RNA–Protein interactions for RNA: ENST00000405692.2

PDGFA-204, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-204ENST00000405692 PLA2G4FQ68DD2 849 aa23.27■■□□□ 1.32
PDGFA-204ENST00000405692 DTHD1Q6ZMT9 781 aa23.27■■□□□ 1.32
PDGFA-204ENST00000405692 LRRC71Q8N4P6 559 aa23.27■■□□□ 1.32
PDGFA-204ENST00000405692 POLR3CQ9BUI4 534 aaPredicted RBP23.27■■□□□ 1.32
PDGFA-204ENST00000405692 FTHL17Q9BXU8 183 aa23.27■■□□□ 1.32
PDGFA-204ENST00000405692 PBX4Q9BYU1 374 aa23.27■■□□□ 1.32
PDGFA-204ENST00000405692 WRAP73Q9P2S5 460 aaPredicted RBP23.27■■□□□ 1.32
PDGFA-204ENST00000405692 LRWD1Q9UFC0 647 aa23.27■■□□□ 1.32
PDGFA-204ENST00000405692 PCDHA11Q9Y5I1 949 aa23.27■■□□□ 1.32
PDGFA-204ENST00000405692 IGKV6-21A0A0C4DH24 114 aa23.26■■□□□ 1.31
PDGFA-204ENST00000405692 TMEM150BA6NC51 233 aa23.26■■□□□ 1.31
PDGFA-204ENST00000405692 GRXCR1A8MXD5 290 aa23.26■■□□□ 1.31
PDGFA-204ENST00000405692 VTNP04004 478 aa23.26■■□□□ 1.31
PDGFA-204ENST00000405692 MUTP22033 750 aa23.26■■□□□ 1.31
PDGFA-204ENST00000405692 POLGP54098 1239 aaPredicted RBP23.26■■□□□ 1.31
PDGFA-204ENST00000405692 PAK2Q13177 524 aa23.26■■□□□ 1.31
PDGFA-204ENST00000405692 HERC6Q8IVU3 1022 aa23.26■■□□□ 1.31
PDGFA-204ENST00000405692 TIFAQ96CG3 184 aa23.26■■□□□ 1.31
PDGFA-204ENST00000405692 CEP89Q96ST8 783 aa23.26■■□□□ 1.31
PDGFA-204ENST00000405692 RPA1P27694 616 aa23.25■■□□□ 1.31
PDGFA-204ENST00000405692 NPEPPSP55786 919 aa23.25■■□□□ 1.31
PDGFA-204ENST00000405692 NLRP11P59045 1033 aaKnown RBP23.25■■□□□ 1.31
PDGFA-204ENST00000405692 ATP2C1P98194 919 aaPredicted RBP23.25■■□□□ 1.31
PDGFA-204ENST00000405692 KIZQ2M2Z5 673 aa23.25■■□□□ 1.31
PDGFA-204ENST00000405692 DEFB123Q8N688 67 aa23.25■■□□□ 1.31
PDGFA-204ENST00000405692 SCLT1Q96NL6 688 aa23.25■■□□□ 1.31
PDGFA-204ENST00000405692 SH2D3AQ9BRG2 576 aa23.25■■□□□ 1.31
PDGFA-204ENST00000405692 ZBED2Q9BTP6 218 aa23.25■■□□□ 1.31
PDGFA-204ENST00000405692 TET1Q8NFU7 2136 aa23.24■■□□□ 1.31
PDGFA-204ENST00000405692 GPR182O15218 404 aa23.24■■□□□ 1.31
PDGFA-204ENST00000405692 STX6O43752 255 aa23.24■■□□□ 1.31
PDGFA-204ENST00000405692 GPR32O75388 356 aa23.24■■□□□ 1.31
PDGFA-204ENST00000405692 RPS6KA5O75582 802 aa23.24■■□□□ 1.31
PDGFA-204ENST00000405692 CD52P31358 61 aa23.24■■□□□ 1.31
PDGFA-204ENST00000405692 TCTN1Q2MV58 587 aa23.24■■□□□ 1.31
PDGFA-204ENST00000405692 ARL6IP4Q66PJ3 421 aaKnown RBP23.24■■□□□ 1.31
PDGFA-204ENST00000405692 FERMT3Q86UX7 667 aa23.24■■□□□ 1.31
PDGFA-204ENST00000405692 CATSPER3Q86XQ3 398 aa23.24■■□□□ 1.31
PDGFA-204ENST00000405692 IGSF22Q8N9C0 903 aa23.24■■□□□ 1.31
PDGFA-204ENST00000405692 TCP11Q8WWU5 503 aa23.24■■□□□ 1.31
PDGFA-204ENST00000405692 NACC1Q96RE7 527 aa23.24■■□□□ 1.31
PDGFA-204ENST00000405692 OSBPL7Q9BZF2 842 aa23.24■■□□□ 1.31
PDGFA-204ENST00000405692 ZSCAN16Q9H4T2 348 aaPredicted RBP23.24■■□□□ 1.31
PDGFA-204ENST00000405692 DHX33Q9H6R0 707 aaKnown RBP23.24■■□□□ 1.31
PDGFA-204ENST00000405692 PADI3Q9ULW8 664 aa23.24■■□□□ 1.31
PDGFA-204ENST00000405692 DEFB103AP81534 67 aa23.23■■□□□ 1.31
PDGFA-204ENST00000405692 OSMRQ99650 979 aa23.23■■□□□ 1.31
PDGFA-204ENST00000405692 AGO3Q9H9G7 860 aaKnown RBP23.23■■□□□ 1.31
PDGFA-204ENST00000405692 SLC28A3Q9HAS3 691 aa23.23■■□□□ 1.31
PDGFA-204ENST00000405692 SUCLA2Q9P2R7 463 aaPredicted RBP23.23■■□□□ 1.31
PDGFA-204ENST00000405692 TLL1O43897 1013 aa23.22■■□□□ 1.31
PDGFA-204ENST00000405692 DGAT1O75907 488 aa23.22■■□□□ 1.31
PDGFA-204ENST00000405692 SPATA31C1P0DKV0 1188 aa23.22■■□□□ 1.31
PDGFA-204ENST00000405692 CCT6AP40227 531 aaKnown RBP23.22■■□□□ 1.31
PDGFA-204ENST00000405692 PBX2P40425 430 aa23.22■■□□□ 1.31
PDGFA-204ENST00000405692 GPC3P51654 580 aa23.22■■□□□ 1.31
PDGFA-204ENST00000405692 RABGGTBP53611 331 aa23.22■■□□□ 1.31
PDGFA-204ENST00000405692 NFX1Q12986 1120 aaKnown RBP23.22■■□□□ 1.31
PDGFA-204ENST00000405692 MKRN4PQ13434 485 aaPredicted RBP23.22■■□□□ 1.31
PDGFA-204ENST00000405692 KRT79Q5XKE5 535 aa23.22■■□□□ 1.31
PDGFA-204ENST00000405692 ZNF410Q86VK4 478 aa23.22■■□□□ 1.31
PDGFA-204ENST00000405692 MYOCDQ8IZQ8 938 aa23.22■■□□□ 1.31
PDGFA-204ENST00000405692 NLRP7Q8WX94 980 aa23.22■■□□□ 1.31
PDGFA-204ENST00000405692 PPP1R16BQ96T49 567 aa23.22■■□□□ 1.31
PDGFA-204ENST00000405692 ADAMTS10Q9H324 1103 aa23.22■■□□□ 1.31
PDGFA-204ENST00000405692 MED24O75448 989 aa23.21■■□□□ 1.31
PDGFA-204ENST00000405692 GJB5O95377 273 aa23.21■■□□□ 1.31
PDGFA-204ENST00000405692 EIF4BP23588 611 aaKnown RBP23.21■■□□□ 1.31
PDGFA-204ENST00000405692 EMC2Q15006 297 aa23.21■■□□□ 1.31
PDGFA-204ENST00000405692 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.21■■□□□ 1.31
PDGFA-204ENST00000405692 RHPN2Q8IUC4 686 aa23.21■■□□□ 1.31
PDGFA-204ENST00000405692 PIGOQ8TEQ8 1089 aa23.21■■□□□ 1.31
PDGFA-204ENST00000405692 PSPC1Q8WXF1 523 aaKnown RBP23.21■■□□□ 1.31
PDGFA-204ENST00000405692 RAD9AQ99638 391 aa23.21■■□□□ 1.31
PDGFA-204ENST00000405692 MTRQ99707 1265 aa23.21■■□□□ 1.31
PDGFA-204ENST00000405692 GCOM2Q9BZD3 368 aaPredicted RBP23.21■■□□□ 1.31
PDGFA-204ENST00000405692 INO80BQ9C086 356 aaPredicted RBP23.21■■□□□ 1.31
PDGFA-204ENST00000405692 CDHR5Q9HBB8 845 aa23.21■■□□□ 1.31
PDGFA-204ENST00000405692 RNF216Q9NWF9 866 aaPredicted RBP23.21■■□□□ 1.31
PDGFA-204ENST00000405692 DBR1Q9UK59 544 aaKnown RBP23.21■■□□□ 1.31
PDGFA-204ENST00000405692 MTMR6Q9Y217 621 aa23.21■■□□□ 1.31
PDGFA-204ENST00000405692 NOC2LQ9Y3T9 749 aaKnown RBP23.21■■□□□ 1.31
PDGFA-204ENST00000405692 EVPLQ92817 2033 aa23.2■■□□□ 1.3
PDGFA-204ENST00000405692 ZBTB39O15060 712 aa23.2■■□□□ 1.3
PDGFA-204ENST00000405692 ASAP2O43150 1006 aa23.2■■□□□ 1.3
PDGFA-204ENST00000405692 RARRES1P49788 294 aa23.2■■□□□ 1.3
PDGFA-204ENST00000405692 RESTQ13127 1097 aa23.2■■□□□ 1.3
PDGFA-204ENST00000405692 ZNF579Q8NAF0 562 aaKnown RBP23.2■■□□□ 1.3
PDGFA-204ENST00000405692 SNX29Q8TEQ0 813 aa23.2■■□□□ 1.3
PDGFA-204ENST00000405692 TOP1MTQ969P6 601 aa23.2■■□□□ 1.3
PDGFA-204ENST00000405692 NKX2-4Q9H2Z4 354 aa23.2■■□□□ 1.3
PDGFA-204ENST00000405692 SEMA6BQ9H3T3 888 aa23.2■■□□□ 1.3
PDGFA-204ENST00000405692 ZNF576Q9H609 170 aa23.2■■□□□ 1.3
PDGFA-204ENST00000405692 ATP6V0A4Q9HBG4 840 aa23.2■■□□□ 1.3
PDGFA-204ENST00000405692 ERVK-5Q9HDB9 667 aa23.2■■□□□ 1.3
PDGFA-204ENST00000405692 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.19■■□□□ 1.3
PDGFA-204ENST00000405692 ENPP3O14638 875 aa23.19■■□□□ 1.3
PDGFA-204ENST00000405692 DRP2Q13474 957 aa23.19■■□□□ 1.3
PDGFA-204ENST00000405692 Q7L0L9 218 aa23.19■■□□□ 1.3
PDGFA-204ENST00000405692 TMEM40Q8WWA1 233 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms