RNA–Protein interactions for RNA: ENST00000378518.5

RER1-204, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 3 BASIC

Gene RER1, Length 522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-204ENST00000378518 CEP89Q96ST8 783 aa22.33■■□□□ 1.17
RER1-204ENST00000378518 DDX19AQ9NUU7 478 aaKnown RBP22.33■■□□□ 1.17
RER1-204ENST00000378518 DBR1Q9UK59 544 aaKnown RBP22.33■■□□□ 1.17
RER1-204ENST00000378518 KIAA1024Q9UPX6 916 aa22.33■■□□□ 1.17
RER1-204ENST00000378518 ZDHHC9Q9Y397 364 aa22.33■■□□□ 1.17
RER1-204ENST00000378518 SRPRBQ9Y5M8 271 aaKnown RBP22.33■■□□□ 1.17
RER1-204ENST00000378518 CDY2AQ9Y6F7 541 aa22.33■■□□□ 1.17
RER1-204ENST00000378518 A0A1W2PPC1 479 aa22.32■■□□□ 1.16
RER1-204ENST00000378518 ZBTB39O15060 712 aa22.32■■□□□ 1.16
RER1-204ENST00000378518 SPTLC2O15270 562 aa22.32■■□□□ 1.16
RER1-204ENST00000378518 DGAT1O75907 488 aa22.32■■□□□ 1.16
RER1-204ENST00000378518 ACRP10323 421 aa22.32■■□□□ 1.16
RER1-204ENST00000378518 ACTN1P12814 892 aa22.32■■□□□ 1.16
RER1-204ENST00000378518 CDC25AP30304 524 aa22.32■■□□□ 1.16
RER1-204ENST00000378518 MGAT3Q09327 533 aa22.32■■□□□ 1.16
RER1-204ENST00000378518 TMEM62Q0P6H9 643 aa22.32■■□□□ 1.16
RER1-204ENST00000378518 ZRSR1Q15695 479 aaKnown RBP22.32■■□□□ 1.16
RER1-204ENST00000378518 KCTD17Q8N5Z5 321 aa22.32■■□□□ 1.16
RER1-204ENST00000378518 LINC01465Q8N7H1 131 aa22.32■■□□□ 1.16
RER1-204ENST00000378518 RASSF8Q8NHQ8 419 aa22.32■■□□□ 1.16
RER1-204ENST00000378518 CALML4Q96GE6 196 aa22.32■■□□□ 1.16
RER1-204ENST00000378518 MTRQ99707 1265 aa22.32■■□□□ 1.16
RER1-204ENST00000378518 MTIF3Q9H2K0 278 aaKnown RBP22.32■■□□□ 1.16
RER1-204ENST00000378518 DHX33Q9H6R0 707 aaKnown RBP22.32■■□□□ 1.16
RER1-204ENST00000378518 FBXO2Q9UK22 296 aaPredicted RBP22.32■■□□□ 1.16
RER1-204ENST00000378518 COLQQ9Y215 455 aaPredicted RBP22.32■■□□□ 1.16
RER1-204ENST00000378518 IGKV6-21A0A0C4DH24 114 aa22.31■■□□□ 1.16
RER1-204ENST00000378518 PPP6R2O75170 966 aa22.31■■□□□ 1.16
RER1-204ENST00000378518 FGBP02675 491 aa22.31■■□□□ 1.16
RER1-204ENST00000378518 CHRNA1P02708 482 aa22.31■■□□□ 1.16
RER1-204ENST00000378518 TXLNAP40222 546 aa22.31■■□□□ 1.16
RER1-204ENST00000378518 EPHB4P54760 987 aa22.31■■□□□ 1.16
RER1-204ENST00000378518 CDC42EP1Q00587 391 aa22.31■■□□□ 1.16
RER1-204ENST00000378518 DNM1Q05193 864 aaKnown RBP22.31■■□□□ 1.16
RER1-204ENST00000378518 EMC2Q15006 297 aa22.31■■□□□ 1.16
RER1-204ENST00000378518 TDHQ8IZJ6 230 aa22.31■■□□□ 1.16
RER1-204ENST00000378518 ZNF579Q8NAF0 562 aaKnown RBP22.31■■□□□ 1.16
RER1-204ENST00000378518 TCP11Q8WWU5 503 aa22.31■■□□□ 1.16
RER1-204ENST00000378518 MMTAG2Q9BU76 263 aaKnown RBP22.31■■□□□ 1.16
RER1-204ENST00000378518 CELF4Q9BZC1 486 aaKnown RBP22.31■■□□□ 1.16
RER1-204ENST00000378518 PRO3102Q9H379 93 aa22.31■■□□□ 1.16
RER1-204ENST00000378518 ATP6V0A4Q9HBG4 840 aa22.31■■□□□ 1.16
RER1-204ENST00000378518 DNM3Q9UQ16 869 aa22.31■■□□□ 1.16
RER1-204ENST00000378518 TCHHQ07283 1943 aa22.31■■□□□ 1.16
RER1-204ENST00000378518 ARHGEF35A5YM69 484 aa22.3■■□□□ 1.16
RER1-204ENST00000378518 NBNO60934 754 aa22.3■■□□□ 1.16
RER1-204ENST00000378518 CXCL10P02778 98 aa22.3■■□□□ 1.16
RER1-204ENST00000378518 VTNP04004 478 aa22.3■■□□□ 1.16
RER1-204ENST00000378518 NCLP19338 710 aaKnown RBP22.3■■□□□ 1.16
RER1-204ENST00000378518 KRT85P78386 507 aa22.3■■□□□ 1.16
RER1-204ENST00000378518 GRIN1Q05586 938 aa22.3■■□□□ 1.16
RER1-204ENST00000378518 HYIQ5T013 277 aa22.3■■□□□ 1.16
RER1-204ENST00000378518 ZNF365Q70YC5 407 aa22.3■■□□□ 1.16
RER1-204ENST00000378518 KCNG4Q8TDN1 519 aa22.3■■□□□ 1.16
RER1-204ENST00000378518 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.3■■□□□ 1.16
RER1-204ENST00000378518 CSRNP2Q9H175 543 aa22.3■■□□□ 1.16
RER1-204ENST00000378518 BMP2KQ9NSY1 1161 aaPredicted RBP22.3■■□□□ 1.16
RER1-204ENST00000378518 TET1Q8NFU7 2136 aa22.3■■□□□ 1.16
RER1-204ENST00000378518 A0A087WWV3 80 aa22.29■■□□□ 1.16
RER1-204ENST00000378518 MBTPS1Q14703 1052 aa22.29■■□□□ 1.16
RER1-204ENST00000378518 ECM1Q16610 540 aa22.29■■□□□ 1.16
RER1-204ENST00000378518 TMEM240Q5SV17 173 aa22.29■■□□□ 1.16
RER1-204ENST00000378518 CNKSR3Q6P9H4 555 aa22.29■■□□□ 1.16
RER1-204ENST00000378518 USP38Q8NB14 1042 aa22.29■■□□□ 1.16
RER1-204ENST00000378518 RNPC3Q96LT9 517 aaKnown RBP22.29■■□□□ 1.16
RER1-204ENST00000378518 SCLT1Q96NL6 688 aa22.29■■□□□ 1.16
RER1-204ENST00000378518 SUCLA2Q9P2R7 463 aaPredicted RBP22.29■■□□□ 1.16
RER1-204ENST00000378518 GINS2Q9Y248 185 aa22.29■■□□□ 1.16
RER1-204ENST00000378518 SQORQ9Y6N5 450 aa22.29■■□□□ 1.16
RER1-204ENST00000378518 USO1O60763 962 aaKnown RBP22.28■■□□□ 1.16
RER1-204ENST00000378518 EYA4O95677 639 aa22.28■■□□□ 1.16
RER1-204ENST00000378518 GHRP10912 638 aa22.28■■□□□ 1.16
RER1-204ENST00000378518 DDIT3P35638 169 aa22.28■■□□□ 1.16
RER1-204ENST00000378518 SHHQ15465 462 aa22.28■■□□□ 1.16
RER1-204ENST00000378518 FBXO47Q5MNV8 452 aa22.28■■□□□ 1.16
RER1-204ENST00000378518 C16orf59Q7L2K0 433 aa22.28■■□□□ 1.16
RER1-204ENST00000378518 MCPH1Q8NEM0 835 aa22.28■■□□□ 1.16
RER1-204ENST00000378518 PSPC1Q8WXF1 523 aaKnown RBP22.28■■□□□ 1.16
RER1-204ENST00000378518 SEPT8Q92599 483 aa22.28■■□□□ 1.16
RER1-204ENST00000378518 APBB2Q92870 758 aa22.28■■□□□ 1.16
RER1-204ENST00000378518 CLIC6Q96NY7 704 aa22.28■■□□□ 1.16
RER1-204ENST00000378518 PPP1R16BQ96T49 567 aa22.28■■□□□ 1.16
RER1-204ENST00000378518 CCSER1Q9C0I3 900 aa22.28■■□□□ 1.16
RER1-204ENST00000378518 BHMT2Q9H2M3 363 aa22.28■■□□□ 1.16
RER1-204ENST00000378518 CCDC39Q9UFE4 941 aa22.28■■□□□ 1.16
RER1-204ENST00000378518 MICAL3Q7RTP6 2002 aa22.28■■□□□ 1.16
RER1-204ENST00000378518 E9PMD0 336 aa22.27■■□□□ 1.16
RER1-204ENST00000378518 BAIAP3O94812 1187 aa22.27■■□□□ 1.16
RER1-204ENST00000378518 CRYBB1P53674 252 aaPredicted RBP22.27■■□□□ 1.16
RER1-204ENST00000378518 NLRP11P59045 1033 aaKnown RBP22.27■■□□□ 1.16
RER1-204ENST00000378518 GPNMBQ14956 572 aa22.27■■□□□ 1.16
RER1-204ENST00000378518 KIZQ2M2Z5 673 aa22.27■■□□□ 1.16
RER1-204ENST00000378518 ODR4Q5SWX8 454 aa22.27■■□□□ 1.16
RER1-204ENST00000378518 C9orf50Q5SZB4 431 aa22.27■■□□□ 1.16
RER1-204ENST00000378518 PADI6Q6TGC4 694 aa22.27■■□□□ 1.16
RER1-204ENST00000378518 TSHZ1Q6ZSZ6 1077 aa22.27■■□□□ 1.16
RER1-204ENST00000378518 OTOP2Q7RTS6 562 aa22.27■■□□□ 1.16
RER1-204ENST00000378518 RHPN2Q8IUC4 686 aa22.27■■□□□ 1.16
RER1-204ENST00000378518 NLRP7Q8WX94 980 aa22.27■■□□□ 1.16
RER1-204ENST00000378518 HERVK_113Q902F9 699 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms