000410016 FMO5P49326 533 aa17.31■□□□□ 0.36
HOXD3-202ENST00000410016 UBXN2AP68543 259 aa17.31■□□□□ 0.36
HOXD3-202ENST00000410016 VPS36Q86VN1 386 aa17.31■□□□□ 0.36
HOXD3-202ENST00000410016 KLHL7Q8IXQ5 586 aa17.31■□□□□ 0.36
HOXD3-202ENST00000410016 LNX1Q8TBB1 728 aaPredicted RBP17.31■□□□□ 0.36
HOXD3-202ENST00000410016 CCDC43Q96MW1 224 aaKnown RBP17.31■□□□□ 0.36
HOXD3-202ENST00000410016 STK33Q9BYT3 514 aa17.31■□□□□ 0.36
HOXD3-202ENST00000410016 GPR88Q9GZN0 384 aa17.31■□□□□ 0.36
HOXD3-202ENST00000410016 ARHGEF10LQ9HCE6 1279 aa17.31■□□□□ 0.36
HOXD3-202ENST00000410016 KIF13BQ9NQT8 1826 aa17.31■□□□□ 0.36
HOXD3-202ENST00000410016 F8VZ95 297 aa17.31■□□□□ 0.36
HOXD3-202ENST00000410016 CEP104O60308 925 aa17.31■□□□□ 0.36
HOXD3-202ENST00000410016 GAS7O60861 476 aa17.31■□□□□ 0.36
HOXD3-202ENST00000410016 ARP10275 920 aa17.31■□□□□ 0.36
HOXD3-202ENST00000410016 ECHS1P30084 290 aa17.31■□□□□ 0.36
HOXD3-202ENST00000410016 SOX5P35711 763 aa17.31■□□□□ 0.36
HOXD3-202ENST00000410016 STAT1P42224 750 aa17.31■□□□□ 0.36
HOXD3-202ENST00000410016 NPEPPSP55786 919 aa17.31■□□□□ 0.36
HOXD3-202ENST00000410016 CBWD6Q4V339 395 aa17.31■□□□□ 0.36
HOXD3-202ENST00000410016 CBWD3Q5JTY5 395 aa17.31■□□□□ 0.36
HOXD3-202ENST00000410016 CBWD5Q5RIA9 395 aa17.31■□□□□ 0.36
HOXD3-202ENST00000410016 CCDC174Q6PII3 467 aa17.31■□□□□ 0.36
HOXD3-202ENST00000410016 EIF1ADQ8N9N8 165 aaKnown RBP17.31■□□□□ 0.36
HOXD3-202ENST00000410016 WHAMMQ8TF30 809 aa17.31■□□□□ 0.36
HOXD3-202ENST00000410016 ZFP91Q96JP5 570 aaPredicted RBP17.31■□□□□ 0.36
HOXD3-202ENST00000410016 CALR3Q96L12 384 aaKnown RBP17.31■□□□□ 0.36
HOXD3-202ENST00000410016 NACC1Q96RE7 527 aa17.31■□□□□ 0.36
HOXD3-202ENST00000410016 STRA6Q9BX79 667 aa17.31■□□□□ 0.36
HOXD3-202ENST00000410016 CAPS2Q9BXY5 557 aa17.31■□□□□ 0.36
HOXD3-202ENST00000410016 AGPAT3Q9NRZ7 376 aa17.31■□□□□ 0.36
HOXD3-202ENST00000410016 SUCLA2Q9P2R7 463 aaPredicted RBP17.31■□□□□ 0.36
HOXD3-202ENST00000410016 GRIN2DO15399 1336 aa17.31■□□□□ 0.36
HOXD3-202ENST00000410016 TCP10L2B9ZVM9 353 aa17.3■□□□□ 0.36
HOXD3-202ENST00000410016 GUCY2FP51841 1108 aa17.3■□□□□ 0.36
HOXD3-202ENST00000410016 GALCP54803 685 aa17.3■□□□□ 0.36
HOXD3-202ENST00000410016 ERVK-9P63128 1117 aa17.3■□□□□ 0.36
HOXD3-202ENST00000410016 SKOR1P84550 965 aa17.3■□□□□ 0.36
HOXD3-202ENST00000410016 PTPROQ16827 1216 aa17.3■□□□□ 0.36
HOXD3-202ENST00000410016 NT5DC3Q86UY8 548 aa17.3■□□□□ 0.36
HOXD3-202ENST00000410016 CD302Q8IX05 232 aa17.3■□□□□ 0.36
HOXD3-202ENST00000410016 FAM178BQ8IXR5 827 aa17.3■□□□□ 0.36
HOXD3-202ENST00000410016 RASGEF1CQ8N431 466 aa17.3■□□□□ 0.36
HOXD3-202ENST00000410016 RUFY1Q96T51 708 aa17.3■□□□□ 0.36
HOXD3-202ENST00000410016 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.3■□□□□ 0.36
HOXD3-202ENST00000410016 ISCUQ9H1K1 167 aa17.3■□□□□ 0.36
HOXD3-202ENST00000410016 UNC45AQ9H3U1 944 aa17.3■□□□□ 0.36
HOXD3-202ENST00000410016 KCND2Q9NZV8 630 aa17.3■□□□□ 0.36
HOXD3-202ENST00000410016 CFAP58Q5T655 872 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms