RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 CCDC170Q8IYT3 715 aa27.45■■□□□ 1.98
CTSA-203ENST00000372459 GOLGA5Q8TBA6 731 aa27.45■■□□□ 1.98
CTSA-203ENST00000372459 GBP3Q9H0R5 595 aa27.45■■□□□ 1.98
CTSA-203ENST00000372459 GABBR1Q9UBS5 961 aa27.45■■□□□ 1.98
CTSA-203ENST00000372459 PPP1R37O75864 691 aa27.44■■□□□ 1.98
CTSA-203ENST00000372459 XRCC5P13010 732 aaKnown RBP27.44■■□□□ 1.98
CTSA-203ENST00000372459 ICAM3P32942 547 aa27.44■■□□□ 1.98
CTSA-203ENST00000372459 OTUD6AQ7L8S5 288 aa27.44■■□□□ 1.98
CTSA-203ENST00000372459 POTEB2H3BUK9 544 aa27.44■■□□□ 1.98
CTSA-203ENST00000372459 SLC25A27O95847 323 aa27.44■■□□□ 1.98
CTSA-203ENST00000372459 ARHGAP29Q52LW3 1261 aa27.44■■□□□ 1.98
CTSA-203ENST00000372459 CACNA2D4Q7Z3S7 1137 aa27.44■■□□□ 1.98
CTSA-203ENST00000372459 KSR1Q8IVT5 923 aa27.44■■□□□ 1.98
CTSA-203ENST00000372459 TMEM150BA6NC51 233 aa27.43■■□□□ 1.98
CTSA-203ENST00000372459 CNMDO75829 334 aa27.43■■□□□ 1.98
CTSA-203ENST00000372459 AFPP02771 609 aaKnown RBP27.43■■□□□ 1.98
CTSA-203ENST00000372459 OSBPP22059 807 aa27.43■■□□□ 1.98
CTSA-203ENST00000372459 CASQ1P31415 396 aa27.43■■□□□ 1.98
CTSA-203ENST00000372459 PLA2G4FQ68DD2 849 aa27.43■■□□□ 1.98
CTSA-203ENST00000372459 SH2D3AQ9BRG2 576 aa27.43■■□□□ 1.98
CTSA-203ENST00000372459 LSM14BQ9BX40 385 aaKnown RBP27.43■■□□□ 1.98
CTSA-203ENST00000372459 L2HGDHQ9H9P8 463 aa27.43■■□□□ 1.98
CTSA-203ENST00000372459 NHEJ1Q9H9Q4 299 aaPredicted RBP27.43■■□□□ 1.98
CTSA-203ENST00000372459 CEP72Q9P209 647 aa27.43■■□□□ 1.98
CTSA-203ENST00000372459 GRIN3BO60391 1043 aa27.42■■□□□ 1.98
CTSA-203ENST00000372459 PSMC2P35998 433 aaKnown RBP27.42■■□□□ 1.98
CTSA-203ENST00000372459 CASP4P49662 377 aa27.42■■□□□ 1.98
CTSA-203ENST00000372459 ACTR2P61160 394 aa27.42■■□□□ 1.98
CTSA-203ENST00000372459 ANO5Q75V66 913 aa27.42■■□□□ 1.98
CTSA-203ENST00000372459 TRMT1LQ7Z2T5 733 aaKnown RBP27.42■■□□□ 1.98
CTSA-203ENST00000372459 SYCP3Q8IZU3 236 aa27.42■■□□□ 1.98
CTSA-203ENST00000372459 MKNK1Q9BUB5 465 aa27.42■■□□□ 1.98
CTSA-203ENST00000372459 TMEM206Q9H813 350 aa27.42■■□□□ 1.98
CTSA-203ENST00000372459 AGPAT3Q9NRZ7 376 aa27.42■■□□□ 1.98
CTSA-203ENST00000372459 KIF5CO60282 957 aa27.42■■□□□ 1.98
CTSA-203ENST00000372459 COPB2P35606 906 aa27.42■■□□□ 1.98
CTSA-203ENST00000372459 NPEPPSP55786 919 aa27.42■■□□□ 1.98
CTSA-203ENST00000372459 KRT83P78385 493 aa27.42■■□□□ 1.98
CTSA-203ENST00000372459 MOGSQ13724 837 aa27.42■■□□□ 1.98
CTSA-203ENST00000372459 SWSAP1Q6NVH7 229 aa27.42■■□□□ 1.98
CTSA-203ENST00000372459 MIS18BP1Q6P0N0 1132 aa27.42■■□□□ 1.98
CTSA-203ENST00000372459 RRAGAQ7L523 313 aa27.42■■□□□ 1.98
CTSA-203ENST00000372459 BAP1Q92560 729 aa27.42■■□□□ 1.98
CTSA-203ENST00000372459 LDLRAD1Q5T700 205 aa27.41■■□□□ 1.98
CTSA-203ENST00000372459 SLC17A8Q8NDX2 589 aa27.41■■□□□ 1.98
CTSA-203ENST00000372459 WDR24Q96S15 920 aa27.41■■□□□ 1.98
CTSA-203ENST00000372459 NUCKS1Q9H1E3 243 aaKnown RBP27.41■■□□□ 1.98
CTSA-203ENST00000372459 WDR81Q562E7 1941 aa27.41■■□□□ 1.98
CTSA-203ENST00000372459 A0A0U1RQJ8 604 aa27.4■■□□□ 1.98
CTSA-203ENST00000372459 LRRC53A6NM62 1247 aa27.4■■□□□ 1.98
CTSA-203ENST00000372459 SP4Q02446 784 aa27.4■■□□□ 1.98
CTSA-203ENST00000372459 DCAF17Q5H9S7 520 aaPredicted RBP27.4■■□□□ 1.98
CTSA-203ENST00000372459 PDXDC1Q6P996 788 aa27.4■■□□□ 1.98
CTSA-203ENST00000372459 ABHD15Q6UXT9 468 aa27.4■■□□□ 1.98
CTSA-203ENST00000372459 FAM186BQ8IYM0 893 aa27.4■■□□□ 1.98
CTSA-203ENST00000372459 ATRIPQ8WXE1 791 aa27.4■■□□□ 1.98
CTSA-203ENST00000372459 CRACR2AQ9BSW2 395 aa27.4■■□□□ 1.98
CTSA-203ENST00000372459 IKZF4Q9H2S9 585 aa27.4■■□□□ 1.98
CTSA-203ENST00000372459 ST6GALNAC4Q9H4F1 302 aa27.4■■□□□ 1.98
CTSA-203ENST00000372459 DMAC2Q9NW81 257 aa27.4■■□□□ 1.98
CTSA-203ENST00000372459 FANCGO15287 622 aa27.4■■□□□ 1.98
CTSA-203ENST00000372459 IPO7O95373 1038 aaKnown RBP27.4■■□□□ 1.98
CTSA-203ENST00000372459 EDNRBP24530 442 aa27.4■■□□□ 1.98
CTSA-203ENST00000372459 FAM102BQ5T8I3 360 aa27.4■■□□□ 1.98
CTSA-203ENST00000372459 CEP170P1Q96L14 293 aa27.4■■□□□ 1.98
CTSA-203ENST00000372459 ACCSQ96QU6 501 aa27.4■■□□□ 1.98
CTSA-203ENST00000372459 FRMD4BQ9Y2L6 1034 aa27.4■■□□□ 1.98
CTSA-203ENST00000372459 REXO2Q9Y3B8 237 aaKnown RBP27.4■■□□□ 1.98
CTSA-203ENST00000372459 DOCK5Q9H7D0 1870 aa27.4■■□□□ 1.98
CTSA-203ENST00000372459 EIF3CLB5ME19 914 aaKnown RBP27.39■■□□□ 1.98
CTSA-203ENST00000372459 ZNF862O60290 1169 aa27.39■■□□□ 1.98
CTSA-203ENST00000372459 NOL4O94818 638 aa27.39■■□□□ 1.98
CTSA-203ENST00000372459 SP2Q02086 613 aa27.39■■□□□ 1.98
CTSA-203ENST00000372459 FSTL1Q12841 308 aa27.39■■□□□ 1.98
CTSA-203ENST00000372459 MYBPC2Q14324 1141 aa27.39■■□□□ 1.98
CTSA-203ENST00000372459 TCERG1LQ5VWI1 586 aa27.39■■□□□ 1.98
CTSA-203ENST00000372459 SLC9A9Q8IVB4 645 aa27.39■■□□□ 1.98
CTSA-203ENST00000372459 BORCS6Q96GS4 357 aa27.39■■□□□ 1.98
CTSA-203ENST00000372459 CCDC42Q96M95 316 aa27.39■■□□□ 1.98
CTSA-203ENST00000372459 EIF3CQ99613 913 aaKnown RBP27.39■■□□□ 1.98
CTSA-203ENST00000372459 SOWAHBA6NEL2 793 aa27.39■■□□□ 1.97
CTSA-203ENST00000372459 SUPT20HL2P0C7V6 817 aa27.39■■□□□ 1.97
CTSA-203ENST00000372459 SNAPC2Q13487 334 aa27.39■■□□□ 1.97
CTSA-203ENST00000372459 SEPT14Q6ZU15 432 aa27.39■■□□□ 1.97
CTSA-203ENST00000372459 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.39■■□□□ 1.97
CTSA-203ENST00000372459 CCDC60Q8IWA6 550 aaPredicted RBP27.39■■□□□ 1.97
CTSA-203ENST00000372459 FAM133AQ8N9E0 248 aa27.39■■□□□ 1.97
CTSA-203ENST00000372459 SLC35C1Q96A29 364 aa27.39■■□□□ 1.97
CTSA-203ENST00000372459 ARID3AQ99856 593 aa27.39■■□□□ 1.97
CTSA-203ENST00000372459 RBPJLQ9UBG7 517 aa27.39■■□□□ 1.97
CTSA-203ENST00000372459 CLEC11AQ9Y240 323 aa27.39■■□□□ 1.97
CTSA-203ENST00000372459 STBD1O95210 358 aa27.38■■□□□ 1.97
CTSA-203ENST00000372459 SLU7O95391 586 aaKnown RBP27.38■■□□□ 1.97
CTSA-203ENST00000372459 GPAT2Q6NUI2 795 aa27.38■■□□□ 1.97
CTSA-203ENST00000372459 SLC10A4Q96EP9 437 aa27.38■■□□□ 1.97
CTSA-203ENST00000372459 IRX2Q9BZI1 471 aaPredicted RBP27.38■■□□□ 1.97
CTSA-203ENST00000372459 GPRC5CQ9NQ84 441 aa27.38■■□□□ 1.97
CTSA-203ENST00000372459 CGNQ9P2M7 1197 aaKnown RBP27.38■■□□□ 1.97
CTSA-203ENST00000372459 SRCAPQ6ZRS2 3230 aa27.37■■□□□ 1.97
CTSA-203ENST00000372459 URI1O94763 535 aaPredicted RBP27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms