RNA–Protein interactions for RNA: ENST00000376575.7

DDR1-228, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best) BASIC

Gene DDR1, Length 732 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-228ENST00000376575 BMP8BP34820 402 aa22.2■■□□□ 1.14
DDR1-228ENST00000376575 RFC2P35250 354 aa22.2■■□□□ 1.14
DDR1-228ENST00000376575 CCL23P55773 120 aa22.2■■□□□ 1.14
DDR1-228ENST00000376575 KRT85P78386 507 aa22.2■■□□□ 1.14
DDR1-228ENST00000376575 XKR9Q5GH70 373 aa22.2■■□□□ 1.14
DDR1-228ENST00000376575 KCNK18Q7Z418 384 aa22.2■■□□□ 1.14
DDR1-228ENST00000376575 RSPH3Q86UC2 560 aa22.2■■□□□ 1.14
DDR1-228ENST00000376575 CABP7Q86V35 215 aa22.2■■□□□ 1.14
DDR1-228ENST00000376575 TMEM199Q8N511 208 aa22.2■■□□□ 1.14
DDR1-228ENST00000376575 EPSTI1Q96J88 318 aa22.2■■□□□ 1.14
DDR1-228ENST00000376575 IPO9Q96P70 1041 aaKnown RBP22.2■■□□□ 1.14
DDR1-228ENST00000376575 JPH2Q9BR39 696 aaPredicted RBP22.2■■□□□ 1.14
DDR1-228ENST00000376575 NT5C3AQ9H0P0 336 aa22.2■■□□□ 1.14
DDR1-228ENST00000376575 DDX19AQ9NUU7 478 aaKnown RBP22.2■■□□□ 1.14
DDR1-228ENST00000376575 RSPH10B2B2RC85 870 aa22.19■■□□□ 1.14
DDR1-228ENST00000376575 DGAT1O75907 488 aa22.19■■□□□ 1.14
DDR1-228ENST00000376575 CXCL10P02778 98 aa22.19■■□□□ 1.14
DDR1-228ENST00000376575 RSPH10BP0C881 870 aa22.19■■□□□ 1.14
DDR1-228ENST00000376575 CSF2RAP15509 400 aa22.19■■□□□ 1.14
DDR1-228ENST00000376575 UBA7P41226 1012 aa22.19■■□□□ 1.14
DDR1-228ENST00000376575 MDM2Q00987 491 aaPredicted RBP22.19■■□□□ 1.14
DDR1-228ENST00000376575 DRP2Q13474 957 aa22.19■■□□□ 1.14
DDR1-228ENST00000376575 C16orf59Q7L2K0 433 aa22.19■■□□□ 1.14
DDR1-228ENST00000376575 LRRC71Q8N4P6 559 aa22.19■■□□□ 1.14
DDR1-228ENST00000376575 LRRC15Q8TF66 581 aa22.19■■□□□ 1.14
DDR1-228ENST00000376575 LEO1Q8WVC0 666 aaPredicted RBP22.19■■□□□ 1.14
DDR1-228ENST00000376575 SYMPKQ92797 1274 aaKnown RBP22.19■■□□□ 1.14
DDR1-228ENST00000376575 SCLYQ96I15 445 aa22.19■■□□□ 1.14
DDR1-228ENST00000376575 LBHD1Q9BQE6 289 aaPredicted RBP22.19■■□□□ 1.14
DDR1-228ENST00000376575 FAM49AQ9H0Q0 323 aaPredicted RBP22.19■■□□□ 1.14
DDR1-228ENST00000376575 XPNPEP1Q9NQW7 623 aa22.19■■□□□ 1.14
DDR1-228ENST00000376575 PCDHA7Q9UN72 937 aa22.19■■□□□ 1.14
DDR1-228ENST00000376575 GAS2O43903 313 aaKnown RBP22.18■■□□□ 1.14
DDR1-228ENST00000376575 CUTAO60888 179 aa22.18■■□□□ 1.14
DDR1-228ENST00000376575 NBNO60934 754 aa22.18■■□□□ 1.14
DDR1-228ENST00000376575 GPR32O75388 356 aa22.18■■□□□ 1.14
DDR1-228ENST00000376575 EYA4O95677 639 aa22.18■■□□□ 1.14
DDR1-228ENST00000376575 TMOD1P28289 359 aa22.18■■□□□ 1.14
DDR1-228ENST00000376575 CLCN3P51790 818 aa22.18■■□□□ 1.14
DDR1-228ENST00000376575 EPHB4P54760 987 aa22.18■■□□□ 1.14
DDR1-228ENST00000376575 MRPS6P82932 125 aaKnown RBP22.18■■□□□ 1.14
DDR1-228ENST00000376575 FPGSQ05932 587 aa22.18■■□□□ 1.14
DDR1-228ENST00000376575 SPECC1Q5M775 1068 aa22.18■■□□□ 1.14
DDR1-228ENST00000376575 PRPF38BQ5VTL8 546 aaKnown RBP22.18■■□□□ 1.14
DDR1-228ENST00000376575 IER5Q5VY09 327 aa22.18■■□□□ 1.14
DDR1-228ENST00000376575 ZNF710Q8N1W2 664 aa22.18■■□□□ 1.14
DDR1-228ENST00000376575 METTL13Q8N6R0 699 aa22.18■■□□□ 1.14
DDR1-228ENST00000376575 SLC7A3Q8WY07 619 aa22.18■■□□□ 1.14
DDR1-228ENST00000376575 SCAND2PQ9GZW5 306 aaPredicted RBP22.18■■□□□ 1.14
DDR1-228ENST00000376575 DNM3Q9UQ16 869 aa22.18■■□□□ 1.14
DDR1-228ENST00000376575 E9PMD0 336 aa22.17■■□□□ 1.14
DDR1-228ENST00000376575 PPIGQ13427 754 aaKnown RBP eCLIP22.17■■□□□ 1.142e-6■■■□□ 16.6
DDR1-228ENST00000376575 OSBPL7Q9BZF2 842 aa22.17■■□□□ 1.14
DDR1-228ENST00000376575 BHMT2Q9H2M3 363 aa22.17■■□□□ 1.14
DDR1-228ENST00000376575 SUGCTQ9HAC7 445 aa22.17■■□□□ 1.14
DDR1-228ENST00000376575 IL23AQ9NPF7 189 aa22.17■■□□□ 1.14
DDR1-228ENST00000376575 CHMP5Q9NZZ3 219 aa22.17■■□□□ 1.14
DDR1-228ENST00000376575 SQORQ9Y6N5 450 aa22.17■■□□□ 1.14
DDR1-228ENST00000376575 PFKMP08237 780 aa22.16■■□□□ 1.14
DDR1-228ENST00000376575 POLGP54098 1239 aaPredicted RBP22.16■■□□□ 1.14
DDR1-228ENST00000376575 EMC2Q15006 297 aa22.16■■□□□ 1.14
DDR1-228ENST00000376575 KARSQ15046 597 aaKnown RBP22.16■■□□□ 1.14
DDR1-228ENST00000376575 SHC4Q6S5L8 630 aa22.16■■□□□ 1.14
DDR1-228ENST00000376575 CALML4Q96GE6 196 aa22.16■■□□□ 1.14
DDR1-228ENST00000376575 CELF4Q9BZC1 486 aaKnown RBP22.16■■□□□ 1.14
DDR1-228ENST00000376575 ADAMTS10Q9H324 1103 aa22.16■■□□□ 1.14
DDR1-228ENST00000376575 BLOC1S4Q9NUP1 217 aa22.16■■□□□ 1.14
DDR1-228ENST00000376575 TRPV2Q9Y5S1 764 aa22.16■■□□□ 1.14
DDR1-228ENST00000376575 CDY2AQ9Y6F7 541 aa22.16■■□□□ 1.14
DDR1-228ENST00000376575 VTNP04004 478 aa22.15■■□□□ 1.14
DDR1-228ENST00000376575 CTSHP09668 335 aa22.15■■□□□ 1.14
DDR1-228ENST00000376575 CYP11B2P19099 503 aa22.15■■□□□ 1.14
DDR1-228ENST00000376575 CDC42EP1Q00587 391 aa22.15■■□□□ 1.14
DDR1-228ENST00000376575 PADI6Q6TGC4 694 aa22.15■■□□□ 1.14
DDR1-228ENST00000376575 RPUSD2Q8IZ73 545 aaKnown RBP22.15■■□□□ 1.14
DDR1-228ENST00000376575 SYT2Q8N9I0 419 aaPredicted RBP22.15■■□□□ 1.14
DDR1-228ENST00000376575 SPATA32Q96LK8 384 aa22.15■■□□□ 1.14
DDR1-228ENST00000376575 MAP7D2Q96T17 732 aa22.15■■□□□ 1.14
DDR1-228ENST00000376575 MTRQ99707 1265 aa22.15■■□□□ 1.14
DDR1-228ENST00000376575 ATP6V0A4Q9HBG4 840 aa22.15■■□□□ 1.14
DDR1-228ENST00000376575 ARHGEF35A5YM69 484 aa22.14■■□□□ 1.13
DDR1-228ENST00000376575 PLCG1P19174 1290 aa22.14■■□□□ 1.13
DDR1-228ENST00000376575 ARL2P36404 184 aa22.14■■□□□ 1.13
DDR1-228ENST00000376575 ME1P48163 572 aa22.14■■□□□ 1.13
DDR1-228ENST00000376575 DNM2P50570 870 aa22.14■■□□□ 1.13
DDR1-228ENST00000376575 GPC3P51654 580 aa22.14■■□□□ 1.13
DDR1-228ENST00000376575 SLC12A3P55017 1021 aa22.14■■□□□ 1.13
DDR1-228ENST00000376575 TMEM62Q0P6H9 643 aa22.14■■□□□ 1.13
DDR1-228ENST00000376575 NAALADL2Q58DX5 795 aa22.14■■□□□ 1.13
DDR1-228ENST00000376575 FBXO47Q5MNV8 452 aa22.14■■□□□ 1.13
DDR1-228ENST00000376575 CDK5RAP3Q96JB5 506 aa22.14■■□□□ 1.13
DDR1-228ENST00000376575 CDHR5Q9HBB8 845 aa22.14■■□□□ 1.13
DDR1-228ENST00000376575 SUCLA2Q9P2R7 463 aaPredicted RBP22.14■■□□□ 1.13
DDR1-228ENST00000376575 A0A087X0B3 334 aa22.13■■□□□ 1.13
DDR1-228ENST00000376575 CRYBB1P53674 252 aaPredicted RBP22.13■■□□□ 1.13
DDR1-228ENST00000376575 LPIN1Q14693 890 aa22.13■■□□□ 1.13
DDR1-228ENST00000376575 ZRSR1Q15695 479 aaKnown RBP22.13■■□□□ 1.13
DDR1-228ENST00000376575 PLEKHG4Q58EX7 1191 aa22.13■■□□□ 1.13
DDR1-228ENST00000376575 TMEM240Q5SV17 173 aa22.13■■□□□ 1.13
DDR1-228ENST00000376575 RESP18Q5W5W9 173 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms