RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 FKBP1BP68106 108 aa5.17□□□□□ -1.58
SF3B1-202ENST00000409915 VGLL4Q14135 290 aa5.17□□□□□ -1.58
SF3B1-202ENST00000409915 MAP7Q14244 749 aa5.17□□□□□ -1.58
SF3B1-202ENST00000409915 PCBP1Q15365 356 aaKnown RBP eCLIP5.17□□□□□ -1.58
SF3B1-202ENST00000409915 DHCR24Q15392 516 aa5.17□□□□□ -1.58
SF3B1-202ENST00000409915 TRIP4Q15650 581 aaPredicted RBP5.17□□□□□ -1.58
SF3B1-202ENST00000409915 ABCB5Q2M3G0 1257 aa5.17□□□□□ -1.58
SF3B1-202ENST00000409915 SHROOM1Q2M3G4 852 aaPredicted RBP5.17□□□□□ -1.58
SF3B1-202ENST00000409915 SUPT20HL1Q3ZLR7 823 aa5.17□□□□□ -1.58
SF3B1-202ENST00000409915 ARHGAP29Q52LW3 1261 aa5.17□□□□□ -1.58
SF3B1-202ENST00000409915 FKBP1CQ5VVH2 108 aa5.17□□□□□ -1.58
SF3B1-202ENST00000409915 RGMBQ6NW40 437 aa5.17□□□□□ -1.58
SF3B1-202ENST00000409915 CFAP161Q6P656 301 aa5.17□□□□□ -1.58
SF3B1-202ENST00000409915 CCDC129Q6ZRS4 1044 aa5.17□□□□□ -1.58
SF3B1-202ENST00000409915 ARMCX6Q7L4S7 300 aa5.17□□□□□ -1.58
SF3B1-202ENST00000409915 ARMC9Q7Z3E5 817 aa5.17□□□□□ -1.58
SF3B1-202ENST00000409915 SRLQ86TD4 932 aa5.17□□□□□ -1.58
SF3B1-202ENST00000409915 TTC6Q86TZ1 520 aa5.17□□□□□ -1.58
SF3B1-202ENST00000409915 CCDC84Q86UT8 332 aaPredicted RBP5.17□□□□□ -1.58
SF3B1-202ENST00000409915 NLRP8Q86W28 1048 aa5.17□□□□□ -1.58
SF3B1-202ENST00000409915 RASSF3Q86WH2 238 aa5.17□□□□□ -1.58
SF3B1-202ENST00000409915 REXO1Q8N1G1 1221 aaKnown RBP5.17□□□□□ -1.58
SF3B1-202ENST00000409915 C1orf127Q8N9H9 656 aa5.17□□□□□ -1.58
SF3B1-202ENST00000409915 KBTBD3Q8NAB2 608 aa5.17□□□□□ -1.58
SF3B1-202ENST00000409915 SDR42E1Q8WUS8 393 aa5.17□□□□□ -1.58
SF3B1-202ENST00000409915 GATAD2BQ8WXI9 593 aa5.17□□□□□ -1.58
SF3B1-202ENST00000409915 ZKSCAN4Q969J2 545 aaPredicted RBP5.17□□□□□ -1.58
SF3B1-202ENST00000409915 OSBP2Q969R2 916 aa5.17□□□□□ -1.58
SF3B1-202ENST00000409915 TTC17Q96AE7 1141 aa5.17□□□□□ -1.58
SF3B1-202ENST00000409915 WRNIP1Q96S55 665 aa5.17□□□□□ -1.58
SF3B1-202ENST00000409915 DHRS4Q9BTZ2 278 aa5.17□□□□□ -1.58
SF3B1-202ENST00000409915 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.17□□□□□ -1.58
SF3B1-202ENST00000409915 KLHL11Q9NVR0 708 aa5.17□□□□□ -1.58
SF3B1-202ENST00000409915 STAP2Q9UGK3 403 aa5.17□□□□□ -1.58
SF3B1-202ENST00000409915 DDX20Q9UHI6 824 aaKnown RBP5.17□□□□□ -1.58
SF3B1-202ENST00000409915 PALD1Q9ULE6 856 aa5.17□□□□□ -1.58
SF3B1-202ENST00000409915 ZBTB21Q9ULJ3 1066 aa5.17□□□□□ -1.58
SF3B1-202ENST00000409915 DDX60LQ5H9U9 1706 aaKnown RBP5.17□□□□□ -1.58
SF3B1-202ENST00000409915 SIPA1L1O43166 1804 aa5.16□□□□□ -1.58
SF3B1-202ENST00000409915 NAV1Q8NEY1 1877 aa5.16□□□□□ -1.58
SF3B1-202ENST00000409915 CDK5RAP2Q96SN8 1893 aa5.16□□□□□ -1.58
SF3B1-202ENST00000409915 ABHD14A-ACY1A0A1B0GW23 586 aa5.16□□□□□ -1.58
SF3B1-202ENST00000409915 A0A1W2PP55 124 aa5.16□□□□□ -1.58
SF3B1-202ENST00000409915 A0A1W2PRQ8 180 aa5.16□□□□□ -1.58
SF3B1-202ENST00000409915 FIGNL2A6NMB9 653 aa5.16□□□□□ -1.58
SF3B1-202ENST00000409915 TGFBR3LH3BV60 316 aa5.16□□□□□ -1.58
SF3B1-202ENST00000409915 RNF113AO15541 343 aaKnown RBP5.16□□□□□ -1.58
SF3B1-202ENST00000409915 SUSD5O60279 629 aa5.16□□□□□ -1.58
SF3B1-202ENST00000409915 IL2RAP01589 272 aa5.16□□□□□ -1.58
SF3B1-202ENST00000409915 RPN1P04843 607 aaKnown RBP5.16□□□□□ -1.58
SF3B1-202ENST00000409915 HSPA1AP0DMV8 641 aaKnown RBP5.16□□□□□ -1.58
SF3B1-202ENST00000409915 HSPA1BP0DMV9 641 aaKnown RBP5.16□□□□□ -1.58
SF3B1-202ENST00000409915 GSPT1P15170 499 aaKnown RBP5.16□□□□□ -1.58
SF3B1-202ENST00000409915 GUCY2CP25092 1073 aa5.16□□□□□ -1.58
SF3B1-202ENST00000409915 ECE1P42892 770 aa5.16□□□□□ -1.58
SF3B1-202ENST00000409915 CTSOP43234 321 aaPredicted RBP5.16□□□□□ -1.58
SF3B1-202ENST00000409915 CCT5P48643 541 aa5.16□□□□□ -1.58
SF3B1-202ENST00000409915 RELBQ01201 579 aa5.16□□□□□ -1.58
SF3B1-202ENST00000409915 PDE1CQ14123 709 aaPredicted RBP5.16□□□□□ -1.58
SF3B1-202ENST00000409915 GALEQ14376 348 aa5.16□□□□□ -1.58
SF3B1-202ENST00000409915 RRP1BQ14684 758 aaKnown RBP5.16□□□□□ -1.58
SF3B1-202ENST00000409915 UBE3CQ15386 1083 aa5.16□□□□□ -1.58
SF3B1-202ENST00000409915 SYCP1Q15431 976 aa5.16□□□□□ -1.58
SF3B1-202ENST00000409915 ELF2Q15723 593 aa5.16□□□□□ -1.58
SF3B1-202ENST00000409915 FAM209AQ5JX71 171 aa5.16□□□□□ -1.58
SF3B1-202ENST00000409915 GPR158Q5T848 1215 aa5.16□□□□□ -1.58
SF3B1-202ENST00000409915 ARMC3Q5W041 872 aa5.16□□□□□ -1.58
SF3B1-202ENST00000409915 DCAF15Q66K64 600 aa5.16□□□□□ -1.58
SF3B1-202ENST00000409915 CASC1Q6TDU7 716 aa5.16□□□□□ -1.58
SF3B1-202ENST00000409915 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.16□□□□□ -1.58
SF3B1-202ENST00000409915 Q6ZVU0 165 aa5.16□□□□□ -1.58
SF3B1-202ENST00000409915 REC114Q7Z4M0 266 aa5.16□□□□□ -1.58
SF3B1-202ENST00000409915 RPAINQ86UA6 219 aa5.16□□□□□ -1.58
SF3B1-202ENST00000409915 FAM186BQ8IYM0 893 aa5.16□□□□□ -1.58
SF3B1-202ENST00000409915 CMTR1Q8N1G2 835 aaKnown RBP5.16□□□□□ -1.58
SF3B1-202ENST00000409915 NKAPQ8N5F7 415 aaKnown RBP5.16□□□□□ -1.58
SF3B1-202ENST00000409915 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.16□□□□□ -1.58
SF3B1-202ENST00000409915 POF1BQ8WVV4 589 aa5.16□□□□□ -1.58
SF3B1-202ENST00000409915 RILPL2Q969X0 211 aa5.16□□□□□ -1.58
SF3B1-202ENST00000409915 AIDAQ96BJ3 306 aa5.16□□□□□ -1.58
SF3B1-202ENST00000409915 CDK5RAP3Q96JB5 506 aa5.16□□□□□ -1.58
SF3B1-202ENST00000409915 FAM227BQ96M60 508 aa5.16□□□□□ -1.58
SF3B1-202ENST00000409915 LRGUKQ96M69 825 aa5.16□□□□□ -1.58
SF3B1-202ENST00000409915 TTC14Q96N46 770 aa5.16□□□□□ -1.58
SF3B1-202ENST00000409915 TTC1Q99614 292 aa5.16□□□□□ -1.58
SF3B1-202ENST00000409915 CDC6Q99741 560 aa5.16□□□□□ -1.58
SF3B1-202ENST00000409915 CEP44Q9C0F1 390 aa5.16□□□□□ -1.58
SF3B1-202ENST00000409915 DNAJC18Q9H819 358 aa5.16□□□□□ -1.58
SF3B1-202ENST00000409915 ABCB6Q9NP58 842 aa5.16□□□□□ -1.58
SF3B1-202ENST00000409915 MED4Q9NPJ6 270 aa5.16□□□□□ -1.58
SF3B1-202ENST00000409915 RIC8AQ9NPQ8 531 aa5.16□□□□□ -1.58
SF3B1-202ENST00000409915 MAN1C1Q9NR34 630 aa5.16□□□□□ -1.58
SF3B1-202ENST00000409915 LATS2Q9NRM7 1088 aa5.16□□□□□ -1.58
SF3B1-202ENST00000409915 OGFRQ9NZT2 677 aa5.16□□□□□ -1.58
SF3B1-202ENST00000409915 FEZ2Q9UHY8 353 aaPredicted RBP5.16□□□□□ -1.58
SF3B1-202ENST00000409915 PNMA8BQ9ULN7 279 aaPredicted RBP5.16□□□□□ -1.58
SF3B1-202ENST00000409915 DIS3Q9Y2L1 958 aaKnown RBP5.16□□□□□ -1.58
SF3B1-202ENST00000409915 NUB1Q9Y5A7 615 aa5.16□□□□□ -1.58
SF3B1-202ENST00000409915 SNCAIPQ9Y6H5 919 aa5.16□□□□□ -1.58
SF3B1-202ENST00000409915 MYH7P12883 1935 aa5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms