RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 BEST2Q8NFU1 509 aa21.22■□□□□ 0.99
PCDH8-202ENST00000377942 KIAA0391O15091 583 aaKnown RBP21.21■□□□□ 0.99
PCDH8-202ENST00000377942 ECEL1O95672 775 aa21.21■□□□□ 0.99
PCDH8-202ENST00000377942 TBXAS1P24557 533 aaPredicted RBP21.21■□□□□ 0.99
PCDH8-202ENST00000377942 AP3M2P53677 418 aa21.21■□□□□ 0.99
PCDH8-202ENST00000377942 ANKRD20A3Q5VUR7 823 aa21.21■□□□□ 0.99
PCDH8-202ENST00000377942 ELMSAN1Q6PJG2 1045 aa21.21■□□□□ 0.99
PCDH8-202ENST00000377942 KIF2CQ99661 725 aa21.21■□□□□ 0.99
PCDH8-202ENST00000377942 JPH1Q9HDC5 661 aaPredicted RBP21.21■□□□□ 0.99
PCDH8-202ENST00000377942 SPTLC3Q9NUV7 552 aa21.21■□□□□ 0.99
PCDH8-202ENST00000377942 FBXO2Q9UK22 296 aaPredicted RBP21.21■□□□□ 0.99
PCDH8-202ENST00000377942 CTNND1O60716 968 aaKnown RBP21.21■□□□□ 0.99
PCDH8-202ENST00000377942 EFNA5P52803 228 aa21.21■□□□□ 0.99
PCDH8-202ENST00000377942 SNAPC2Q13487 334 aa21.21■□□□□ 0.99
PCDH8-202ENST00000377942 OR6B3Q8NGW1 331 aa21.21■□□□□ 0.99
PCDH8-202ENST00000377942 POLR3FQ9H1D9 316 aaPredicted RBP21.21■□□□□ 0.99
PCDH8-202ENST00000377942 PRR12Q9ULL5 1215 aa21.21■□□□□ 0.99
PCDH8-202ENST00000377942 KCTD17Q8N5Z5 321 aa21.21■□□□□ 0.99
PCDH8-202ENST00000377942 RNF139Q8WU17 664 aa21.21■□□□□ 0.99
PCDH8-202ENST00000377942 GCOM2Q9BZD3 368 aaPredicted RBP21.21■□□□□ 0.99
PCDH8-202ENST00000377942 SCARA5Q6ZMJ2 495 aa21.21■□□□□ 0.99
PCDH8-202ENST00000377942 FER1L4A9Z1Z3 1794 aa21.21■□□□□ 0.99
PCDH8-202ENST00000377942 ANTXR2P58335 489 aa21.2■□□□□ 0.98
PCDH8-202ENST00000377942 CPSF3Q9UKF6 684 aaKnown RBP21.2■□□□□ 0.98
PCDH8-202ENST00000377942 DIS3Q9Y2L1 958 aaKnown RBP21.2■□□□□ 0.98
PCDH8-202ENST00000377942 TWF2Q6IBS0 349 aaKnown RBP21.2■□□□□ 0.98
PCDH8-202ENST00000377942 THEM5Q8N1Q8 247 aa21.2■□□□□ 0.98
PCDH8-202ENST00000377942 GGA3Q9NZ52 723 aa21.2■□□□□ 0.98
PCDH8-202ENST00000377942 AFG3L2Q9Y4W6 797 aa21.2■□□□□ 0.98
PCDH8-202ENST00000377942 TRIM49BA6NDI0 452 aa21.2■□□□□ 0.98
PCDH8-202ENST00000377942 MOCS3O95396 460 aa21.2■□□□□ 0.98
PCDH8-202ENST00000377942 PFDN4Q9NQP4 134 aa21.2■□□□□ 0.98
PCDH8-202ENST00000377942 POLR1AO95602 1720 aaPredicted RBP21.2■□□□□ 0.98
PCDH8-202ENST00000377942 CASP1P29466 404 aa21.2■□□□□ 0.98
PCDH8-202ENST00000377942 ELF1P32519 619 aa21.2■□□□□ 0.98
PCDH8-202ENST00000377942 ARHGAP25P42331 645 aa21.2■□□□□ 0.98
PCDH8-202ENST00000377942 GPC3P51654 580 aa21.2■□□□□ 0.98
PCDH8-202ENST00000377942 VAMP7P51809 220 aa21.2■□□□□ 0.98
PCDH8-202ENST00000377942 EZH2Q15910 746 aaKnown RBP21.2■□□□□ 0.98
PCDH8-202ENST00000377942 ARL13BQ3SXY8 428 aa21.2■□□□□ 0.98
PCDH8-202ENST00000377942 SPATA24Q86W54 205 aa21.2■□□□□ 0.98
PCDH8-202ENST00000377942 PPP4R1Q8TF05 950 aa21.2■□□□□ 0.98
PCDH8-202ENST00000377942 MAD1L1Q9Y6D9 718 aa21.2■□□□□ 0.98
PCDH8-202ENST00000377942 CDC42EP1Q00587 391 aa21.19■□□□□ 0.98
PCDH8-202ENST00000377942 BIRC2Q13490 618 aa21.19■□□□□ 0.98
PCDH8-202ENST00000377942 ANKRD42Q8N9B4 389 aa21.19■□□□□ 0.98
PCDH8-202ENST00000377942 FAM213AQ9BRX8 229 aa21.19■□□□□ 0.98
PCDH8-202ENST00000377942 ZDHHC9Q9Y397 364 aa21.19■□□□□ 0.98
PCDH8-202ENST00000377942 SLC25A27O95847 323 aa21.19■□□□□ 0.98
PCDH8-202ENST00000377942 PTPN21Q16825 1174 aa21.19■□□□□ 0.98
PCDH8-202ENST00000377942 ZNF699Q32M78 642 aa21.19■□□□□ 0.98
PCDH8-202ENST00000377942 XRRA1Q6P2D8 792 aa21.19■□□□□ 0.98
PCDH8-202ENST00000377942 BZW1Q7L1Q6 419 aaKnown RBP21.19■□□□□ 0.98
PCDH8-202ENST00000377942 ENOSF1Q7L5Y1 443 aa21.19■□□□□ 0.98
PCDH8-202ENST00000377942 SDCCAG8Q86SQ7 713 aaPredicted RBP21.19■□□□□ 0.98
PCDH8-202ENST00000377942 KCTD6Q8NC69 237 aa21.19■□□□□ 0.98
PCDH8-202ENST00000377942 DONSONQ9NYP3 566 aa21.19■□□□□ 0.98
PCDH8-202ENST00000377942 PP2D1A8MPX8 630 aa21.19■□□□□ 0.98
PCDH8-202ENST00000377942 GCLMP48507 274 aa21.19■□□□□ 0.98
PCDH8-202ENST00000377942 EPHB4P54760 987 aa21.19■□□□□ 0.98
PCDH8-202ENST00000377942 YWHAGP61981 247 aaKnown RBP eCLIP21.19■□□□□ 0.98
PCDH8-202ENST00000377942 CYP27A1Q02318 531 aa21.19■□□□□ 0.98
PCDH8-202ENST00000377942 XKR3Q5GH77 459 aa21.19■□□□□ 0.98
PCDH8-202ENST00000377942 ESYT2A0FGR8 921 aa21.19■□□□□ 0.98
PCDH8-202ENST00000377942 ATP8B1O43520 1251 aa21.19■□□□□ 0.98
PCDH8-202ENST00000377942 RHPN2Q8IUC4 686 aa21.19■□□□□ 0.98
PCDH8-202ENST00000377942 FTCDO95954 541 aa21.18■□□□□ 0.98
PCDH8-202ENST00000377942 STAT5BP51692 787 aa21.18■□□□□ 0.98
PCDH8-202ENST00000377942 BAATQ14032 418 aaPredicted RBP21.18■□□□□ 0.98
PCDH8-202ENST00000377942 KRT39Q6A163 491 aa21.18■□□□□ 0.98
PCDH8-202ENST00000377942 COL23A1Q86Y22 540 aaPredicted RBP21.18■□□□□ 0.98
PCDH8-202ENST00000377942 EDEM3Q9BZQ6 932 aa21.18■□□□□ 0.98
PCDH8-202ENST00000377942 MKRN1Q9UHC7 482 aaKnown RBP21.18■□□□□ 0.98
PCDH8-202ENST00000377942 MIF4GDA9UHW6 222 aaKnown RBP21.18■□□□□ 0.98
PCDH8-202ENST00000377942 HUS1O60921 280 aa21.18■□□□□ 0.98
PCDH8-202ENST00000377942 HEXIM1O94992 359 aaKnown RBP21.18■□□□□ 0.98
PCDH8-202ENST00000377942 MUM1L1Q5H9M0 696 aa21.18■□□□□ 0.98
PCDH8-202ENST00000377942 CALN1Q9BXU9 219 aa21.18■□□□□ 0.98
PCDH8-202ENST00000377942 LRRD1A4D1F6 860 aa21.18■□□□□ 0.98
PCDH8-202ENST00000377942 MAFGO15525 162 aa21.18■□□□□ 0.98
PCDH8-202ENST00000377942 RWDD2BP57060 319 aa21.18■□□□□ 0.98
PCDH8-202ENST00000377942 KCND2Q9NZV8 630 aa21.18■□□□□ 0.98
PCDH8-202ENST00000377942 PDXKO00764 312 aa21.18■□□□□ 0.98
PCDH8-202ENST00000377942 TNPO2O14787 897 aaKnown RBP21.18■□□□□ 0.98
PCDH8-202ENST00000377942 PRR29P0C7W0 189 aa21.18■□□□□ 0.98
PCDH8-202ENST00000377942 HAUS6Q7Z4H7 955 aa21.18■□□□□ 0.98
PCDH8-202ENST00000377942 PARK7Q99497 189 aaKnown RBP21.18■□□□□ 0.98
PCDH8-202ENST00000377942 ADAM22Q9P0K1 906 aa21.18■□□□□ 0.98
PCDH8-202ENST00000377942 DGAT1O75907 488 aa21.17■□□□□ 0.98
PCDH8-202ENST00000377942 TXNP10599 105 aaKnown RBP21.17■□□□□ 0.98
PCDH8-202ENST00000377942 CCNYQ8ND76 341 aa21.17■□□□□ 0.98
PCDH8-202ENST00000377942 STRIP2Q9ULQ0 834 aa21.17■□□□□ 0.98
PCDH8-202ENST00000377942 GKAP1Q5VSY0 366 aaPredicted RBP21.17■□□□□ 0.98
PCDH8-202ENST00000377942 DEFB129Q9H1M3 183 aa21.17■□□□□ 0.98
PCDH8-202ENST00000377942 PPP2R5CQ13362 524 aa21.17■□□□□ 0.98
PCDH8-202ENST00000377942 MCUR1Q96AQ8 359 aa21.17■□□□□ 0.98
PCDH8-202ENST00000377942 MROH2AA6NES4 1674 aa21.17■□□□□ 0.98
PCDH8-202ENST00000377942 STXBP3O00186 592 aa21.17■□□□□ 0.98
PCDH8-202ENST00000377942 CALB1P05937 261 aa21.17■□□□□ 0.98
PCDH8-202ENST00000377942 CIITAP33076 1130 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms