RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 IQCEQ6IPM2 695 aa20.5■□□□□ 0.87
USP49-202ENST00000373010 GSPT2Q8IYD1 628 aaKnown RBP20.5■□□□□ 0.87
USP49-202ENST00000373010 FTCDO95954 541 aa20.49■□□□□ 0.87
USP49-202ENST00000373010 DNA2P51530 1060 aa20.49■□□□□ 0.87
USP49-202ENST00000373010 GYS2P54840 703 aa20.49■□□□□ 0.87
USP49-202ENST00000373010 MRPS9P82933 396 aaKnown RBP20.49■□□□□ 0.87
USP49-202ENST00000373010 TKFCQ3LXA3 575 aa20.49■□□□□ 0.87
USP49-202ENST00000373010 SPATA4Q8NEY3 305 aa20.49■□□□□ 0.87
USP49-202ENST00000373010 TAOK3Q9H2K8 898 aa20.49■□□□□ 0.87
USP49-202ENST00000373010 AGPAT3Q9NRZ7 376 aa20.49■□□□□ 0.87
USP49-202ENST00000373010 N4BP1O75113 896 aaKnown RBP20.49■□□□□ 0.87
USP49-202ENST00000373010 BCRP11274 1271 aa20.49■□□□□ 0.87
USP49-202ENST00000373010 GUCY2CP25092 1073 aa20.49■□□□□ 0.87
USP49-202ENST00000373010 BAG6P46379 1132 aa20.49■□□□□ 0.87
USP49-202ENST00000373010 MRPS25P82663 173 aaKnown RBP20.49■□□□□ 0.87
USP49-202ENST00000373010 CCDC181Q5TID7 509 aa20.49■□□□□ 0.87
USP49-202ENST00000373010 PADI6Q6TGC4 694 aa20.49■□□□□ 0.87
USP49-202ENST00000373010 ZNF572Q7Z3I7 529 aaPredicted RBP20.49■□□□□ 0.87
USP49-202ENST00000373010 MMGT1Q8N4V1 131 aa20.49■□□□□ 0.87
USP49-202ENST00000373010 SYTL5Q8TDW5 730 aaPredicted RBP20.49■□□□□ 0.87
USP49-202ENST00000373010 KIAA1683Q9H0B3 1180 aa20.49■□□□□ 0.87
USP49-202ENST00000373010 KCND2Q9NZV8 630 aa20.49■□□□□ 0.87
USP49-202ENST00000373010 FLOT1O75955 427 aa20.48■□□□□ 0.87
USP49-202ENST00000373010 MYBL2P10244 700 aa20.48■□□□□ 0.87
USP49-202ENST00000373010 EIF2AK2P19525 551 aaKnown RBP20.48■□□□□ 0.87
USP49-202ENST00000373010 NFIL3Q16649 462 aa20.48■□□□□ 0.87
USP49-202ENST00000373010 HS2ST1Q7LGA3 356 aa20.48■□□□□ 0.87
USP49-202ENST00000373010 MCF2L2Q86YR7 1114 aa20.48■□□□□ 0.87
USP49-202ENST00000373010 HDAC7Q8WUI4 952 aa20.48■□□□□ 0.87
USP49-202ENST00000373010 LPAR1Q92633 364 aa20.48■□□□□ 0.87
USP49-202ENST00000373010 MS4A14Q96JA4 679 aa20.48■□□□□ 0.87
USP49-202ENST00000373010 TAAR1Q96RJ0 339 aa20.48■□□□□ 0.87
USP49-202ENST00000373010 SLC38A10Q9HBR0 1119 aa20.48■□□□□ 0.87
USP49-202ENST00000373010 AGO4Q9HCK5 861 aaKnown RBP20.48■□□□□ 0.87
USP49-202ENST00000373010 UBIAD1Q9Y5Z9 338 aa20.48■□□□□ 0.87
USP49-202ENST00000373010 LOXHD1Q8IVV2 1947 aa20.48■□□□□ 0.87
USP49-202ENST00000373010 JAM2P57087 298 aa20.48■□□□□ 0.87
USP49-202ENST00000373010 SH2D3AQ9BRG2 576 aa20.48■□□□□ 0.87
USP49-202ENST00000373010 LRRC1Q9BTT6 524 aa20.48■□□□□ 0.87
USP49-202ENST00000373010 SAMM50Q9Y512 469 aa20.48■□□□□ 0.87
USP49-202ENST00000373010 ZHX2Q9Y6X8 837 aa20.48■□□□□ 0.87
USP49-202ENST00000373010 UBE4BO95155 1302 aa20.48■□□□□ 0.87
USP49-202ENST00000373010 TRIM49P0CI25 452 aa20.47■□□□□ 0.87
USP49-202ENST00000373010 TRIM49CP0CI26 452 aa20.47■□□□□ 0.87
USP49-202ENST00000373010 MCM3P25205 808 aa20.47■□□□□ 0.87
USP49-202ENST00000373010 SF3B2Q13435 895 aaKnown RBP20.47■□□□□ 0.87
USP49-202ENST00000373010 MTMR2Q13614 643 aa20.47■□□□□ 0.87
USP49-202ENST00000373010 STXBP4Q6ZWJ1 553 aa20.47■□□□□ 0.87
USP49-202ENST00000373010 SAMD7Q7Z3H4 446 aa20.47■□□□□ 0.87
USP49-202ENST00000373010 SLC16A10Q8TF71 515 aa20.47■□□□□ 0.87
USP49-202ENST00000373010 GDAP1L1Q96MZ0 367 aa20.47■□□□□ 0.87
USP49-202ENST00000373010 DMAC2Q9NW81 257 aa20.47■□□□□ 0.87
USP49-202ENST00000373010 PACSIN2Q9UNF0 486 aaPredicted RBP20.47■□□□□ 0.87
USP49-202ENST00000373010 GTPBP10A4D1E9 387 aaKnown RBP20.47■□□□□ 0.87
USP49-202ENST00000373010 PPP1R12BO60237 982 aaPredicted RBP20.47■□□□□ 0.87
USP49-202ENST00000373010 ZBTB7AO95365 584 aa20.47■□□□□ 0.87
USP49-202ENST00000373010 P4HBP07237 508 aaKnown RBP20.47■□□□□ 0.87
USP49-202ENST00000373010 TNNT3P45378 269 aaPredicted RBP20.47■□□□□ 0.87
USP49-202ENST00000373010 SPP2Q13103 211 aa20.47■□□□□ 0.87
USP49-202ENST00000373010 TNIP1Q15025 636 aa20.47■□□□□ 0.87
USP49-202ENST00000373010 DALRD3Q5D0E6 543 aaKnown RBP20.47■□□□□ 0.87
USP49-202ENST00000373010 PCNX4Q63HM2 1172 aa20.47■□□□□ 0.87
USP49-202ENST00000373010 SYCP3Q8IZU3 236 aa20.47■□□□□ 0.87
USP49-202ENST00000373010 NEK9Q8TD19 979 aa20.47■□□□□ 0.87
USP49-202ENST00000373010 FBXL5Q9UKA1 691 aa20.47■□□□□ 0.87
USP49-202ENST00000373010 BZW2Q9Y6E2 419 aaKnown RBP20.47■□□□□ 0.87
USP49-202ENST00000373010 EIF3JO75822 258 aaKnown RBP20.46■□□□□ 0.87
USP49-202ENST00000373010 VCAM1P19320 739 aa20.46■□□□□ 0.87
USP49-202ENST00000373010 PRKCIP41743 596 aa20.46■□□□□ 0.87
USP49-202ENST00000373010 FMO5P49326 533 aa20.46■□□□□ 0.87
USP49-202ENST00000373010 ZNF280AP59817 542 aaPredicted RBP20.46■□□□□ 0.87
USP49-202ENST00000373010 RPS6P62753 249 aaKnown RBP20.46■□□□□ 0.87
USP49-202ENST00000373010 ITIH3Q06033 890 aa20.46■□□□□ 0.87
USP49-202ENST00000373010 NIPA1Q7RTP0 329 aa20.46■□□□□ 0.87
USP49-202ENST00000373010 RDH13Q8NBN7 331 aa20.46■□□□□ 0.87
USP49-202ENST00000373010 MKNK1Q9BUB5 465 aa20.46■□□□□ 0.87
USP49-202ENST00000373010 STRA6Q9BX79 667 aa20.46■□□□□ 0.87
USP49-202ENST00000373010 DMGDHQ9UI17 866 aaKnown RBP20.46■□□□□ 0.87
USP49-202ENST00000373010 NAGPAQ9UK23 515 aa20.46■□□□□ 0.87
USP49-202ENST00000373010 FRMD4BQ9Y2L6 1034 aa20.46■□□□□ 0.87
USP49-202ENST00000373010 PCDHGC5Q9Y5F6 944 aa20.46■□□□□ 0.87
USP49-202ENST00000373010 GRID2IPA4D2P6 1211 aa20.46■□□□□ 0.87
USP49-202ENST00000373010 TMEM150BA6NC51 233 aa20.46■□□□□ 0.87
USP49-202ENST00000373010 K7ENM7 598 aa20.46■□□□□ 0.87
USP49-202ENST00000373010 NFKBIEO00221 500 aa20.46■□□□□ 0.87
USP49-202ENST00000373010 PPP1R37O75864 691 aa20.46■□□□□ 0.87
USP49-202ENST00000373010 MTMR1Q13613 665 aa20.46■□□□□ 0.87
USP49-202ENST00000373010 TNFAIP1Q13829 316 aa20.46■□□□□ 0.87
USP49-202ENST00000373010 CBWD6Q4V339 395 aa20.46■□□□□ 0.87
USP49-202ENST00000373010 CBWD3Q5JTY5 395 aa20.46■□□□□ 0.87
USP49-202ENST00000373010 CBWD5Q5RIA9 395 aa20.46■□□□□ 0.87
USP49-202ENST00000373010 CCNI2Q6ZMN8 369 aaPredicted RBP20.46■□□□□ 0.87
USP49-202ENST00000373010 TRMT1LQ7Z2T5 733 aaKnown RBP20.46■□□□□ 0.87
USP49-202ENST00000373010 CTNND1O60716 968 aaKnown RBP20.45■□□□□ 0.86
USP49-202ENST00000373010 GFPT2O94808 682 aa20.45■□□□□ 0.86
USP49-202ENST00000373010 MYCLP12524 364 aaPredicted RBP20.45■□□□□ 0.86
USP49-202ENST00000373010 PAFAH1B1P43034 410 aa20.45■□□□□ 0.86
USP49-202ENST00000373010 SLC7A5Q01650 507 aa20.45■□□□□ 0.86
USP49-202ENST00000373010 GHRHRQ02643 423 aa20.45■□□□□ 0.86
USP49-202ENST00000373010 GPS2Q13227 327 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms