RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 IPO5O00410 1097 aaKnown RBP18.4■□□□□ 0.54
NUP50-203ENST00000407019 TNFRSF8P28908 595 aa18.4■□□□□ 0.54
NUP50-203ENST00000407019 DNA2P51530 1060 aa18.4■□□□□ 0.54
NUP50-203ENST00000407019 B3GNT9Q6UX72 402 aa18.4■□□□□ 0.54
NUP50-203ENST00000407019 SND1Q7KZF4 910 aaKnown RBP eCLIP18.4■□□□□ 0.54
NUP50-203ENST00000407019 FAM83AQ86UY5 434 aa18.4■□□□□ 0.54
NUP50-203ENST00000407019 NEK9Q8TD19 979 aa18.4■□□□□ 0.54
NUP50-203ENST00000407019 RIT2Q99578 217 aa18.4■□□□□ 0.54
NUP50-203ENST00000407019 LXNQ9BS40 222 aa18.4■□□□□ 0.54
NUP50-203ENST00000407019 GLIS2Q9BZE0 524 aaPredicted RBP18.4■□□□□ 0.54
NUP50-203ENST00000407019 ZNF277Q9NRM2 450 aaPredicted RBP18.4■□□□□ 0.54
NUP50-203ENST00000407019 COL4A5P29400 1685 aa18.39■□□□□ 0.53
NUP50-203ENST00000407019 ARHGEF35A5YM69 484 aa18.39■□□□□ 0.53
NUP50-203ENST00000407019 FERP16591 822 aa18.39■□□□□ 0.53
NUP50-203ENST00000407019 GUCY2CP25092 1073 aa18.39■□□□□ 0.53
NUP50-203ENST00000407019 EPHB4P54760 987 aa18.39■□□□□ 0.53
NUP50-203ENST00000407019 MRPS25P82663 173 aaKnown RBP18.39■□□□□ 0.53
NUP50-203ENST00000407019 COG2Q14746 738 aa18.39■□□□□ 0.53
NUP50-203ENST00000407019 ODR4Q5SWX8 454 aa18.39■□□□□ 0.53
NUP50-203ENST00000407019 ALKBH5Q6P6C2 394 aaKnown RBP18.39■□□□□ 0.53
NUP50-203ENST00000407019 KSR1Q8IVT5 923 aa18.39■□□□□ 0.53
NUP50-203ENST00000407019 DEFB129Q9H1M3 183 aa18.39■□□□□ 0.53
NUP50-203ENST00000407019 HSD17B4P51659 736 aa18.38■□□□□ 0.53
NUP50-203ENST00000407019 GJB7Q6PEY0 223 aa18.38■□□□□ 0.53
NUP50-203ENST00000407019 MTMR14Q8NCE2 650 aa18.38■□□□□ 0.53
NUP50-203ENST00000407019 TAF4BQ92750 862 aa18.38■□□□□ 0.53
NUP50-203ENST00000407019 INPP4AQ96PE3 977 aaPredicted RBP18.38■□□□□ 0.53
NUP50-203ENST00000407019 FAM204AQ9H8W3 233 aa18.38■□□□□ 0.53
NUP50-203ENST00000407019 AGPAT3Q9NRZ7 376 aa18.38■□□□□ 0.53
NUP50-203ENST00000407019 CCPG1Q9ULG6 757 aa18.38■□□□□ 0.53
NUP50-203ENST00000407019 NENFQ9UMX5 172 aa18.38■□□□□ 0.53
NUP50-203ENST00000407019 PACSIN2Q9UNF0 486 aaPredicted RBP18.38■□□□□ 0.53
NUP50-203ENST00000407019 ICAM1P05362 532 aa18.38■□□□□ 0.53
NUP50-203ENST00000407019 ASNSP08243 561 aa18.38■□□□□ 0.53
NUP50-203ENST00000407019 STAT1P42224 750 aa18.38■□□□□ 0.53
NUP50-203ENST00000407019 HNRNPH2P55795 449 aaKnown RBP18.38■□□□□ 0.53
NUP50-203ENST00000407019 GOLGA6L1Q8N7Z2 621 aa18.38■□□□□ 0.53
NUP50-203ENST00000407019 BANK1Q8NDB2 785 aa18.38■□□□□ 0.53
NUP50-203ENST00000407019 DMAC2Q9NW81 257 aa18.38■□□□□ 0.53
NUP50-203ENST00000407019 FRMD4BQ9Y2L6 1034 aa18.38■□□□□ 0.53
NUP50-203ENST00000407019 GOLGA6BA6NDN3 693 aa18.37■□□□□ 0.53
NUP50-203ENST00000407019 CES2O00748 559 aa18.37■□□□□ 0.53
NUP50-203ENST00000407019 GGCXP38435 758 aa18.37■□□□□ 0.53
NUP50-203ENST00000407019 PTGER2P43116 358 aa18.37■□□□□ 0.53
NUP50-203ENST00000407019 FMO5P49326 533 aa18.37■□□□□ 0.53
NUP50-203ENST00000407019 CYP2J2P51589 502 aa18.37■□□□□ 0.53
NUP50-203ENST00000407019 RPS6KA1Q15418 735 aa18.37■□□□□ 0.53
NUP50-203ENST00000407019 EMBQ6PCB8 327 aa18.37■□□□□ 0.53
NUP50-203ENST00000407019 AGBL3Q8NEM8 1001 aa18.37■□□□□ 0.53
NUP50-203ENST00000407019 GOLGA5Q8TBA6 731 aa18.37■□□□□ 0.53
NUP50-203ENST00000407019 AGBL1Q96MI9 1066 aa18.37■□□□□ 0.53
NUP50-203ENST00000407019 DDX39AO00148 427 aaKnown RBP18.37■□□□□ 0.53
NUP50-203ENST00000407019 HIP1RO75146 1068 aa18.37■□□□□ 0.53
NUP50-203ENST00000407019 BCRP11274 1271 aa18.37■□□□□ 0.53
NUP50-203ENST00000407019 ITGB5P18084 799 aa18.37■□□□□ 0.53
NUP50-203ENST00000407019 NOP2P46087 812 aaKnown RBP18.37■□□□□ 0.53
NUP50-203ENST00000407019 PPP2R5AQ15172 486 aa18.37■□□□□ 0.53
NUP50-203ENST00000407019 MIER3Q7Z3K6 550 aa18.37■□□□□ 0.53
NUP50-203ENST00000407019 AFAP1L1Q8TED9 768 aa18.37■□□□□ 0.53
NUP50-203ENST00000407019 RPTORQ8N122 1335 aa18.36■□□□□ 0.53
NUP50-203ENST00000407019 AGPSO00116 658 aa18.36■□□□□ 0.53
NUP50-203ENST00000407019 GFPT2O94808 682 aa18.36■□□□□ 0.53
NUP50-203ENST00000407019 H2AFZP0C0S5 128 aa18.36■□□□□ 0.53
NUP50-203ENST00000407019 CAPN2P17655 700 aa18.36■□□□□ 0.53
NUP50-203ENST00000407019 RXRBP28702 533 aa18.36■□□□□ 0.53
NUP50-203ENST00000407019 INPP5BP32019 993 aa18.36■□□□□ 0.53
NUP50-203ENST00000407019 TNIP1Q15025 636 aa18.36■□□□□ 0.53
NUP50-203ENST00000407019 MUM1L1Q5H9M0 696 aa18.36■□□□□ 0.53
NUP50-203ENST00000407019 H2AFVQ71UI9 128 aa18.36■□□□□ 0.53
NUP50-203ENST00000407019 IFT20Q8IY31 132 aa18.36■□□□□ 0.53
NUP50-203ENST00000407019 CAVIN3Q969G5 261 aa18.36■□□□□ 0.53
NUP50-203ENST00000407019 ZNF341Q9BYN7 854 aa18.36■□□□□ 0.53
NUP50-203ENST00000407019 INTUQ9ULD6 942 aa18.36■□□□□ 0.53
NUP50-203ENST00000407019 DDX3XO00571 662 aaKnown RBP eCLIP18.35■□□□□ 0.53
NUP50-203ENST00000407019 KIF4AO95239 1232 aa18.35■□□□□ 0.53
NUP50-203ENST00000407019 ACTN2P35609 894 aa18.35■□□□□ 0.53
NUP50-203ENST00000407019 SOX5P35711 763 aa18.35■□□□□ 0.53
NUP50-203ENST00000407019 MAPK7Q13164 816 aa18.35■□□□□ 0.53
NUP50-203ENST00000407019 ZSCAN26Q16670 478 aa18.35■□□□□ 0.53
NUP50-203ENST00000407019 NIPA1Q7RTP0 329 aa18.35■□□□□ 0.53
NUP50-203ENST00000407019 NIM1KQ8IY84 436 aa18.35■□□□□ 0.53
NUP50-203ENST00000407019 LRRC57Q8N9N7 239 aa18.35■□□□□ 0.53
NUP50-203ENST00000407019 RIN2Q8WYP3 895 aaPredicted RBP18.35■□□□□ 0.53
NUP50-203ENST00000407019 HOOK2Q96ED9 719 aa18.35■□□□□ 0.53
NUP50-203ENST00000407019 STRA6Q9BX79 667 aa18.35■□□□□ 0.53
NUP50-203ENST00000407019 COL20A1Q9P218 1284 aa18.35■□□□□ 0.53
NUP50-203ENST00000407019 PGAP2Q9UHJ9 254 aa18.35■□□□□ 0.53
NUP50-203ENST00000407019 ZNRF3Q9ULT6 936 aa18.35■□□□□ 0.53
NUP50-203ENST00000407019 ZNF536O15090 1300 aa18.35■□□□□ 0.53
NUP50-203ENST00000407019 A0A0A6YYK5 440 aaPredicted RBP18.35■□□□□ 0.53
NUP50-203ENST00000407019 F8VZ95 297 aa18.35■□□□□ 0.53
NUP50-203ENST00000407019 KCNK3O14649 394 aa18.35■□□□□ 0.53
NUP50-203ENST00000407019 PPP1R37O75864 691 aa18.35■□□□□ 0.53
NUP50-203ENST00000407019 MAP3K10Q02779 954 aa18.35■□□□□ 0.53
NUP50-203ENST00000407019 PADI6Q6TGC4 694 aa18.35■□□□□ 0.53
NUP50-203ENST00000407019 LEKR1Q6ZMV7 388 aa18.35■□□□□ 0.53
NUP50-203ENST00000407019 SLC9A9Q8IVB4 645 aa18.35■□□□□ 0.53
NUP50-203ENST00000407019 SYCP3Q8IZU3 236 aa18.35■□□□□ 0.53
NUP50-203ENST00000407019 USP38Q8NB14 1042 aa18.35■□□□□ 0.53
NUP50-203ENST00000407019 PBKQ96KB5 322 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms