RNA–Protein interactions for RNA: ENST00000377453.8

CLN5-201, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLN5, Length 2,629 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-201ENST00000377453 WHAMMQ8TF30 809 aa22.2■■□□□ 1.14
CLN5-201ENST00000377453 CRAMP1Q96RY5 1269 aa22.2■■□□□ 1.14
CLN5-201ENST00000377453 AMNQ9BXJ7 453 aa22.2■■□□□ 1.14
CLN5-201ENST00000377453 RABGAP1Q9Y3P9 1069 aa22.2■■□□□ 1.14
CLN5-201ENST00000377453 ZMYM2Q9UBW7 1377 aa22.2■■□□□ 1.14
CLN5-201ENST00000377453 SF3A3Q12874 501 aaKnown RBP eCLIP22.19■■□□□ 1.14
CLN5-201ENST00000377453 CHADLQ6NUI6 762 aa22.19■■□□□ 1.14
CLN5-201ENST00000377453 MREGQ8N565 214 aa22.19■■□□□ 1.14
CLN5-201ENST00000377453 ERMNQ8TAM6 284 aa22.19■■□□□ 1.14
CLN5-201ENST00000377453 TYW1Q9NV66 732 aaKnown RBP22.19■■□□□ 1.14
CLN5-201ENST00000377453 PDXKO00764 312 aa22.19■■□□□ 1.14
CLN5-201ENST00000377453 FLOT1O75955 427 aa22.19■■□□□ 1.14
CLN5-201ENST00000377453 ITGB3BPQ13352 177 aaPredicted RBP22.19■■□□□ 1.14
CLN5-201ENST00000377453 CBWD6Q4V339 395 aa22.19■■□□□ 1.14
CLN5-201ENST00000377453 CBWD3Q5JTY5 395 aa22.19■■□□□ 1.14
CLN5-201ENST00000377453 CBWD5Q5RIA9 395 aa22.19■■□□□ 1.14
CLN5-201ENST00000377453 RINT1Q6NUQ1 792 aa22.19■■□□□ 1.14
CLN5-201ENST00000377453 MAEAQ7L5Y9 396 aa22.19■■□□□ 1.14
CLN5-201ENST00000377453 ARHGEF26Q96DR7 871 aa22.19■■□□□ 1.14
CLN5-201ENST00000377453 DYDC2Q96IM9 177 aa22.19■■□□□ 1.14
CLN5-201ENST00000377453 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.19■■□□□ 1.14
CLN5-201ENST00000377453 TRPC5Q9UL62 973 aaPredicted RBP22.19■■□□□ 1.14
CLN5-201ENST00000377453 PPP1R9AQ9ULJ8 1098 aa22.19■■□□□ 1.14
CLN5-201ENST00000377453 BUB1BO60566 1050 aaPredicted RBP22.18■■□□□ 1.14
CLN5-201ENST00000377453 CTNNA1P35221 906 aaKnown RBP22.18■■□□□ 1.14
CLN5-201ENST00000377453 ZNF844Q08AG5 666 aa22.18■■□□□ 1.14
CLN5-201ENST00000377453 ARHGAP44Q17R89 818 aa22.18■■□□□ 1.14
CLN5-201ENST00000377453 NT5DC3Q86UY8 548 aa22.18■■□□□ 1.14
CLN5-201ENST00000377453 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.18■■□□□ 1.14
CLN5-201ENST00000377453 WDR18Q9BV38 432 aa22.18■■□□□ 1.14
CLN5-201ENST00000377453 H0YGN5 161 aa22.18■■□□□ 1.14
CLN5-201ENST00000377453 PTGISQ16647 500 aa22.18■■□□□ 1.14
CLN5-201ENST00000377453 ZNF473Q8WTR7 871 aaKnown RBP22.18■■□□□ 1.14
CLN5-201ENST00000377453 TMBIM4Q9HC24 238 aa22.18■■□□□ 1.14
CLN5-201ENST00000377453 WRAP73Q9P2S5 460 aaPredicted RBP22.18■■□□□ 1.14
CLN5-201ENST00000377453 NENFQ9UMX5 172 aa22.18■■□□□ 1.14
CLN5-201ENST00000377453 NFS1Q9Y697 457 aa22.18■■□□□ 1.14
CLN5-201ENST00000377453 THSD7AQ9UPZ6 1657 aa22.18■■□□□ 1.14
CLN5-201ENST00000377453 E7EVH7 732 aa22.17■■□□□ 1.14
CLN5-201ENST00000377453 PPP1R37O75864 691 aa22.17■■□□□ 1.14
CLN5-201ENST00000377453 INPP5BP32019 993 aa22.17■■□□□ 1.14
CLN5-201ENST00000377453 DCAF12L1Q5VU92 463 aa22.17■■□□□ 1.14
CLN5-201ENST00000377453 FAM186BQ8IYM0 893 aa22.17■■□□□ 1.14
CLN5-201ENST00000377453 ACTRT1Q8TDG2 376 aa22.17■■□□□ 1.14
CLN5-201ENST00000377453 STXBP5LQ9Y2K9 1186 aa22.17■■□□□ 1.14
CLN5-201ENST00000377453 A0A1W2PRG0 241 aa22.17■■□□□ 1.14
CLN5-201ENST00000377453 TISP43B9A030 160 aa22.17■■□□□ 1.14
CLN5-201ENST00000377453 MYO1FO00160 1098 aa22.17■■□□□ 1.14
CLN5-201ENST00000377453 FGGP02679 453 aa22.17■■□□□ 1.14
CLN5-201ENST00000377453 MDH1P40925 334 aaKnown RBP22.17■■□□□ 1.14
CLN5-201ENST00000377453 DRAP1Q14919 205 aaPredicted RBP22.17■■□□□ 1.14
CLN5-201ENST00000377453 Q4G0T1 1027 aa22.17■■□□□ 1.14
CLN5-201ENST00000377453 TBC1D10BQ4KMP7 808 aaPredicted RBP22.17■■□□□ 1.14
CLN5-201ENST00000377453 PBKQ96KB5 322 aa22.17■■□□□ 1.14
CLN5-201ENST00000377453 CNOT8Q9UFF9 292 aaKnown RBP22.17■■□□□ 1.14
CLN5-201ENST00000377453 UTRNP46939 3433 aa22.17■■□□□ 1.14
CLN5-201ENST00000377453 FAM13AO94988 1023 aa22.16■■□□□ 1.14
CLN5-201ENST00000377453 GH2P01242 217 aa22.16■■□□□ 1.14
CLN5-201ENST00000377453 SREBF1P36956 1147 aa22.16■■□□□ 1.14
CLN5-201ENST00000377453 PRKCIP41743 596 aa22.16■■□□□ 1.14
CLN5-201ENST00000377453 AP3B2Q13367 1082 aa22.16■■□□□ 1.14
CLN5-201ENST00000377453 SYDE2Q5VT97 1194 aa22.16■■□□□ 1.14
CLN5-201ENST00000377453 TRMT1LQ7Z2T5 733 aaKnown RBP22.16■■□□□ 1.14
CLN5-201ENST00000377453 DCAF4Q8WV16 495 aa22.16■■□□□ 1.14
CLN5-201ENST00000377453 NAP1L4Q99733 375 aaKnown RBP22.16■■□□□ 1.14
CLN5-201ENST00000377453 EPN3Q9H201 632 aa22.16■■□□□ 1.14
CLN5-201ENST00000377453 DNAJC12Q9UKB3 198 aa22.16■■□□□ 1.14
CLN5-201ENST00000377453 CFBP00751 764 aa22.16■■□□□ 1.14
CLN5-201ENST00000377453 UBAP2Q5T6F2 1119 aaKnown RBP22.16■■□□□ 1.14
CLN5-201ENST00000377453 CD302Q8IX05 232 aa22.16■■□□□ 1.14
CLN5-201ENST00000377453 SLC35G2Q8TBE7 412 aa22.16■■□□□ 1.14
CLN5-201ENST00000377453 CCT8L2Q96SF2 557 aa22.16■■□□□ 1.14
CLN5-201ENST00000377453 ERVK-5Q9HDB9 667 aa22.16■■□□□ 1.14
CLN5-201ENST00000377453 PKD2L1Q9P0L9 805 aa22.16■■□□□ 1.14
CLN5-201ENST00000377453 CAPN7Q9Y6W3 813 aa22.16■■□□□ 1.14
CLN5-201ENST00000377453 BTNL10A8MVZ5 291 aa22.15■■□□□ 1.14
CLN5-201ENST00000377453 ECE1P42892 770 aa22.15■■□□□ 1.14
CLN5-201ENST00000377453 KIAA1755Q5JYT7 1200 aa22.15■■□□□ 1.14
CLN5-201ENST00000377453 AEBP2Q6ZN18 517 aaPredicted RBP22.15■■□□□ 1.14
CLN5-201ENST00000377453 MYCBPAPQ8TBZ2 947 aa22.15■■□□□ 1.14
CLN5-201ENST00000377453 BORCS6Q96GS4 357 aa22.15■■□□□ 1.14
CLN5-201ENST00000377453 CCDC17Q96LX7 622 aa22.15■■□□□ 1.14
CLN5-201ENST00000377453 TMOD4Q9NZQ9 345 aa22.15■■□□□ 1.14
CLN5-201ENST00000377453 F8VZ95 297 aa22.15■■□□□ 1.14
CLN5-201ENST00000377453 RNF187Q5TA31 235 aaPredicted RBP22.15■■□□□ 1.14
CLN5-201ENST00000377453 CCDC174Q6PII3 467 aa22.15■■□□□ 1.14
CLN5-201ENST00000377453 NLRP14Q86W24 1093 aa22.15■■□□□ 1.14
CLN5-201ENST00000377453 SH2D3AQ9BRG2 576 aa22.15■■□□□ 1.14
CLN5-201ENST00000377453 NYAP2Q9P242 653 aa22.15■■□□□ 1.14
CLN5-201ENST00000377453 MKRN4PQ13434 485 aaPredicted RBP22.14■■□□□ 1.14
CLN5-201ENST00000377453 HHIPL2Q6UWX4 724 aa22.14■■□□□ 1.14
CLN5-201ENST00000377453 GLG1Q92896 1179 aa22.14■■□□□ 1.14
CLN5-201ENST00000377453 BZW2Q9Y6E2 419 aaKnown RBP22.14■■□□□ 1.14
CLN5-201ENST00000377453 GCOM1H8Y6P7 765 aaPredicted RBP22.14■■□□□ 1.13
CLN5-201ENST00000377453 DDX39AO00148 427 aaKnown RBP22.14■■□□□ 1.13
CLN5-201ENST00000377453 SLITRK3O94933 977 aa22.14■■□□□ 1.13
CLN5-201ENST00000377453 EYA4O95677 639 aa22.14■■□□□ 1.13
CLN5-201ENST00000377453 MYZAPP0CAP1 466 aa22.14■■□□□ 1.13
CLN5-201ENST00000377453 HOXA7P31268 230 aaPredicted RBP22.14■■□□□ 1.13
CLN5-201ENST00000377453 MKL1Q969V6 931 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms