RNA–Protein interactions for RNA: ENST00000374688.5

TMEM38B-201, Transcript of transmembrane protein 38B, humanhuman

TSL 2 BASIC

Gene TMEM38B, Length 3,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38B-201ENST00000374688 TBX2Q13207 712 aaPredicted RBP4.28□□□□□ -1.72
TMEM38B-201ENST00000374688 MTMR3Q13615 1198 aa4.28□□□□□ -1.72
TMEM38B-201ENST00000374688 CLUL1Q15846 466 aa4.28□□□□□ -1.72
TMEM38B-201ENST00000374688 TAF12Q16514 161 aa4.28□□□□□ -1.72
TMEM38B-201ENST00000374688 ARSHQ5FYA8 562 aa4.28□□□□□ -1.72
TMEM38B-201ENST00000374688 PPP1R42Q7Z4L9 355 aa4.28□□□□□ -1.72
TMEM38B-201ENST00000374688 VSIG1Q86XK7 387 aa4.28□□□□□ -1.72
TMEM38B-201ENST00000374688 PALM2Q8IXS6 379 aa4.28□□□□□ -1.72
TMEM38B-201ENST00000374688 OR6C4Q8NGE1 309 aa4.28□□□□□ -1.72
TMEM38B-201ENST00000374688 NSUN6Q8TEA1 469 aaKnown RBP4.28□□□□□ -1.72
TMEM38B-201ENST00000374688 SGK3Q96BR1 496 aa4.28□□□□□ -1.72
TMEM38B-201ENST00000374688 TTC1Q99614 292 aa4.28□□□□□ -1.72
TMEM38B-201ENST00000374688 COQ7Q99807 217 aa4.28□□□□□ -1.72
TMEM38B-201ENST00000374688 DDX50Q9BQ39 737 aaKnown RBP4.28□□□□□ -1.72
TMEM38B-201ENST00000374688 SDF4Q9BRK5 362 aa4.28□□□□□ -1.72
TMEM38B-201ENST00000374688 CCDC106Q9BWC9 280 aa4.28□□□□□ -1.72
TMEM38B-201ENST00000374688 LSM14BQ9BX40 385 aaKnown RBP4.28□□□□□ -1.72
TMEM38B-201ENST00000374688 OSBPL1AQ9BXW6 950 aa4.28□□□□□ -1.72
TMEM38B-201ENST00000374688 ACTR5Q9H9F9 607 aaPredicted RBP4.28□□□□□ -1.72
TMEM38B-201ENST00000374688 NCOA5Q9HCD5 579 aaKnown RBP4.28□□□□□ -1.72
TMEM38B-201ENST00000374688 MRPL40Q9NQ50 206 aaKnown RBP4.28□□□□□ -1.72
TMEM38B-201ENST00000374688 EHD2Q9NZN4 543 aa4.28□□□□□ -1.72
TMEM38B-201ENST00000374688 SUCLA2Q9P2R7 463 aaPredicted RBP4.28□□□□□ -1.72
TMEM38B-201ENST00000374688 DDX19BQ9UMR2 479 aa4.28□□□□□ -1.72
TMEM38B-201ENST00000374688 CD2APQ9Y5K6 639 aa4.28□□□□□ -1.72
TMEM38B-201ENST00000374688 SOWAHBA6NEL2 793 aa4.28□□□□□ -1.72
TMEM38B-201ENST00000374688 MAP2K7O14733 419 aa4.28□□□□□ -1.72
TMEM38B-201ENST00000374688 SLC7A4O43246 635 aa4.28□□□□□ -1.72
TMEM38B-201ENST00000374688 LZTS3O60299 673 aaPredicted RBP4.28□□□□□ -1.72
TMEM38B-201ENST00000374688 RNF40O75150 1001 aa4.28□□□□□ -1.72
TMEM38B-201ENST00000374688 PENKP01210 267 aaPredicted RBP4.28□□□□□ -1.72
TMEM38B-201ENST00000374688 MYBL1P10243 752 aa4.28□□□□□ -1.72
TMEM38B-201ENST00000374688 GDI1P31150 447 aa4.28□□□□□ -1.72
TMEM38B-201ENST00000374688 ETFBP38117 255 aa4.28□□□□□ -1.72
TMEM38B-201ENST00000374688 B2MP61769 119 aa4.28□□□□□ -1.72
TMEM38B-201ENST00000374688 BEX3Q00994 111 aa4.28□□□□□ -1.72
TMEM38B-201ENST00000374688 ITKQ08881 620 aa4.28□□□□□ -1.72
TMEM38B-201ENST00000374688 PKP1Q13835 747 aa4.28□□□□□ -1.72
TMEM38B-201ENST00000374688 PDE3AQ14432 1141 aa4.28□□□□□ -1.72
TMEM38B-201ENST00000374688 HLTFQ14527 1009 aaKnown RBP eCLIP4.28□□□□□ -1.72
TMEM38B-201ENST00000374688 CCDC62Q6P9F0 684 aa4.28□□□□□ -1.72
TMEM38B-201ENST00000374688 LRRC8AQ8IWT6 810 aa4.28□□□□□ -1.72
TMEM38B-201ENST00000374688 FAM20CQ8IXL6 584 aa4.28□□□□□ -1.72
TMEM38B-201ENST00000374688 SCYL3Q8IZE3 742 aa4.28□□□□□ -1.72
TMEM38B-201ENST00000374688 CCDC63Q8NA47 563 aa4.28□□□□□ -1.72
TMEM38B-201ENST00000374688 EHBP1Q8NDI1 1231 aa4.28□□□□□ -1.72
TMEM38B-201ENST00000374688 ABTB1Q969K4 478 aaPredicted RBP4.28□□□□□ -1.72
TMEM38B-201ENST00000374688 PPP2R3CQ969Q6 453 aa4.28□□□□□ -1.72
TMEM38B-201ENST00000374688 SNX27Q96L92 541 aa4.28□□□□□ -1.72
TMEM38B-201ENST00000374688 SMC6Q96SB8 1091 aa4.28□□□□□ -1.72
TMEM38B-201ENST00000374688 ATAD3AQ9NVI7 634 aa4.28□□□□□ -1.72
TMEM38B-201ENST00000374688 NOP53Q9NZM5 478 aaKnown RBP4.28□□□□□ -1.72
TMEM38B-201ENST00000374688 EPS15L1Q9UBC2 864 aa4.28□□□□□ -1.72
TMEM38B-201ENST00000374688 PNMA3Q9UL41 463 aa4.28□□□□□ -1.72
TMEM38B-201ENST00000374688 GRID1Q9ULK0 1009 aa4.28□□□□□ -1.72
TMEM38B-201ENST00000374688 ATXN2Q99700 1313 aaKnown RBP4.27□□□□□ -1.73
TMEM38B-201ENST00000374688 A6NNZ2 444 aa4.27□□□□□ -1.73
TMEM38B-201ENST00000374688 ASAP2O43150 1006 aa4.27□□□□□ -1.73
TMEM38B-201ENST00000374688 HOXC11O43248 304 aaPredicted RBP4.27□□□□□ -1.73
TMEM38B-201ENST00000374688 RASSF9O75901 435 aa4.27□□□□□ -1.73
TMEM38B-201ENST00000374688 OR5F1O95221 314 aa4.27□□□□□ -1.73
TMEM38B-201ENST00000374688 KCNH1O95259 989 aa4.27□□□□□ -1.73
TMEM38B-201ENST00000374688 LINGO3P0C6S8 592 aa4.27□□□□□ -1.73
TMEM38B-201ENST00000374688 IDO1P14902 403 aa4.27□□□□□ -1.73
TMEM38B-201ENST00000374688 ATP5JP18859 108 aa4.27□□□□□ -1.73
TMEM38B-201ENST00000374688 ACAT1P24752 427 aaKnown RBP4.27□□□□□ -1.73
TMEM38B-201ENST00000374688 TARSP26639 723 aaKnown RBP4.27□□□□□ -1.73
TMEM38B-201ENST00000374688 SOX11P35716 441 aa4.27□□□□□ -1.73
TMEM38B-201ENST00000374688 PPP1R2P41236 205 aa4.27□□□□□ -1.73
TMEM38B-201ENST00000374688 ZAP70P43403 619 aa4.27□□□□□ -1.73
TMEM38B-201ENST00000374688 RXRGP48443 463 aa4.27□□□□□ -1.73
TMEM38B-201ENST00000374688 GNAQP50148 359 aa4.27□□□□□ -1.73
TMEM38B-201ENST00000374688 ZNF75DP51815 510 aa4.27□□□□□ -1.73
TMEM38B-201ENST00000374688 YARSP54577 528 aaKnown RBP4.27□□□□□ -1.73
TMEM38B-201ENST00000374688 TRPC3Q13507 836 aa4.27□□□□□ -1.73
TMEM38B-201ENST00000374688 BLMHQ13867 455 aa4.27□□□□□ -1.73
TMEM38B-201ENST00000374688 BYSLQ13895 437 aaKnown RBP4.27□□□□□ -1.73
TMEM38B-201ENST00000374688 DHX34Q14147 1143 aaKnown RBP4.27□□□□□ -1.73
TMEM38B-201ENST00000374688 SMAD1Q15797 465 aaKnown RBP4.27□□□□□ -1.73
TMEM38B-201ENST00000374688 TUBB8Q3ZCM7 444 aa4.27□□□□□ -1.73
TMEM38B-201ENST00000374688 CCDC14Q49A88 953 aa4.27□□□□□ -1.73
TMEM38B-201ENST00000374688 HECTD3Q5T447 861 aa4.27□□□□□ -1.73
TMEM38B-201ENST00000374688 RAB12Q6IQ22 244 aa4.27□□□□□ -1.73
TMEM38B-201ENST00000374688 PPP1R2P3Q6NXS1 205 aa4.27□□□□□ -1.73
TMEM38B-201ENST00000374688 PLEKHM3Q6ZWE6 761 aa4.27□□□□□ -1.73
TMEM38B-201ENST00000374688 HS2ST1Q7LGA3 356 aa4.27□□□□□ -1.73
TMEM38B-201ENST00000374688 SLC15A3Q8IY34 581 aa4.27□□□□□ -1.73
TMEM38B-201ENST00000374688 LRRN4CLQ8ND94 238 aa4.27□□□□□ -1.73
TMEM38B-201ENST00000374688 IL17RDQ8NFM7 739 aa4.27□□□□□ -1.73
TMEM38B-201ENST00000374688 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.27□□□□□ -1.73
TMEM38B-201ENST00000374688 ACSBG1Q96GR2 724 aa4.27□□□□□ -1.73
TMEM38B-201ENST00000374688 ZNF845Q96IR2 970 aaPredicted RBP4.27□□□□□ -1.73
TMEM38B-201ENST00000374688 PLIN2Q99541 437 aa4.27□□□□□ -1.73
TMEM38B-201ENST00000374688 PRPF18Q99633 342 aaKnown RBP4.27□□□□□ -1.73
TMEM38B-201ENST00000374688 TSEN34Q9BSV6 310 aaKnown RBP4.27□□□□□ -1.73
TMEM38B-201ENST00000374688 CYP4F12Q9HCS2 524 aa4.27□□□□□ -1.73
TMEM38B-201ENST00000374688 WDR6Q9NNW5 1121 aaKnown RBP4.27□□□□□ -1.73
TMEM38B-201ENST00000374688 CD93Q9NPY3 652 aa4.27□□□□□ -1.73
TMEM38B-201ENST00000374688 PFDN4Q9NQP4 134 aa4.27□□□□□ -1.73
TMEM38B-201ENST00000374688 DCTN4Q9UJW0 460 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms