RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 SMC1AQ14683 1233 aaKnown RBP17.5■□□□□ 0.39
CNKSR1-202ENST00000374253 UGCGQ16739 394 aa17.5■□□□□ 0.39
CNKSR1-202ENST00000374253 KIAA0753Q2KHM9 967 aa17.5■□□□□ 0.39
CNKSR1-202ENST00000374253 CREG2Q8IUH2 290 aa17.5■□□□□ 0.39
CNKSR1-202ENST00000374253 SYCP3Q8IZU3 236 aa17.5■□□□□ 0.39
CNKSR1-202ENST00000374253 SLC16A10Q8TF71 515 aa17.5■□□□□ 0.39
CNKSR1-202ENST00000374253 MS4A14Q96JA4 679 aa17.5■□□□□ 0.39
CNKSR1-202ENST00000374253 ALS2CR12Q96Q35 445 aa17.5■□□□□ 0.39
CNKSR1-202ENST00000374253 KIAA1683Q9H0B3 1180 aa17.5■□□□□ 0.39
CNKSR1-202ENST00000374253 ZHX1Q9UKY1 873 aaPredicted RBP17.5■□□□□ 0.39
CNKSR1-202ENST00000374253 MYH11P35749 1972 aa17.5■□□□□ 0.39
CNKSR1-202ENST00000374253 OAS2P29728 719 aaKnown RBP17.5■□□□□ 0.39
CNKSR1-202ENST00000374253 TNFAIP1Q13829 316 aa17.5■□□□□ 0.39
CNKSR1-202ENST00000374253 SLC18A3Q16572 532 aa17.5■□□□□ 0.39
CNKSR1-202ENST00000374253 OSBPL9Q96SU4 736 aa17.5■□□□□ 0.39
CNKSR1-202ENST00000374253 VPS33BQ9H267 617 aa17.5■□□□□ 0.39
CNKSR1-202ENST00000374253 PLEKHA4Q9H4M7 779 aa17.5■□□□□ 0.39
CNKSR1-202ENST00000374253 AGO4Q9HCK5 861 aaKnown RBP17.5■□□□□ 0.39
CNKSR1-202ENST00000374253 GPRC5CQ9NQ84 441 aa17.5■□□□□ 0.39
CNKSR1-202ENST00000374253 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.5■□□□□ 0.39
CNKSR1-202ENST00000374253 K7ENM7 598 aa17.49■□□□□ 0.39
CNKSR1-202ENST00000374253 PALMO75781 387 aa17.49■□□□□ 0.39
CNKSR1-202ENST00000374253 USP14P54578 494 aa17.49■□□□□ 0.39
CNKSR1-202ENST00000374253 RNASE9P60153 205 aaKnown RBP17.49■□□□□ 0.39
CNKSR1-202ENST00000374253 TGFB2P61812 414 aa17.49■□□□□ 0.39
CNKSR1-202ENST00000374253 MAPK7Q13164 816 aa17.49■□□□□ 0.39
CNKSR1-202ENST00000374253 GBP6Q6ZN66 633 aa17.49■□□□□ 0.39
CNKSR1-202ENST00000374253 IRF2BP2Q7Z5L9 587 aa17.49■□□□□ 0.39
CNKSR1-202ENST00000374253 NOX5Q96PH1 765 aa17.49■□□□□ 0.39
CNKSR1-202ENST00000374253 TRERF1Q96PN7 1200 aa17.49■□□□□ 0.39
CNKSR1-202ENST00000374253 RMDN3Q96TC7 470 aa17.49■□□□□ 0.39
CNKSR1-202ENST00000374253 NUCKS1Q9H1E3 243 aaKnown RBP17.49■□□□□ 0.39
CNKSR1-202ENST00000374253 SIX2Q9NPC8 291 aa17.49■□□□□ 0.39
CNKSR1-202ENST00000374253 AGPAT3Q9NRZ7 376 aa17.49■□□□□ 0.39
CNKSR1-202ENST00000374253 AIPL1Q9NZN9 384 aa17.49■□□□□ 0.39
CNKSR1-202ENST00000374253 POTEB2H3BUK9 544 aa17.49■□□□□ 0.39
CNKSR1-202ENST00000374253 ZNF280AP59817 542 aaPredicted RBP17.49■□□□□ 0.39
CNKSR1-202ENST00000374253 SP4Q02446 784 aa17.49■□□□□ 0.39
CNKSR1-202ENST00000374253 TERF2Q15554 542 aa17.49■□□□□ 0.39
CNKSR1-202ENST00000374253 CBWD6Q4V339 395 aa17.49■□□□□ 0.39
CNKSR1-202ENST00000374253 CBWD3Q5JTY5 395 aa17.49■□□□□ 0.39
CNKSR1-202ENST00000374253 CBWD5Q5RIA9 395 aa17.49■□□□□ 0.39
CNKSR1-202ENST00000374253 ZSWIM2Q8NEG5 633 aa17.49■□□□□ 0.39
CNKSR1-202ENST00000374253 HDAC7Q8WUI4 952 aa17.49■□□□□ 0.39
CNKSR1-202ENST00000374253 LPAR1Q92633 364 aa17.49■□□□□ 0.39
CNKSR1-202ENST00000374253 SYN2Q92777 582 aaPredicted RBP17.49■□□□□ 0.39
CNKSR1-202ENST00000374253 RIT2Q99578 217 aa17.49■□□□□ 0.39
CNKSR1-202ENST00000374253 TLR10Q9BXR5 811 aa17.49■□□□□ 0.39
CNKSR1-202ENST00000374253 PPP1R9AQ9ULJ8 1098 aa17.49■□□□□ 0.39
CNKSR1-202ENST00000374253 RPTORQ8N122 1335 aa17.48■□□□□ 0.39
CNKSR1-202ENST00000374253 H3BQF6 201 aa17.48■□□□□ 0.39
CNKSR1-202ENST00000374253 PJA2O43164 708 aa17.48■□□□□ 0.39
CNKSR1-202ENST00000374253 PSMC2P35998 433 aaKnown RBP17.48■□□□□ 0.39
CNKSR1-202ENST00000374253 PLA2G4FQ68DD2 849 aa17.48■□□□□ 0.39
CNKSR1-202ENST00000374253 IQCEQ6IPM2 695 aa17.48■□□□□ 0.39
CNKSR1-202ENST00000374253 ZNF771Q7L3S4 317 aaPredicted RBP17.48■□□□□ 0.39
CNKSR1-202ENST00000374253 HS2ST1Q7LGA3 356 aa17.48■□□□□ 0.39
CNKSR1-202ENST00000374253 BORCS6Q96GS4 357 aa17.48■□□□□ 0.39
CNKSR1-202ENST00000374253 WRNIP1Q96S55 665 aa17.48■□□□□ 0.39
CNKSR1-202ENST00000374253 GBP3Q9H0R5 595 aa17.48■□□□□ 0.39
CNKSR1-202ENST00000374253 PDE11AQ9HCR9 933 aa17.48■□□□□ 0.39
CNKSR1-202ENST00000374253 TELO2Q9Y4R8 837 aa17.48■□□□□ 0.39
CNKSR1-202ENST00000374253 RBAK-RBAKDNI3L0D1 243 aa17.48■□□□□ 0.39
CNKSR1-202ENST00000374253 EIF3DO15371 548 aaKnown RBP eCLIP17.48■□□□□ 0.39
CNKSR1-202ENST00000374253 CTNND1O60716 968 aaKnown RBP17.48■□□□□ 0.39
CNKSR1-202ENST00000374253 N4BP1O75113 896 aaKnown RBP17.48■□□□□ 0.39
CNKSR1-202ENST00000374253 LRRN2O75325 713 aa17.48■□□□□ 0.39
CNKSR1-202ENST00000374253 GFPT2O94808 682 aa17.48■□□□□ 0.39
CNKSR1-202ENST00000374253 ZNF131P52739 623 aa17.48■□□□□ 0.39
CNKSR1-202ENST00000374253 HMGCS2P54868 508 aa17.48■□□□□ 0.39
CNKSR1-202ENST00000374253 NPEPPSP55786 919 aa17.48■□□□□ 0.39
CNKSR1-202ENST00000374253 CKAP4Q07065 602 aaKnown RBP17.48■□□□□ 0.39
CNKSR1-202ENST00000374253 PGM5Q15124 567 aa17.48■□□□□ 0.39
CNKSR1-202ENST00000374253 KCTD19Q17RG1 926 aaPredicted RBP17.48■□□□□ 0.39
CNKSR1-202ENST00000374253 DLK2Q6UY11 383 aa17.48■□□□□ 0.39
CNKSR1-202ENST00000374253 MCF2L2Q86YR7 1114 aa17.48■□□□□ 0.39
CNKSR1-202ENST00000374253 METTL14Q9HCE5 456 aaKnown RBP17.48■□□□□ 0.39
CNKSR1-202ENST00000374253 SLC16A3O15427 465 aaKnown RBP17.47■□□□□ 0.39
CNKSR1-202ENST00000374253 EXOC3O60645 756 aa17.47■□□□□ 0.39
CNKSR1-202ENST00000374253 ERLIN1O75477 346 aa17.47■□□□□ 0.39
CNKSR1-202ENST00000374253 MYBL2P10244 700 aa17.47■□□□□ 0.39
CNKSR1-202ENST00000374253 SLC7A5Q01650 507 aa17.47■□□□□ 0.39
CNKSR1-202ENST00000374253 ANGEL2Q5VTE6 544 aaKnown RBP17.47■□□□□ 0.39
CNKSR1-202ENST00000374253 RNF207Q6ZRF8 634 aa17.47■□□□□ 0.39
CNKSR1-202ENST00000374253 L1RE1Q9UN81 338 aa17.47■□□□□ 0.39
CNKSR1-202ENST00000374253 UBIAD1Q9Y5Z9 338 aa17.47■□□□□ 0.39
CNKSR1-202ENST00000374253 P4HBP07237 508 aaKnown RBP17.47■□□□□ 0.39
CNKSR1-202ENST00000374253 BAATQ14032 418 aaPredicted RBP17.47■□□□□ 0.39
CNKSR1-202ENST00000374253 PCNX4Q63HM2 1172 aa17.47■□□□□ 0.39
CNKSR1-202ENST00000374253 CCDC43Q96MW1 224 aaKnown RBP17.47■□□□□ 0.39
CNKSR1-202ENST00000374253 PLCB1Q9NQ66 1216 aa17.47■□□□□ 0.39
CNKSR1-202ENST00000374253 VWA5AO00534 786 aa17.46■□□□□ 0.39
CNKSR1-202ENST00000374253 PEX10O60683 326 aa17.46■□□□□ 0.39
CNKSR1-202ENST00000374253 RARRES1P49788 294 aa17.46■□□□□ 0.39
CNKSR1-202ENST00000374253 SOX10P56693 466 aa17.46■□□□□ 0.39
CNKSR1-202ENST00000374253 DLG4P78352 724 aa17.46■□□□□ 0.39
CNKSR1-202ENST00000374253 GABPB1Q06547 395 aaPredicted RBP17.46■□□□□ 0.39
CNKSR1-202ENST00000374253 ARHGEF16Q5VV41 709 aa17.46■□□□□ 0.39
CNKSR1-202ENST00000374253 KIFC3Q9BVG8 833 aa17.46■□□□□ 0.39
CNKSR1-202ENST00000374253 ODF2LQ9ULJ1 636 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms